Carassius auratus (goldfish): 113051599
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Entry
113051599 CDS
T07313
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113051599
Membrane trafficking [BR:
caua04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113051599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
TPR_7
TPR_NPHP3
TPR_10
SH3_1
SH3_9
TPR_19
ARM_TT21_4th
TPR_11
SH3_2
Motif
Other DBs
NCBI-GeneID:
113051599
NCBI-ProteinID:
XP_026071278
Ensembl:
ENSCARG00000006416
UniProt:
A0A6P6KG54
LinkDB
All DBs
Position
32:complement(10925150..10943272)
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AA seq
1323 aa
AA seq
DB search
MSAAARRNSSKTGNGVKSESDPDKTRTVRRELSNECTHSEWDNIMESSSRDYKISRGSIK
GTPGAPDDNIPTVLAIQLAMVEGPDRLPADEDTQEVLCRKLCLLEADLSGVMTLISELSA
HFVSINSEERTIFITFKTLEEIWKFSTYHKMGFLGQCMENLLMDQEFWLISLDQHSGIEI
SIKEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWT
VLSLADGDRGTKPKPALEPVIPFHEWFLKSCPESILVGGGKDTGGLPFQIAVGVCEATEE
YDADGPDELSFQAGERIIILGLLVACCEWFLGKLEKTGDTGLVKTKLVKTTTSSCESSGI
FLNDEDRQIVTLDQDKIKEETIALLKKICQSNVGTNYKLDLAKEIPRSDENKTHQTELNN
LKQKVKHILSEGDKSQRNDVSSVTIKQQMKKQADNTEMSRETPRFSFCSELDSTSPDGHH
ALLSFLSSRDYQPEFLLLYSAYPEFLISLFDGQSDEEEIVVYLGIARELARKKHVSWAQS
RICFLLGQLCAGRSKFSQARVYYEEALNVPKDCFTDMFLLSAIYSNLALIYLTQKNHERF
FTFSERFSALLMAVPECLFGCEDPEVLKYVLKKAVLAKNQLAEARACFLQAKLHLKIKDG
MSAIPFIERLLILADEVPVACDDTMSHVFLVLARLYSDQRLPRLAESCAKKASLQVGATM
SYCLCSISLLLENASELYGVAIPTQIAPYLTRAAALVPPSKEPVLGHVQALCLSWLFHRH
GMPDRAVHYMSTVLDHSGISSIGHADSTAALLWLAWLYICNKQPGTALEVLDTVLSSLPE
HCTTQLEGVVYNMRAISYRHSGDIRQASESYRAAIEICEEFEDRRNWAIALANFGFMCLQ
IKAKRLAEEYLTQSVELFSELEDEGHELSFISVLLELGKHFVSQGNHEHGKTYYEWALLI
AMFINHMDSQLQATCHLCQLYEEVCPDEAQCIIYNEHQLNLLQRIGDKSLEGEILDKISQ
LYLNLATEKANRAALDYTKQSLGIFIDLGRKRKEAHAWLKAGKIYHILQQTELVDLYVQV
AQDMALSTGDTLFTLEMLEAAGDVFFNSSHDREKAICFYRDRALPIALKTSSVRSQLRLC
NKLSELLLQLGQCSEAIEYAQTALDISTSLADHLNERVAFHRLATLYHCLGQFEMAEHHF
LKALSLCPSPLQYDEEGLYYVRVYKTLGDIIFYDVKDPFDAAGYYHLALAAAMDLGNKRS
QLELCTRLATIYHNFLMDRELSLFFYQRARAFANDLHIRRINLAPDYSFRTTAQYKSTIT
GAR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctgctcgtagaaactcgtccaaaaccgggaacggcgtgaagtccgagtcc
gacccggataaaactcggacggtacgcagagagctgtcgaatgagtgcacacacagtgaa
tgggataatattatggagtcttcgtctagagattataagatatcaagagggagcatcaaa
ggtacccctggagctcctgatgataatataccaacagtgttggctattcagttggctatg
gtggaggggccagatcgacttcctgccgatgaggacacacaggaagtgctttgcaggaaa
ctttgtttgctggaagctgacctttcaggggtcatgaccttaatctctgaactgtctgct
cattttgtatccatcaacagtgaggaaaggactatatttatcacttttaaaacccttgaa
gaaatatggaagttcagcacataccacaagatgggcttcttggggcagtgtatggaaaac
cttctcatggaccaggagttctggttaatctccctcgatcagcattcaggaattgagatc
tcaattaaagaagagacgctaaatctgatgtataaaggctttctaatgcaagaagggtct
ttctttggatgctgcacagcaaatcagatgtttgatagctctacgtcaggtagcgacctt
tatctggagaagggggacatcgctttgtttgagcctccattcttaggatcagggtggaca
gtgctgtcacttgcggatggggatagaggaaccaaaccaaaaccagctctggagcccgtc
attccctttcatgagtggtttctaaagtcctgcccagaaagtatattagtgggtggtgga
aaggacaccggtggccttcccttccagattgcagtaggggtctgtgaggccacagaggag
tatgatgccgatggaccagatgaactgagtttccaggctggtgaacgcatcatcatcctg
ggcctgctggtggcctgttgtgaatggtttttgggaaaactggagaaaactggggatact
ggacttgtcaaaaccaagctggtcaaaacaaccacttcatcttgtgaatcatctggcata
ttcttgaatgacgaggacagacaaattgttaccttggatcaggacaaaattaaagaggag
actattgctttattgaagaaaatatgccagtctaatgttggcacaaactacaaacttgat
ctggcaaaagaaattccaagatcagatgaaaacaagactcatcagacagaattaaacaat
ctaaaacagaaagtcaaacacattctgagtgagggagataagtctcaaagaaatgatgtt
tcttcagtcaccatcaagcaacagatgaagaaacaagctgataatacagagatgtcccgg
gaaaccccacgtttttctttctgctcagaactggacagcaccagtccagatggacatcat
gctctcctttcgttcttgagcagtcgtgactaccagccagagttcctgctcttgtacagt
gcttacccagaattcctcatctcactttttgatggccaatccgatgaggaggagatagtg
gtgtatttaggcatagcccgagagctggcacgaaagaagcatgtctcgtgggcgcagagc
agaatctgttttcttcttggacagctttgcgcagggaggtcgaagttttctcaagctcgg
gtttattacgaggaagccttgaatgtacccaaggattgcttcacagacatgtttctgctc
tctgccatttactccaacctagcactcatctacctaacacagaagaaccatgaaagattt
ttcacgttttcagagcgcttttctgctttgttgatggctgtccctgaatgtttgtttggc
tgtgaggaccctgaagtattaaaatatgtacttaaaaaggctgtactggccaagaatcag
ctcgccgaggcccgagcctgcttcctccaggccaagctccacctgaagattaaagatggc
atgagtgcaatcccgtttattgaaaggcttttgatccttgccgatgaggttcctgtggca
tgtgatgacacaatgagccatgttttcctggtgttagcaagactctacagtgaccagaga
ctgccacgcttggctgaaagctgtgcaaagaaagcgtcacttcaggtaggagccaccatg
tcatactgtctttgtagtatctcactattgttggaaaatgcatcagaactgtatggagtg
gccatcccaacacaaattgctccatacctgacccgtgccgctgctttagtgccccccagc
aaggagccagtgctgggtcatgtccaagctctgtgtttgtcctggctcttccatagacac
ggtatgcctgacagagctgttcactacatgtccactgtcctcgaccacagcggtatatcc
agtattggccatgcagacagtactgctgctctcctgtggttggcgtggctgtacatctgc
aacaagcaacctggcacagctctggaagtgctagacactgtgctgtcatcgctccctgag
cactgtactactcaactggaaggagtggtttacaacatgcgagccatttcatacagacat
tcaggagacatccgacaggcctctgaaagctaccgggctgcaattgagatctgcgaggag
tttgaggatagacggaactgggctatagcactggccaactttggattcatgtgtttgcaa
atcaaggctaaaagattggcagaggaatacctcactcagtcagtggagctgttctccgag
cttgaggatgaagggcatgaactcagttttatttcagtgcttcttgagttggggaaacac
tttgtttcccagggaaaccatgagcatgggaagacctactatgaatgggccctgctgatc
gccatgtttataaatcacatggatagccagttgcaagccacatgtcacctgtgtcagctt
tacgaagaggtgtgtccagatgaagcccagtgtatcatctacaacgagcaccagctgaac
cttcttcagcggataggagacaagagcttagagggagagatactggacaagatcagtcag
ctgtacctgaacctggctaccgagaaagccaacagagccgctttagattacaccaaacag
agcctgggcatcttcatcgacttgggcagaaaacgcaaggaggctcatgcctggctaaag
gcagggaagatttaccacatcctccaacagacggagctagtggacctctacgtgcaggta
gcccaggacatggctttgagcacaggagacacactcttcaccctggagatgttggaagca
gctggagatgtgttcttcaacagctcacatgacagggagaaagccatctgcttttacagg
gaccgagcccttcccatcgcactaaagacgagcagtgtgcgctctcagcttaggctgtgt
aacaagctttcagagcttctgctgcagctgggacagtgctcagaggccattgagtatgct
caaactgcattagacattagcacgagtctagctgaccatttaaatgagcgagtggcattc
catagactcgctacgttgtaccattgtctgggtcagtttgaaatggcagagcaccacttt
ctgaaagccctgtccctgtgcccctcacccctgcagtacgacgaggaaggcctgtactat
gtcagggtttacaaaacacttggagacatcatcttctatgatgtaaaggacccatttgat
gctgctggctattatcacctggccttggctgctgctatggatctgggcaacaagaggtct
cagctagagctgtgtactcggttggccaccatctaccacaactttctcatggaccgtgaa
ctctcgctgttcttctaccagcgagccagagctttcgctaatgatctccatatccgtcgt
atcaacctggcaccagactacagcttcaggaccacagcccagtacaaaagcacaataact
ggggcaagataa
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integrated database retrieval system
