Carassius auratus (goldfish): 113050632
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Entry
113050632 CDS
T07313
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04136
Autophagy - other
caua04140
Autophagy - animal
caua04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113050632
04140 Autophagy - animal
113050632
04136 Autophagy - other
113050632
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113050632
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113050632
03029 Mitochondrial biogenesis [BR:
caua03029
]
113050632
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
113050632
Membrane trafficking [BR:
caua04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113050632
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113050632
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
113050632
NCBI-ProteinID:
XP_026069612
Ensembl:
ENSCARG00000069965
UniProt:
A0A6P6KET3
LinkDB
All DBs
Position
31
Genome browser
AA seq
394 aa
AA seq
DB search
MDAATLTYDSLRFGEIEDFPETSEPVWILGKQFSALTEKEEILGDVTSRLWFTYRRNFQP
IGGIGPTSDTGWGCMLRCGQMILGQALICRHLGRDWRWSPGQRQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDSWSRLAVHVAMDNTVVIEEIK
RLCMPWLDFDRGACAVSEEPLEMNGDLEGACALVEEETALWKPLVLLIPLRLGLSDINEA
YIEPLKQCFMMPQSLGVIGGKPNSAHYFIGFVGDELIYLDPHTTQPAVDPNEDGQFPDDS
YHCQHPPCRMHICELDPSIAAGFFCQTEDDFDDWCAQIRKVSNCRGLPMFELVDSQPSHL
ISADVLNLTPDFSDSDRLARFFDSEDEEFEILSL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacatatgactcgttgcgctttggagagatcgaagatttccca
gagacctccgagcctgtctggattttgggaaagcagttcagcgctctaacagagaaggaa
gagattctgggagatgtcacctcacgcttgtggttcacgtacagaaggaactttcagcca
attggtggcattggtcccacttcagacactggttggggctgcatgcttcgatgtggacag
atgattcttgggcaggccttgatctgcaggcacttaggtagagactggagatggagtcca
ggtcagcggcagagagaagaatatatcagtattctcaatgccttcattgacaagaaggac
agctattattccatccatcaaatagctcaaatgggtgttggtgagggcaagtctataggc
cagtggtatggtccaaatacagttgcacaggtactcaaaaaactggcagtttttgactcc
tggagccgactggcagttcatgtagctatggataatactgtggtcatagaggaaatcaag
aggttgtgtatgccgtggctggacttcgacaggggtgcatgtgcggtttctgaagagcct
ctggaaatgaatggtgatctggagggggcttgtgctctggtagaagaggagacggctctg
tggaaaccccttgttctgctgattccactaagacttggcctcagtgacatcaacgaagct
tatattgaaccactcaagcaatgcttcatgatgcctcagtctttgggagtaataggtggg
aagccgaacagtgctcactacttcattggctttgtaggtgatgagctcatttatctagac
ccccataccactcagccggctgtggacccaaatgaagatggacagttcccagacgactcc
taccactgccagcaccctccctgccgaatgcacatctgtgagcttgacccctccattgcc
gctggcttcttctgtcaaacagaggatgattttgatgactggtgtgcacaaattcgtaag
gtttcaaactgtagaggtcttcctatgtttgaattggtagacagtcagccatctcatcta
ataagcgcagatgtacttaatctcactccagacttctcggattcagacaggctcgcacgc
ttctttgattccgaggatgaagaatttgaaatcctgtctttgtga
DBGET
integrated database retrieval system
