Carassius auratus (goldfish): 113050338
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Entry
113050338 CDS
T07313
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113050338 (shq1)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
113050338 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Leuk-A4-hydro_C
RRN3
Sporozoite_P67
DDHD
Motif
Other DBs
NCBI-GeneID:
113050338
NCBI-ProteinID:
XP_026068988
Ensembl:
ENSCARG00000017391
UniProt:
A0A6P6K9D1
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All DBs
Position
31:6636452..6665237
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AA seq
593 aa
AA seq
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MITPAFELSQDADFLTIVIRVPYTRTSEFDIYIQGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASFDIDKGLFTLHVPKETPGEHFEGLEMLTSLLAPKGSRSAKPLVEDTEACGGVCEEE
EEEEEEFDWQIEQEVYTETPAETLKEYHKYGFGNLRSGVFARLQEELNEVIDLKDPDNTA
PELRRHNRLEAETTIFCADHYMVNLYEDEEEIRNLLKFKPWWRELSPDPSAQSDTSITFT
EEEKEQMRKFTNRSYLLDKKARFHVWLGLVDIILAYVYDVRTTEGEHNVESAWTIRKLSG
TLSWLETYHSVQDVLVSFGRRTLCYPLYRHFSLITRAVKDVACIFQSGKACVLKCLLAIH
KIFRENDPAYILNDLYITDYCIWIQRVKSKHVLDLAESLHNAKLQKNHLDLELEILEQAA
ELAMKEEADEEEEEEEEEDSSSGSDSEDEEESEEEQPEITHPEEKMENNQTGLRTLETVV
ELQREGGESREPRQLIEELGERLEAGLTIREDVPRERPSISSSNTEGEGERKSEGDYNHQ
RTAETVRDDTKAAASRELLDVCLQRNPLRIISNDELDSDDDGNLLLTVGKEGP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgataacaccagcatttgaactgagtcaagatgctgatttccttacgatagttattcgt
gtaccctacaccagaacatctgagtttgacatctacatccagggggaagattttaagttc
tatgccaagccctactttctcagattgactcttcctgggagaatagtagaagatggccgg
gaaaaagcttcatttgatatcgataaaggcctcttcacgctgcatgtccctaaagagacg
cccggagagcactttgaaggtttggagatgctcaccagtctcttggctcctaagggatca
aggtcagccaaaccactggtggaggacacagaggcctgtggtggagtatgtgaggaggaa
gaagaagaagaggaggagtttgattggcagatagaacaggaggtttacaccgaaacccca
gcagagacgctgaaagaataccacaagtatggctttggaaaccttaggtctggagtcttc
gccagactgcaagaggaactgaatgaggtgattgacttgaaggatcctgacaacactgct
cctgagctcaggagacacaatcgactagaagcagagaccacaatattctgcgccgaccat
tacatggtgaacttgtatgaggacgaggaggagatcagaaacctgctgaagtttaaaccg
tggtggagagagctgagcccggacccttcagcgcagtccgacacctcaataactttcaca
gaagaagaaaaagagcagatgaggaaattcacaaaccgttcgtacttgctggataagaaa
gcacgcttccacgtctggcttggtttggtggacatcattctcgcgtatgtctatgatgtg
cgcactacagaaggagagcacaatgtagagtcagcctggaccatcaggaagctcagtggt
actctcagctggctggagacatatcactcggttcaagacgtgctggtgtctttcggcagg
aggactttgtgctacccactctaccggcacttctctctgatcacaagagctgtgaaagac
gttgcttgcatttttcagtccgggaaggcctgcgtcctgaaatgtctgctggccatccat
aagatcttccgagagaatgatccggcatatatcctcaatgacctctacatcacagactac
tgcatctggatccagagggtcaagtccaagcatgtgctagatctggctgaatccctacat
aatgccaaactgcagaagaaccatctagacctggagctggagatactcgaacaagctgct
gaacttgcgatgaaggaggaagcagatgaagaagaagaagaggaggaggaggaggactca
agcagtggtagtgactcggaggatgaggaagagagtgaggaagagcagcctgaaataaca
caccctgaagaaaagatggaaaataaccaaacgggactcagaactcttgaaactgtagtt
gagctccagcgtgaaggtggagagtcgcgagagcccagacagttgattgaggagttggga
gagaggctggaggcggggctgacgattcgggaggatgtgcctcgggagagaccctctatt
agcagcagtaacacggagggagagggagagagaaagagcgagggagactataaccatcag
cgtacagctgagactgtaagagacgacacgaaagcagcagccagtagagagctacttgat
gtgtgccttcagaggaatccactgcgtatcataagcaatgatgaactggacagtgacgat
gatggaaacctacttctaacagtgggaaaagaaggaccttag
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