KEGG   Carassius auratus (goldfish): 113050713
Entry
113050713         CDS       T07313                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113050713 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113050713 (rae1)
   03036 Chromosome and associated proteins [BR:caua03036]
    113050713 (rae1)
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113050713 (rae1)
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113050713 (rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 113050713
NCBI-ProteinID: XP_026069748
Ensembl: ENSCARG00000034635
UniProt: A0A6P6KBZ3
LinkDB
Position
31:17688782..17705154
AA seq 369 aa
MSLFGTNTGFGSGGTGVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
IQIAQHEGPIRTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttattcgggacgaacacgggctttgggtccgggggaacaggtgtatttggcaac
accaccacagacagtcataatccaatgaaggatgttgaagttacatctccacccgatgac
agcataagctgcttggcattcagtcctcctacaatgcctggaaactttctcattggaggc
tcatgggccaatgacgtgcgttgctgggaggttcaagataatggtcagactgtccctaaa
gcccagcagatgcacacaggtccagtgctggatgtgtgctggagtgatgatggcagtaaa
gtctttacagcctcctgtgacaaaactgccaagatgtgggatctgaacagcaatcagacc
attcagatagcacaacatgaaggcccaatcaggacaattcactggattaaagctccaaac
tacagctgtgttatgactgggagctgggacaagacactgaagttttgggatacacgttcc
ccaaatcccatgatgtctctgcagatgccagagaggtgttactgtgcagatgtggtatat
cctatggccgttgtagccactgcagaacgtggtctcattgtttaccagttggaaaatcag
ccttcagagtttcgacgaatagagtcacctctgaagcatcagcaccgctgtgtggctatc
tttaaggacaagcagagtaaacctactggttttgcactgggcagtattgagggacgagtt
gccattcattacataaatccacctaacccagccaaggacaatttcacctttaagtgccac
aggtccaatggaaccaatactgccacaccccaagatatttatgctgtgaatgctatctcc
tttcaccctgtccatggcactctggcgacagtaggatctgatgggcgcttcagtttctgg
gataaagatgcccgcactaagctgaagacctctgaacaattagatcaaccaataacagct
tgttgcttcaataacaatgggaacatatttgcctatgcttccagctatgactggtctaag
ggacatgaatattacaatccccagaaaaagaattacatcttcttgaggaatgcggctgag
gaactgaagcctcggaacaagaaatggtga

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