KEGG   Carassius auratus (goldfish): 113050948
Entry
113050948         CDS       T07313                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03010  Ribosome
caua04120  Ubiquitin mediated proteolysis
caua04137  Mitophagy - animal
caua04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    113050948
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113050948
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113050948
   04137 Mitophagy - animal
    113050948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:caua03011]
    113050948
   04121 Ubiquitin system [BR:caua04121]
    113050948
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113050948
Ribosome [BR:caua03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    113050948
  Archaea
    113050948
Ubiquitin system [BR:caua04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   113050948
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113050948
  Exosomal proteins of colorectal cancer cells
   113050948
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 113050948
NCBI-ProteinID: XP_026070223
Ensembl: ENSCARG00000013442
UniProt: A0A6P6KD25
LinkDB
Position
31:complement(23940224..23941998)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctcacagggaaaaccatcaccctcgaggttgagccctct
gatacaattgaaaatgtcaaggctaagattcaagacaaagaaggaatccctcctgatcag
cagaggctgatctttgctggtaaacagctggaggacggacgcaccctctctgactacaac
attcagaaggagtccacacttcatctagtgctgagactgcgtggtggtgctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagagaaagaaggtcaagctc
gctgtgctcaaatattacaaggttgatgagaacggcaagatccaccggctgcgccgtgag
tgtcctgcagatgagtgtggagccggggtgttcatggccagccactttgaccgtcattac
tgcgggaagtgctgcctgacttactgcttcaacaaaccagaggacaagtga

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