Carassius auratus (goldfish): 113051419
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Entry
113051419 CDS
T07313
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113051419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113051419
03016 Transfer RNA biogenesis [BR:
caua03016
]
113051419
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113051419
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113051419
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113051419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
GH3
Motif
Other DBs
NCBI-GeneID:
113051419
NCBI-ProteinID:
XP_026070951
Ensembl:
ENSCARG00000015020
UniProt:
A0A6P6KH40
LinkDB
All DBs
Position
32:complement(5862959..5877856)
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AA seq
642 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMHIWETTQTLGNLYFNNHCNTASAKLTSSSNAADSSGKPK
DHRGMSRSKPDSEVSDQQDFIPLEANSTSRGVRGGGQVVASRFAVVGTELPSKRKRDNKA
STFGFNRNLLLTDGVEDIYTGMPWKSRNYTEGIVGLHEEIKDFYKYISPRPEEDHMRQEV
VERIQRVIKDLWPNAEVQVFGSFSTGLYLPTSDIDLVVFGHWETLPLWTLEEALRKRKIA
DENSVKVLDKATVPIIKLTDLHTEVKVDISFNVQNGVKAANLIKEFKQQFPVLPYLVLVL
KQFLLQRELNEVFTGGIGSYSLFLMVVSFLQLHYREDACSSNPNLGVLLIEFFELYGRHF
NYLKTGIRIRDGGSYVAKDEVQKGMLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKEAF
DYAYVVLNHAVSPIAKYYPNNKSESILGRIIRVTQEVAEYRDWISAQWGQRSNNEPVLNC
NENDVTLLVESEELDECNNNNNVSEDSAVLPTVPRSKVSSNSSSPSLSLPSSPSSSSPSS
TASSSSDADSDGTPYKTLKALGGRGSNSYSENTVRNLSNHRSQNHSATMPTPTYKGNKSR
QLAKSAQGQHNNPNKIQQNKSQKTTMKKRKPQREVAREDLCR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagaatcgcctggtttcagccagaacagcgcggacctgccaacaacctgtgg
atgcacatctgggaaacgacgcagacgttgggaaacctctacttcaacaaccactgcaac
acagccagcgccaaactgacgagcagcagcaacgcggccgacagcagcggcaagcccaag
gatcatcgggggatgtctagatccaaacccgacagtgaggtctccgatcaacaagatttt
atccctctggaagccaatagcacaagcaggggtgtccgcggaggggggcaagtggttgcc
agtaggtttgcggtcgtgggaactgagttgccaagcaagaggaaaagagacaacaaggcg
agcacctttggttttaacagaaatctgctgctgacagatggagtggaggacatttacacg
ggcatgccgtggaagagcagaaactacacggaaggcattgtggggctgcatgaggagata
aaggacttttataagtatatttctcctcgtccagaggaggaccacatgaggcaagaggtg
gttgagaggatccagagagtcatcaaggacttgtggcccaatgctgaggttcaagtgttt
ggcagcttcagcacaggcttgtatttacctacaagtgatatagacttggtggtttttggt
cactgggagactttacctctctggactctggaagaggcgctacgcaagagaaaaattgca
gatgagaactcggtcaaagtcctggacaaagcaacggttcccatcattaaactgacagac
ctgcacacagaggtaaaagtggacatcagctttaatgtacagaacggtgttaaagctgca
aacctcatcaaggagttcaaacagcaatttcctgtattaccgtacctggtgctggttttg
aagcagtttttgctgcaaagagagctgaatgaggtttttacgggaggcatcggatcatac
agtctcttcctcatggttgtcagcttcttacagctgcactacagagaggatgcatgtagt
tcaaacccaaacctgggtgtcctgctgattgagttttttgagctgtacggacgccatttt
aactacctaaagacagggatcaggataagagatggtggctcttacgtggccaaggatgaa
gtgcagaaaggcatgctggatgggtacagaccctctatgctttacattgaggatcctttg
cagccaggaaatgatgttgggcgaagttcgtatggggcgatgcaggtgaaagaggctttt
gattacgcttacgttgtcttaaatcatgctgtgtccccgattgccaagtactaccccaac
aacaagtcagagagtattctaggtcgaataatccgtgtcacacaggaagtagcggagtac
cgtgactggatcagtgctcagtggggccagcggagcaacaatgagccggtcctcaactgt
aatgaaaatgatgtgacgctgctcgtggagtctgaggagcttgatgagtgtaataataat
aataacgtttcagaagatagtgcggtgcttcctactgttccccggagcaaagtgtcctca
aactcctcctctccttccctctctctcccttcatcaccatcatcatcatcgccttcttca
acagcctctagctcgagtgatgcggactctgacggaacaccctataaaactttgaaagct
ttgggtggccggggctctaactcttacagtgagaatacagtaaggaatctgtccaatcac
agatcacaaaatcattcagcaacaatgcccacccccacttataagggcaataagagtcgg
cagcttgctaaaagtgctcaagggcaacacaacaaccccaacaagatccagcaaaacaag
tcccaaaaaaccacaatgaagaagaggaaacctcagcgtgaggtagcgcgtgaggacctg
tgtagatag
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