Carassius auratus (goldfish): 113051333
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Entry
113051333 CDS
T07313
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113051333
Membrane trafficking [BR:
caua04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113051333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_RPS2
V-set
Motif
Other DBs
NCBI-GeneID:
113051333
NCBI-ProteinID:
XP_026070760
Ensembl:
ENSCARG00000013700
LinkDB
All DBs
Position
32:2477752..2492741
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPIDTRLLDLSKNRLKAINPEEFLSYQHLEELQLNENIISAIEPGAFSNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDLVFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKFLEIANWPLLETLTTKSLHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIQDQKAIHRFVDEGTTVQFPCKADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHIHSYSPNWPHQPNKTFAFISNQPND
SGANGTGATNPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNVKPNIEIEYV
PRKVDGESSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggatct
gccactggctgcccctctcgctgtgagtgcagtgcccaagagcgctcggtcgtgtgccat
cggcggaagctgatcgccctccctgagggaattcccattgacacgcggctgttagatctc
agcaaaaaccgcttgaaagccatcaacccggaggaattcctcagctatcaacacttggag
gagctacagctgaatgagaacatcatttctgccattgaaccaggggccttcagcaacctc
cttggcttgcgaatattgggactacgcaacaacaagctgaagctgatacagcttggtgtt
ttcactggcctcagtaacctcactcgattagatattagtgagaataaaatagtaattttg
ttggaccttgtgtttcaagatctctacaacctaaaagaactggaggttggagacaacgac
ctggtgttcatctctcacagagcttttcatggccttagcagcctagagcagctcactatg
gaaagatgcaacctgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
accctcagactgcgacatctcaacatcaacatcattcgagacttttccttcaggaggcta
tatcgactcaaattcttagagatagcaaactggcctctattagaaaccttgaccaccaag
tccctccatggacttaacatcacaaccttgagcataacaaactgcaatctcactgccgtc
ccttatgaggccattcagcaccttgtgtaccttcgatttttcaacctgtccttcaatcca
attgaggttgtggaaggcaacaaaatgcacaatttgttgaggctccaggcatttcatttg
gttgggggcaggctagtcagcattgagccttattcgttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggagtctgccttccattcagtt
ggcaacctggagacactggctcttcacgacaaccccctggcatgtgactgtcgtctcctc
tgggtctttcgccgccgatggagacttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctccctccgaattat
ttcacctgtcagaaatccaagatccaggatcaaaaagccattcatagatttgtggatgag
gggaccactgtccaatttccttgcaaagcagatggagaccccgctcccatgattatgtgg
cagtctccaaaaaagcaatttatcactactaaaagcattggccggctgtctgtgtctccg
gacggcaccctagaggttagatatgcccaaatacaagacaatggcacatacacctgcatt
gctgtcaatgcaggaggtaacgacacccgtttggctcacctacacattcatagctactct
cccaattggccccatcagcccaataagacctttgccttcatctcaaaccagcccaatgat
agcggtgccaatggaactggtgcgacgaatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctgggagtggtactgttctgtctggtgctc
ttgttcctctggagccgagggaaaggcaatgtcaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaagcagcccgactgagggatctcacaagatcagtatgaaa
atgatttaa
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