Carassius auratus (goldfish): 113051487
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Entry
113051487 CDS
T07313
Symbol
ddx28
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113051487 (ddx28)
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113051487 (ddx28)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Other ribosome biogenesis factors
113051487 (ddx28)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
113051487
NCBI-ProteinID:
XP_026071047
Ensembl:
ENSCARG00000052794
UniProt:
A0A6P6KIW4
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All DBs
Position
32:complement(7305583..7308311)
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AA seq
564 aa
AA seq
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MQSVKIGRCALLTSKISQVTLMRSSCSSQFGWGQIACTGAGVRRMTSASSQPVVIRIPRR
MQEHIENIKQMQSKKFDKLPTVKPGRLLIKSKNPQLNQSVGYTLGKFEQPDLTSKAWKSN
KALGDYFSINSIQSAPPSVLKQKDVGDHSASTPQKTFKCFNICPELVETLHSQNIIHPTT
VQMQTIPKILKGRNILCAAETGSGKTLAYLLPIIHRLQEEPFTDTERNIRAVVIVPSREL
AEQVTSVARSVSKPFGLVVKVAGGGRGVGNIKVAFTHGQPDVLVATPGALLKALWKRFIN
LNQLNFLVIDEADTMFDESFAGMLENILSHTEVASRLSETVGLIRKAQLVVVGATFPGGV
GEVLSKVTDLASMVTVKSRMLHHLMPHVKQTFLRVKGADKILELHQALKKAEMEHKGVLV
FCNSASTVNWLGYSLDEMGVRHMRLQGEMPATMREGIFRNFQRGNVDVLICTDIASRGLD
TQRVGLIVNYDFPETHTDYIHRAGRVGRAGGSEGGEVLSFVTHRWDVELVQRIEKAARRR
TSLPGMESEIQKPSNKTEREMREK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcagtgaagatcggacgctgtgcccttctcacttccaaaatctcgcaggtaacg
ttaatgcgcagttcttgtagttcacagttcggctggggacagatcgcgtgcactggcgcg
ggtgtacgcagaatgacaagcgctagctcacagcctgtggtgatccgcatcccgagacgc
atgcaagaacatatagagaacatcaaacagatgcaaagcaagaagtttgacaagctgcca
acagtcaagcctggaagactgttgatcaagagcaagaaccctcagctaaaccagtctgtc
ggctatacacttgggaaatttgaacaacctgatctgacatccaaggcatggaagagtaac
aaagcgttgggggattacttctccataaacagcatccaaagtgctcctccatctgtcctc
aagcagaaggacgtgggtgatcacagtgcttccaccccacagaagacatttaaatgcttt
aatatttgtccagaactggtcgagactttacacagtcagaatataattcaccccaccaca
gtgcagatgcaaaccattcccaaaatactcaaaggacgcaatattctgtgtgctgcagag
acaggaagcggaaagacactcgcttacctccttcccatcatccacaggctgcaggaggag
cccttcactgacaccgagagaaacattcgtgctgtggtcatcgtgccttcacgggaacta
gcagaacaagtgacatctgtcgctcgatcggtcagcaaaccatttggacttgtggtcaaa
gtcgcaggaggtgggagaggtgtgggaaacatcaaagtggcgttcactcacggtcagccg
gatgttttagtggccactcctggcgccctgctgaaggccctctggaagcgcttcattaac
ttgaaccaactaaacttcctagtcatcgatgaagccgacactatgtttgacgaaagcttt
gcaggcatgcttgagaatattctttcacataccgaggtggcctccaggctttctgagacg
gttgggctcatccgtaaagctcagctggtcgtggtgggagccacatttccgggtggcgtt
ggagaggtgctcagtaaggtgactgacctggccagcatggtgactgttaaaagccggatg
ctacatcatctcatgccgcatgtaaagcagacgtttctcagggtcaaaggtgcagacaag
attctagagcttcaccaggccctgaagaaggccgaaatggagcacaaaggcgttttggtg
ttctgtaactctgcttccactgtgaactggctgggttactcactggacgaaatgggtgtt
cgtcatatgaggctccagggagagatgcctgcgactatgagagaagggattttcaggaac
tttcaaagagggaatgttgatgttctgatatgcactgacatcgcttcgagaggtttggac
acacagagagttggacttatcgtcaattatgacttccctgagacccacactgattacatc
caccgcgcagggcgcgtggggcgagccggtggctccgagggaggggaggtgctgagcttc
gtcacacaccggtgggatgtggaactggtgcagagaatagagaaagcagccaggaggaga
acatctttaccagggatggaatcagagattcagaaacccagcaataaaacagaaagagag
atgagagaaaagtga
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