Carassius auratus (goldfish): 113050370
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Entry
113050370 CDS
T07313
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113050370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113050370
03036 Chromosome and associated proteins [BR:
caua03036
]
113050370
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113050370
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113050370
PBAF complex
113050370
GBAF(ncBAF) complex
113050370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113050370
NCBI-ProteinID:
XP_026069065
Ensembl:
ENSCARG00000038538
UniProt:
A0A6P6KAW9
LinkDB
All DBs
Position
31:7424660..7439857
Genome browser
AA seq
1034 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPIKCFFDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGSVTEDKLSSSHVVVP
IPVSLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGGPRRKRISAKTLTDEVSAPDEKRDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQQMLSFPDKIKDKPADLQNFGLRTDVYSKKSGPTKTKNAASATREWTD
QETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAYQP
VPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEDAA
RSSGRPDPLYGLEGSGIAGTGLEDSDKPSEDGSEENKNSDGQSSQDKRENKESKDGASEE
EEKQGENGKKEEERVREGETDRETEKTDSEMADGEKEKEQKEGLEEGQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHHSSQPANQSG
STPSVTHQPATNASGPPPTQSPASVSATNALNEAPPPTSRSSPPTIAQTGAAHDSSTPLA
GDSLYPNAPVPPTQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccccaccaataaatctttgtcaagtctggtggttcagctccttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactagactaccgataaagtgt
ttttttgattttaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcatgactatagaaaagtccttggtgcagaataactgcttgtcccgacct
gtgatttacctgagttcagagatagagcccaagctgctgggaaaactgaaggacatcatc
aaacgacaccagggatctgtgactgaagataagctgtccagctctcatgtagtggtgcct
attcctgttagtctggaggacgaagagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctactggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattctggacctggatcagtttaatgagtggatgaatgaggaagactatgaggtggga
gaaggaggaccgcggaggaagagaatttcagcaaagactctcacagatgaagtgagcgct
ccagatgaaaagagggataaaaaacccagcagtgccaaaaaaaggaagcgctccccgtct
ccatctcctacccctccaccacaggagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacagagagaggaagaacaggaagatctgactaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgtagggaaggaggaagaagaaggttctccgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
cacatcattatacctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagagcactgcctgagtttttcaatgggaaaaacaagtcaaagacacctgaaatttac
ctggcataccgtaacttcatgattgacacgtacagactgaacccacaggagtatttgacc
tctacagcatgccgtaggaacctggctggagatgtttgtgccattatgagggtccatgcc
tttctggaacagtggggcttgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcatcctctcagcagatgctctcattcccagac
aaaatcaaggacaaaccagctgacttgcagaactttgggttaaggacagatgtgtacagt
aagaagagcggcccaactaaaactaaaaatgctgccagtgccactcgagaatggacagac
caggagacactgctactgctggagggtctagagatgtataaagatgactggaataaagta
tcggaacacgtgggcagccgcacacaggatgagtgcatcctccacttcctgcgtctaccg
atcgaagacccctacctggaggatagctcctcctccctaggcccgctggcctatcagcca
gttccgttcagtcaggcggggaatcctgtcatgagcacggtggcattcctggcctctgtg
gttgaccctcgagtggcttctgctgcggctaaatcagcacttgaggagttctctcgaatg
aaggaggaggtaccagctgcgctggtggaggctcatgtgcgtcgagtggaggatgcggcc
agatcaagcgggagaccagaccctctctacggcctggagggcagcggcatagcaggaacc
ggtcttgaggattctgacaaaccctctgaagatggaagtgaggagaataaaaacagtgat
ggtcagtctagccaagataaaagagaaaataaggagagcaaagatggagccagtgaggag
gaagaaaaacaaggagagaacggcaagaaagaggaagagagagtgagagaaggggagacg
gacagagagacagagaaaacagactcagaaatggctgatggcgagaaggagaaagaacag
aaggaggggttggaagagggtcagagggatggagagagcgagggggagaagaaagcaaag
gtggagagagatgtaggagagggaaacctggccactgccgctgcttcagcactcgctgct
gctgccgtcaaagctaagcacttggcagcagtagaggaaaggaagatcaagtctctggtg
gctctgctggtggagacccagatgaagaaactggagatcaaactccgacactttgaagag
ttggaaaccatcatggacagagagagagaggcactagagtatcagaggcagcagcttctt
gctgatcgtcagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacag
caacacttccagcagatccaacaccagcaccatagcagccagcctgccaatcagtctggc
agtactccatctgtaacccaccagcctgccactaatgcctctggcccgcccccaacacaa
agccccgcctctgtgagcgccactaatgccctcaatgaagctccaccacccacctctcgc
agttctcccccgaccatcgcacagactggagcagcgcatgattccagcactccactagca
ggggattctctgtatccaaatgcccctgtgcctccaacacagtaa
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