Carassius auratus (goldfish): 113050334
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Entry
113050334 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113050334
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113050334
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113050334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
Sina_ZnF
Prok-RING_4
zf-rbx1
zf-TRAF
U-box
TRAF3_RING
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
113050334
NCBI-ProteinID:
XP_026068982
Ensembl:
ENSCARG00000064823
UniProt:
A0A6P6KCY4
LinkDB
All DBs
Position
31:6514643..6604798
Genome browser
AA seq
1050 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLDIKCDNHARGCQTIVKLQHLAEHAEMCDYSPARCRNKGCSEVL
NLKDMDAHMRESCECRAVGICESGCGLMLTHREQKLDNHCCLKALKAHNGALQGKVVSLD
KELKKQALKSTKREKSLLAQLSAVHNELQMTALKYQKKFTEYSSRIDSLSKSLSPPCKGG
ETKSVMAILHRESGSLGFNIVGGRPCADDKDGNSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKATHDQAVEAFRMAKEPIMVQVLRRAPKPKPTGPSGEAQVMDISTQTDIT
FQHIMALSKLPTSSPPVNVLEQYLLPEGHSPAHEYFDPNDFLEGMQHEIEREELEYEEVD
LYRTNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGFEIQNH
EEAVALLTSEEHPNVCLLLARPEIQLDEGWMDDDRNDYLDDLHMDMLEQQHHQAMQFTAS
MIQQKKHEEDGGTTDTATLLSHHHEKDSGVGRTDDSTRNDESSEQENLADDQTSTSTTLG
SRRRLAYSQDTLGSGDLPFSSESFISADYADADFLGDFPADECERFRELLELKCQMRSVG
ISGTPEQSLFWPSGGGQGSVGEEGVDKELELLNEELRSIELECLSIVRAHRMQQLREQCR
EQSWMLHNSGFRNYNTSVDARRHELADISELPEKSDKDSSSAYNTGESCRSTPLTLELSP
DNSLRRGNENQVGVCSGTLGANRILKPLLSPVQEACSPNRSRPTLSKVSEAGTQSEIRER
KTGRHAQPQSPYKHAHIPAHAQHYQSYMQLIQQKSVEYAQSQMSLVSLCRDPVASADLGP
KMEWKVKIRSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAISEMKMGRYWSKEE
RKQHAVRAKEQRQRREFMKQSRMDCLKEQVGSTEDKKELNIIELSNKKMMKKRSKKIFDN
WMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagttggatcgtttcaagggggctgtggacccagacttcaaatgcaacttg
tgtaataaagttttggaggatccgctcaccaccccttgcggtcacgtcttctgcgccggc
tgtgtgctgccgtgggtcgtccagcagagcagctgcccggtcaaatgccaaaggatctcc
accaaagagctcaaccacgtcctccctctgaaaaacttaatattaaagttagacattaaa
tgtgacaatcacgcgcggggctgccagacgatcgtcaaactccagcatctggcggagcac
gcggagatgtgcgattattcccctgccagatgtaggaataagggctgcagcgaagtgctg
aacctcaaagatatggatgctcacatgcgtgaatcgtgtgagtgcagggcggtcgggata
tgcgagagtggatgcggattgatgctcactcatagggagcagaagttggacaaccattgc
tgcttgaaagccctcaaagcgcacaacggcgcgctgcaagggaaagttgtcagcttggat
aaggagctgaagaaacaagctctcaaatcgactaaaagagagaaatcacttttggctcaa
ctgtcggctgttcataacgagcttcagatgacagcgctgaagtatcagaagaaattcact
gaatacagctccaggattgactcgctgtccaagagtctttctccgccgtgtaagggtgga
gagaccaaaagtgtcatggctatactccatcgtgagtctggatctttaggcttcaatatc
gttggaggaaggccatgtgcagacgataaagatggcaattcaaatgaaggaatctttgta
tcgaagattgtggagaatggaccagcggataaagaagggggattgcagatccatgaccgg
ataatggaggtcaatggaaaggacttgtcaaaggcgacgcacgaccaggctgtggaggcc
ttccgtatggctaaagagcccattatggtccaggtgctacgccgggctcccaagcccaaa
cctacaggcccaagtggggaagcgcaggtaatggacatcagcacccagaccgacatcacc
ttccagcatataatggcgctcagcaagctgcctacgtcctccccgcctgtgaatgtgctt
gagcagtacctgctgccagaggggcactctcctgctcatgaatacttcgaccctaatgat
ttcctagagggcatgcagcatgagatagaaagagaagagctggaatatgaggaagtggat
ttatacagaactaatatccaggataaactggggttaactgtgtgctacagaacagatgat
gaggatgagactgggatctatgtcagtgagattgatccgaacagcattgcagcaaaagat
ggacgaattcgagagggagatcgaatcatccagatcaatggctttgagatccagaaccac
gaggaagcagtggctcttttaaccagtgaagaacatccaaatgtatgcctgctattggct
cgaccagagatacaactggatgagggctggatggatgatgacagaaacgactacctggat
gacctccacatggatatgttagagcaacagcaccatcaggccatgcagttcacagcaagc
atgatccagcagaagaagcacgaggaggatggaggtacaacagacactgccacgctgctc
tcccaccatcatgagaaggacagtggagtgggccgcacagatgacagcactcgtaacgat
gagagttctgagcaagagaatctcgcagatgatcagaccagcacctccaccacactaggc
agccggcgcaggctcgcatacagtcaggacaccctaggaagtggcgacctcccgttcagc
agcgagtccttcatttctgcggactatgcagacgcggacttcttgggcgactttcctgct
gacgaatgcgagcggtttcgtgagcttttggagctcaagtgccagatgcggagcgtgggc
atcagcggtaccccggagcagagcttgttctggcccagtggtggcggacagggcagcgtt
ggcgaggagggtgtcgacaaagagctggagcttctgaatgaggagctccgcagcattgag
ctcgagtgcctgagcatagtccgagcacatcgcatgcagcagttgcgtgagcagtgccgc
gaacagtcctggatgctccacaacagcggcttccgaaactacaacacaagtgtggatgca
aggcgccatgaactagcggacatcagcgaactcccagagaagtctgacaaggacagctcc
agcgcatacaacacgggtgaaagttgccgtagcacaccactcacgctagagctttccccg
gacaactccttgaggcgtggaaatgaaaatcaagtgggggtttgtagtgggacgttgggt
gccaacagaatcctcaaacctcttctgtctcccgtccaagaggcttgcagtcctaacaga
agtcgtccaaccttgtcaaaagtgtccgaggctggaacccagtctgaaattcgagaacgc
aaaactggtcgccatgcccagccccaatcgccctacaaacatgcccacatcccggcccac
gcccagcactaccagagctacatgcaactgatccagcaaaagtcagtggagtatgcccaa
agccaaatgagcctagtcagcttgtgccgggaccccgtcgcttctgctgacttgggtccc
aagatggaatggaaagtgaagatccgcagcgatggtacgcgttacattaccaagcggcct
gtccgggacaagctcctgaaagagcgagccctacggatccgagaggagcgcagcgggatg
actacagacgatgatgccatcagcgagatgaagatgggacgctactggagcaaagaggag
cggaagcaacatgccgtccgtgccaaagagcagcgtcagcgcagggaatttatgaagcag
agccgtatggactgtctgaaggagcaagtgggcagcactgaagacaagaaggagctcaat
attattgaactgagtaacaaaaagatgatgaagaagcggagcaagaaaatctttgacaat
tggatgactatccaggaactgttgacccatggtacgaagtcccccgatgggacacgagtg
tacaactccctactgtcagtgaccacggtttag
DBGET
integrated database retrieval system
