Carassius auratus (goldfish): 113051325
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Entry
113051325 CDS
T07313
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113051325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113051325
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113051325
REST complex
113051325
Heterochromatin formation proteins
Other heterochromatin formation proteins
113051325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
113051325
NCBI-ProteinID:
XP_026070740
Ensembl:
ENSCARG00000013639
UniProt:
A0A6P6KF82
LinkDB
All DBs
Position
32:complement(2427301..2451812)
Genome browser
AA seq
1261 aa
AA seq
DB search
MKRRLEDQDTVIGSQRRLPGGVDSFQHRVLNSASSLYETPPDNMQPSSSMQYSVSQTYQL
SMAQSSGGHGHTSSSAVHTGPHHHGPAVQPVGQGHAHATPAPAPTLGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNLPITQPAQLQTQTAAPTSTAALVIPSQ
PTPAKISKPMPSPALTPTSQPNPSIPSYASPRSPSVQSHTPISSSTAGSTPLQNNQPVEF
NHAINYVNKIKNRFHNQPEVYKSFLEILHTYQKEQRNAKEAGGSYTPTLTEQQVYAQVAQ
LFKNQEDLLSEFGQFLPDANNSLLLSKTTAEKAESVRIDHGVTVKRPQLNNKQRFNQNGC
QIRRHPGPPTTPPVKKKQKLLGRDHSVAEASKLGIGAESLFFEKVRKALRSSEAYDNFLR
CLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYREGAHIESFPKERATEGIAME
IDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQY
EEHIYRCEDERFELDVVLETNLATIRVLEAVQKRISRMSAEEQAKFRLDNTIGGSSEVIH
RKAIQRIYGDKAPDIIDGLKTNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEKYY
LKSLDHQGINFKQNDAKVFRSKMLLNEIETLYDERQEQASEDNAAPPSGPHMTLVYEDSQ
ILEDAAALIIHHVKRQSSIHKDDKYKIKQIIHHFIPDMLFARRGELSDVEEEEEEETEPD
EDGTKKHNGTTSTKSKLLFSHTAAAQQKLSNCDDAYNLFYVNNNWYIFQRLHQILCSRLL
RIYAQAEKQIEEDGREREWEKNVLGLKREKNDSPAIQLRLKEPMDIDVEDYYSAFLEMVR
NLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSE
CANKSTGGSLSTQASRGSVESAYQRKAEQLMSDENCFKLLFQKSKGAVQLAVELLDTEEE
NSDGPVDTERWPDYVERYLNTSSASPELREHLSQKPVFLPRNLRRIRKCQRGQEMHMREA
KETVKKSSEGGEDSKMECMFKLNSYKMVYVFKSEDYMYRRTAQLRAHQSHQRVSTRLHQR
FQAWLDRWRKEHVTSDMAAATYKWLMGEGREGLLPCRTVCEPKILHFQNVNRYKVTYSTT
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgcttggaggatcaggacacagtgatcggctctcagcggcggctccccggg
ggtgtagacagctttcagcaccgtgtcctcaactctgcctcctccctttacgagactcca
ccagacaacatgcagccatcatccagcatgcagtactcggtctcacagacctatcagttg
tcaatggcccagagttctgggggacatggacataccagcagttcagctgtgcacactgga
cctcatcaccatgggccagcggtccagccagtgggccagggtcacgctcatgctacgcca
gcccctgccccaacactgggtcagcagcagtttcaaaggctcaaggttgaagatgcgctt
tcctatttggatcaagttaagcttcagtttggcaatcagccacaggtctacaatgacttt
ctggatatcatgaaggagttcaagtctcaaagcattgatacaccaggtgtgatcagcaga
gtctcccagctcttcaagggccatccagacctcatcatgggcttcaacaccttcctgcct
cctggctacaagattgaggttcagaccaatgatctggttaatgtgaccactcctggccag
atccaccacatcacgccgcatgggatctctgttcagaaccttcccataacccagccagcg
caactccagacccaaacagcagctcccaccagcactgcagccttggtcatccctagccag
ccaacccctgccaagatcagcaagccaatgccgtctcctgcacttaccccaaccagtcag
cccaatccgtccattccctcatacgcctccccgcgctcgccctcggtccagtcccacact
cccatcagcagcagcactgccggttcaaccccgctgcagaacaaccagcctgtagagttc
aaccatgctatcaactacgtgaacaaaatcaagaaccgctttcataaccagccagaggtc
tacaaatccttcttggaaattctgcacacataccagaaggagcagcgtaatgctaaggag
gcagggggaagctacacacccactctcacggagcagcaggtctacgctcaggtggcccag
ctcttcaagaaccaagaggaccttctttcagaattcggccagttcctgccagatgctaac
aattcattgttattgagtaagactacagctgagaaggctgaatctgtgcgtattgatcac
ggggtgacagtaaagagaccccaactaaacaacaagcagaggtttaaccagaatggctgc
caaatccgcagacacccagggccgcccactacaccccctgttaagaaaaagcaaaagcta
ttgggaagagaccattcagtggccgaagccagcaaacttggaattggtgctgaatctctc
ttttttgaaaaggtgcggaaagcactgcggagttcagaggcttacgacaatttcttacgc
tgtttggtcatcttcaatcaagaagtgatctcacgggcggaacttgtgcagctggtcttg
ccatttttggggaaattcccagagctttttacatggtttaagaacttcctcggctacaga
gagggtgcccatattgagagctttcccaaagagcgagccactgaaggcattgcaatggaa
attgattatgcgtcctgcaaaagattgggctccagttacagagccctgcccaagagcttc
cagcagcctcgatgtacaggcaggactccactgtgcaaagaggtgttgaatgatacgtgg
gtgtcatttccatcctggtctgaggactcaaccttcgtcagctccaaaaagacccagtat
gaagagcatatatatagatgtgaagatgagcgctttgagcttgatgtggttctggagaca
aacctggccactatccgtgttctggaggctgttcagaagaggatctcgcgcatgtctgct
gaggaacaggccaagttccggctggacaacaccatcggaggctcctctgaggtcatccat
cgtaaagctattcagaggatatatggtgataaagctccagacatcatagatgggcttaag
acgaaccctgctgtctctgtacctattgtactcaaaaggctgaaaactaaagaagaagag
tggcgagaggctcagcgtggcttcaataagatctggagggaacagaatgagaagtattac
ctgaagtctttagatcaccaaggtattaacttcaaacagaacgacgcaaaggtgttccgc
tccaagatgctgctcaatgaaatcgagactctttatgatgagcgtcaggagcaggcttca
gaagacaatgccgcccctccttcaggccctcacatgaccctggtgtacgaggacagccag
atcctggaagatgcggccgctctcatcatccaccatgtcaagagacagtccagcatccac
aaagatgacaagtacaaaatcaagcagatcatacaccatttcatccccgacatgctgttc
gcccggcgcggcgagctttctgatgtggaggaggaggaagaagaggagactgaaccagat
gaagatgggactaaaaagcacaacgggacgacgtcaacaaagtctaagctcctcttcagc
cacacagcagccgcccagcagaagctgagtaactgtgatgatgcctacaacctcttctat
gtcaacaataactggtacatcttccaacggctgcatcagatcctgtgctcccgactgcta
cggatctacgcacaggcggagaaacagatagaggaggatggcagagagagggagtgggaa
aagaacgtcttgggactgaaaagagagaagaatgacagcccggccatccagctgcgtttg
aaagaacccatggacatcgatgttgaagactactactctgccttcttagagatggtgcga
aaccttctggatggcaacatggagacatcacaatatgaagaccagctgagggaaatgttc
accatccatgcctacattgccttcacaatggacaaactcatccagagtatagtgagacag
ctgcagcatatagtaagcgatgagatctgtgtacaggtgaccgatctttaccttagcgag
tgtgccaacaaatccaccggtgggtccctctccacccaagcttctagaggaagtgtcgag
tcagcctaccagcgcaaagccgagcagctgatgtccgatgagaactgttttaagttattg
ttccagaagtctaagggggctgtgcagctggccgtggagctgttggacacggaggaggag
aactcggatggacctgtggataccgagcgctggcccgactatgtggagcgatatctgaac
accagctcggcctctccagagctgcgagagcacctctcccagaagcctgtgtttctaccc
aggaacctaaggcgaatcaggaagtgccagagaggtcaggagatgcacatgagagaggcc
aaagaaacggtcaagaaatcctcagagggcggcgaggactcaaaaatggagtgcatgttt
aagctcaattcttacaagatggtgtatgtcttcaagtcggaggactacatgtaccgacgc
actgcacagctgagagcacatcagtctcaccagcgagtaagcactcgtctgcatcagcgc
tttcaggcgtggctagaccggtggaggaaagagcacgtgaccagcgacatggcggccgcc
acttacaagtggctgatgggagagggccgggaggggctactgccctgcagaaccgtctgt
gaacccaagatcctccacttccagaacgtcaacagatataaagtcacctacagcactacg
tcgtaa
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integrated database retrieval system
