Carassius auratus (goldfish): 113050845
Help
Entry
113050845 CDS
T07313
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113050845
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113050845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
OPA1_C
RhlB
FUT8_N_cat
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
113050845
NCBI-ProteinID:
XP_026070005
Ensembl:
ENSCARG00000012923
UniProt:
A0A6P6KDE6
LinkDB
All DBs
Position
31:21970449..22010375
Genome browser
AA seq
1999 aa
AA seq
DB search
MAAQLLVPPGPDSFRRFLPESLAAIERRIAEEAAQRPKGERRPDDDDENGPKPNRDLEAG
KSLPFIYGDIPPEFVSVPLEDLDTYYSNQNTFIVLNRGKTIFRFNATPALYILSPFNPLR
RISIKVLVHSMFSLVIMCTILTNCAFMTLNNPPEWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKMPEVNVTENLTATLNYSAG
LEQNNTFNWTVYSSNERNYYFLPGRRDPLLCGNSSDAGQCPEGFMCIKVGRNPDYGYTSF
DTFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGGLSEESSSGG
SRLSSKSAKERRNRRKKRKQREEEEKADQEKFHKSISEDSIRRPGFRFSIDANRLSYEKK
CSTPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSL
FVPHCIERRSSTVSHCSLAPRVMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPEG
TTTESEARKKRSGSHQPSDYLDETVTRKRAMSVASILTNTMEELEESRQKCPPCWYKFAN
SFLIWDCCPAWLKVKRIVKMVVMDPFVDLAITICIVLNTLFMAMEHYPMTEGFNHVLSVG
NLVFTGIFTAEMCLKVIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKI
AEDCELPRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLVV
LNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGIALVKSTLRQFLQSLCLAGSK
PCALDEEKPLDDLHSDGKENCLSNHVSVAVDLTKDYLKEGCISPGNGVEGHVKYGIEEGD
YMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDAVLSSSEGSTVD
IRPPGEGVESVELEPEESLDPEACFTEGCVMRFQCCQVDVETGKWKSWWTLRKTCFFIVE
HNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILEMLLKWVAYGF
TKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVV
VNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNISSDEMFPISVVNNKSEC
LALIANNDTARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQPEREKN
LYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPANKFQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTKDMDNILYWI
NLVFIILFTGEAVLKMISLRQYYFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVSPTLFR
VIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFAMSNFAYVK
REAGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSEMEHPGSLYRGNC
GNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFD
PNATQFVEYSKLSEFADALDPPLRIAKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVL
GEEGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSSVIIQRAFRRYRLRQMIK
KASEAYRKQLQDGEVRILEKEVLVIGKFQENSASDKTDMTLSSASPPSYNSVAKSEKDKY
EKERRDKEDKAKDARDRKK
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctgctcgttccacccggacctgacagcttccggcgcttcttgcctgag
tctctcgctgctatcgagcgccgcatcgcagaggaggctgcccaacggcccaaaggtgag
agacggcctgatgatgatgatgaaaacgggcccaagcccaacagagacttggaggcggga
aaatccctgcccttcatctacggagacattccacccgaatttgtgtccgtcccactggaa
gacctggacacctactacagcaaccaaaatacctttatagtattgaatcgtgggaagact
atattccgctttaatgctacgccggctttgtatattttgagccccttcaatccattgagg
agaatctccatcaaggtcctggtgcattcaatgttcagtcttgtgatcatgtgcacaatc
ttgaccaattgcgccttcatgaccctcaacaatcccccggagtgggccaagaatgtggag
tacacgttcacagggatctacacctttgagtccctgataaagatcctggcccggggcttc
tgcgtggggaagttcactttcctgcgagacccctggaactggctggatttcagtgtcatt
ctgatggcatatgtaacagaatttgtggatctgggcaatgtctcagcactgagaaccttc
agagttttacgagcactcaaaactatatcagtgattccagggctgaagactatcgttggc
gctctgatccagtccgtgaagaagctgtcagacgtgatgatcctgactgtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagatgccggaggtcaatgtcactgaaaacctgaccgccacactgaactatagcgccggt
ttagagcagaacaacacctttaactggactgtatacagtagtaatgagagaaattattat
ttcctcccaggccgcagagatcctttgctatgtggaaattcgagcgatgcagggcagtgt
ccagagggcttcatgtgtataaaagtaggtcgtaatcctgactatggctacacaagcttt
gacacattcggctgggccttcctctcactcttccgactcatgacacaagacttctgggaa
aacctctaccagcagaccctgcgtgcagctggaaagccctatatgatcttctttgttctt
gtgatcttcctgggctccttctatctggtgaatctcatcctggccgtggtggccatggca
tatgacgagcagaaccaggccaccatagaagaggctcaacagaaagaggaagagtttcaa
gccatgctagaacagctcaagagacaacaggaagaggcacaggttgctgcggcagcagca
acggagagtggggagtacagcgggagggggggcttgtcagaggaaagctcctccgggggg
tccagactcagctccaagagcgccaaagagcgaaggaacaggaggaagaaaagaaaacaa
agggaagaagaagagaaagccgatcaggaaaagttccataagtccatctcagaggacagc
atcagacggcctggatttcgattctccatcgatgccaaccgactctcgtatgagaagaaa
tgttccactccaaaccagtctcttctcagcattcgtggatctctcttttcgccaaggagg
aacagtcgcgccagtctgttcagttttcgcggtagagcgcgagatttcggctcagagaat
gattttgcggatgatgagcacagcacatttgaggatagtgacagtcgccgcggctcgctc
ttcgtacctcattgtattgagagacgaagttccactgtcagtcactgcagccttgctccc
agagttatgctcccagccaacggaaaaatgcactgcacagtagattgcaatggagtggtc
tccctggtgggtgggacatctgtgccaacatcaccaatcggacgtttgttacctgagggc
acaaccactgagtctgaggcacgtaaaaaacgttcaggatcacaccagccgtctgattat
ctggatgagacagtaaccagaaaaagagctatgagtgtggccagcattctgacaaatact
atggaagaacttgaggaatcacggcagaagtgccctccatgttggtacaagtttgccaac
agcttcctgatctgggactgctgtccagcctggctgaaagtgaagaggattgtgaaaatg
gtggtgatggatccatttgtagacctggccataaccatttgcattgttctcaacaccctc
ttcatggctatggaacactaccctatgacagaaggattcaaccatgtgctgtcagtcggg
aacctggtattcactggaatcttcacagcagagatgtgtctgaaggtaattgctctagac
ccatattactacttccaacaaggctggaatatctttgatggcatcatcgtgagcctgagc
cttatggaactgggcctggccaatgttgagggactttctgtgctgcgatcttttagattg
ttaagagtctttaagctggcaaagtcttggcccacgctgaacatgctgataaagatcatt
ggtaactccgttggtgctttgggaaatctaaccctcgtcctagccatcatcgtcttcatc
tttgctgtggtgggaatgcagttgtttggaaagagctaccgtgagtgtgtctgcaagatc
gcagaagactgtgagttgccgcggtggcacatggatgatttcttccactccttcctgatt
gtgttccgagtgctttgcggtgaatggatcgaaaccatgtgggactgcatggaagtggcg
gggcagtcaatgtgtctcatcgtcttcatgatggtcatggtcattgggaatctggtggtg
ttgaatctgttcctggccttgctgctgagctctttcagtgccgataatctggccgccact
gatgacgacagcgaaatgaacaacctgcagatcgccgtgggcagaatacagaaaggtatc
gctttggtcaagtccactttacgccagtttctccaaagcctctgcctggccggctccaaa
ccttgtgctctagacgaagagaaaccccttgatgacctccacagtgacggcaaggagaat
tgcttgtccaatcacgtttcagtggccgtcgatctcactaaagactatctgaaggagggc
tgcatctcccctggcaatggggtggaaggtcacgtaaagtatgggattgaggaaggcgac
tacatgtcgttcatacacaatcccagcctcactgttacagtaccgattgcggtgggggag
tcggactttgaaaatctgaacacggaagatttcagtagtgactcatctgacgttgagggc
agtaaagagaagctgcctgttgatgcggttctcagttcttcagaaggtagtacagtggat
atccgaccccctggtgagggtgtggagtctgtggagctggagcctgaagagtccctggac
ccagaggcctgcttcacagaaggctgtgtgatgaggtttcagtgctgtcaggttgatgtg
gagacgggaaaatggaagagttggtggactctcaggaaaacctgcttctttattgttgag
cacaactggtttgagtcctttatcatctttatgatattactcagcagtggagcactggct
tttgaggacatttacatcgagcaacgtaaaacaataaagacagtgttggaatatgcagat
aaagtcttcacatacatctttatattggagatgcttctgaagtgggttgcgtacggcttc
accaaatacttcaccaacgcctggtgttggctcgacttcctgattgttgatgtgtcactg
gtgagtctggtagcaaatgctcttggttactctgaactaagtgccattaagtccctgaga
acactgcgtgctcttagacctttgagagcattgtcacgctttgaaggaatgagggttgta
gtgaatgccctgctgggagccatcccttccatcatgaatgtgctgctggtgtgtttgatt
ttctggctcatcttcagcatcatgggggtgaaccttttcgctgggaaatactatcattgt
gttaatatctccagcgatgagatgtttcccatcagtgtggtcaataacaagtcagaatgc
cttgccctgattgcaaacaatgacacagcacgatggaaaaacgtgaagattaatttcgat
aatgtgggagccggatacctggcgctactgcaagtggccacatttaaaggatggatggac
atcatgtatgcagctgtggattctcgtgatttggagcagcagcctgagagggaaaaaaac
ctttacatgtacctgtacttcgtcatcttcattatcttcggctccttctttacccttaac
ctcttcattggtgtcatcattgataatttcaatcagcagaagaaaaagctaggaggtcag
gatatcttcatgacagaagaacagaagaaatattacaacgccatgaagaaactgggatct
aagaagcctcagaagccaattcccaggcctgcgaacaagtttcaaggcctcatctttgac
tttatcaccaaacaagcctttgacattgtgattatgatcctgatctgcttgaacatggtg
accatgatggtggaaaccgacgatcagacaaaggatatggacaatattctgtactggata
aacctggttttcatcatcctcttcactggagaagctgttctcaagatgatctccctgcga
caatactacttcaccattggctggaatgtgtttgacttcgtagttgtgattctgtcaatt
gttggcatgttcctctctgagatgatcgagaaatattttgtatcgccaaccttattccga
gtcatccggcttgccagaattggtcgcattcttcgtctcatcaaaggagccaaaggcatt
cgtacactcctgtttgccttgatgatgtcacttcctgccttgttcaatattggcctcctc
ctgtttctggtcatgtttatttatgccatttttgcaatgtccaactttgcctatgtgaag
cgggaggcagggattgatgatttgtttaactttgagacatttgggaattcaatgctttgc
ctgttccagattaccacttctgcaggatgggacggcctcctggcacccatcctgaacaaa
caagatccggactgcgacagtgaaatggagcacccaggcagtttgtaccgcggcaactgc
ggaaacccctcggtcggcatcttcttcttcgtgagctacatcatcatctgcttcctgatt
gtggtgaacatgtacatcgccgtgatcttggagaacttcagcgtagccacagaggagagc
gctgaaccactgagcgaagacgactttgaaatgttctacgaagtctgggagcgattcgac
cccaacgccacacagtttgtggagtacagcaagctttctgaatttgcagacgctctagat
cctccgttacgcatcgccaagccaaacaagatccagctcatagccatggacctgcccatg
gtaagtggtgaccgcatccactgcctggacatccttttcgcctttaccctgagggtactg
ggagaggagggcgagatggatgccctgaggggacagatggaagatcgtttcatggcctcc
aatccctccaaagtctcgtacgagcccatcacgacaaccctccgcaggaaacaggaggag
atgtcatctgtgataatccagagggccttccgacggtaccgtttaaggcaaatgataaag
aaggcctctgaagcctaccgaaaacagctacaggatggggaggtacgtatcctggagaaa
gaggtgcttgtcatcggaaagtttcaagagaactctgcatcggacaaaactgatatgact
ctctcctctgcctctccgccatcttataacagtgtggccaagtcagagaaagacaaatat
gaaaaagagaggagagacaaggaggacaaagcaaaagatgcaagagacagaaaaaaatga
DBGET
integrated database retrieval system
