Carassius auratus (goldfish): 113050917
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Entry
113050917 CDS
T07313
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113050917
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113050917
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
113050917
NCBI-ProteinID:
XP_026070160
Ensembl:
ENSCARG00000005829
UniProt:
A0A6P6KDS2
LinkDB
All DBs
Position
31:complement(23413432..23414565)
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AA seq
238 aa
AA seq
DB search
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGDCDPLKSARLPGDALTDSL
SAEKTSVAAATRVFFSHQLSASPYPFLDLASKMSELPPAPFPHYSMLGYPAGVSAFPGMG
VLAGAPHAHPSPGNPGHMVPYNCMGWPGSGPVVPSSYVFLPGMTKAQHEPYLTYAATI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaaacgtcccatgaacgcttttatggtgtggtctaga
gcccagagacggaagatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggtgaatggaaactgctttcagactctgaaaaaagaccctttattgacgag
gccaaacgcctcagagccgtccacatgaaagaacacccggattacaaatacagaccgcga
cgaaagcccaaaaacttgatcaaaaaagacaggtatcattttaatgtgacgtacaatctg
ggtgactgtgacccgttgaaaagtgcgcgcttacccggtgacgcgctgacggactcgctg
agcgcggagaaaacgtccgtcgccgcagctactcgggtgtttttcagtcaccagctgtcc
gccagcccatacccttttctcgacctggcctccaaaatgtcggaattaccccctgcacct
ttcccacattactcaatgctcgggtatcccgctggagtctccgcgtttcccgggatgggg
gttctggccggtgcgccacacgctcacccgtctccgggtaacccgggccacatggtaccc
tataactgcatgggctggcctggttctggacctgttgttccttcatcttacgtgttttta
ccaggaatgaccaaagctcaacatgaaccttacctgacgtacgctgcgaccatatga
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