Carassius auratus (goldfish): 113051626
Help
Entry
113051626 CDS
T07313
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113051626
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113051626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
DUF6786
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
113051626
NCBI-ProteinID:
XP_026071309
Ensembl:
ENSCARG00000006575
UniProt:
A0A6P6KG41
LinkDB
All DBs
Position
32:13846582..14027173
Genome browser
AA seq
1161 aa
AA seq
DB search
MKALIMAVLAHLYLAVVFACAWMSLFGPISCHTGVINQRDVLDRGLDIRGGHANGRDEAI
ISAHSRGDYNGDPGGPVMGVPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGENSS
VILILTKYYHADSNKVLESSLWRSSDYGSTYTKLNLMSGTTIIVTNFYICPTNKKKVILV
SSSINERDQMLFISTDEGSSFQRQPVSFTVDTLLFHPSEEDKLLAYSKEAKLYISTDLGH
KWTLLQERVTKDRVFWAVTRVDVDPDLVHMEIQDISGGYLYVTCLIQNCSDKMVTAQFLG
KIDHNSLSVQDEHIFVKVSTGNRTKYYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVF
LALQEWYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQK
VDGKVMTLITYNKGRDWEPLAPPTTDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVHTK
DSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTS
IPLKILKFSIDEGQTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVD
FRKSFPTQCTEADYDSWKLTDLQGEKCIMGQERVYRRRKESSFCIKGKSYTSALTAKPCQ
CTEKDFACDYGFERAPSLRLEGDRCYPDFWHDPDAPPENCHLGHSYKSSTGYRKVIANVC
EGGLNKEQSAKQHSCPLLAPKGLQLAIKGQMLAVAPGDDITFIVHQEQGDTTSTRYQVDL
MDGVRAIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQATLYIQVTAPLQDVHLEV
VPIAGRHQEVNLTAIVLPTEANLTVFYWWIGDNLQPKLTLENSLIARFSEEGEVPVTVQA
SNGRSMVQDSKTVIVYDQFQVIPLSFSRNLDRFNPNIPEWRQDVGQVVSKIIAKLTGVPQ
DSLVTMVKPGLPTTADLYVLPQESTPVKRSVFVDKRVPTIKQILSENNVSFIVRGGLRVL
VTLADSDRGSRLAAAGPGVWALAVFLLVSLISAAAFILFKFKRKNYKNHGSLLRPEESSL
TRPWLRFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNAG
SNHSGVVLSINSRELHSYLTS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctcatcatggcagttttggcgcacctgtacctagctgtggttttcgcttgc
gcgtggatgtcactgttcggaccgatttcatgtcacaccggcgttataaaccagagagac
gtactggaccgagggcttgacatccgcggtgggcatgccaatggcagagatgaagcgatt
atctcagcgcacagccgcggagattacaacggggaccccggcggaccggtcatgggagtt
ccccgagtccggagggcatcgactccggagaaagtctctctactcagcagctctttcgtc
cttaaaggggatgccacccacaaccaggcaatggtccactggacgggtgaaaatagcagc
gtcatcctcattctcactaaatattaccatgcagactccaacaaagttcttgagagttcc
ctttggagatcaagtgattatgggtcaacctacaccaagctcaacctgatgtctgggaca
accatcatagtcacaaacttctacatctgtcccaccaataagaaaaaggtgatcttggtg
agctccagcatcaatgagcgggaccagatgctcttcatcagcacagatgagggttcatcc
ttccaacggcagcctgtctccttcactgtagataccctcctcttccatccatctgaggaa
gacaaacttctggcttacagcaaggaggcgaagctgtatatctccaccgatctgggtcac
aaatggactctgctacaggagcgtgttactaaagacagagttttctgggccgtgaccagg
gtggatgtggatcctgatctggttcatatggagattcaagacatcagtggtggatacctt
tatgttacatgtctcatacaaaattgctctgataaaatggtgacagcacagttcttgggg
aagattgaccacaattccctctcagtgcaagatgaacacatatttgtgaaggtatctaca
ggaaatcgaaccaagtattatgtctcataccgaagaaatgaatttgttcagatgagattc
cctaaatatgccctaccaaaggatgtgcaaattgtgagtacagacgagaatcaggtattc
ctggctctgcaagaatggtatcagacagacacgtacaacctctaccagtcggatccacaa
ggagtctattactccattgtgttggagaacgtccgcagcaccaagcagcctgaagagaat
gtcctcatcgacatcctagaggttcgtggcatcaagggcgtattcttagccaatcaaaag
gtagatggaaaagtaatgactctcatcacctacaacaaaggcagagactgggaaccactg
gctcctcccacaactgatatgaatggcaaacctgtcagttgcaagcagcctgactgtcac
ctccatctccacttgcggtgggctgacaacccgtatgtatctggaacggtccacactaaa
gattctgccccaggcctcataatgggtgcaggtaaccttgggtctcagctggttgaatat
aaagaggagatgtacatcacctcagactgtggcaagacctggagacaggtttttgaagaa
gagcatcacattctttatctggatcatggcggggtcattgtggccattaaggacacctca
atccctttaaaaatactcaaattcagcatagatgaaggacaaacatggagcatccacaac
ttcaccagcacttctgtgtttgtggatggacttctgagcgaacctggagatgagacactg
gttatgacggtatttggccacataagttaccgttcagattgggagctggtgaaggtggat
ttccgaaagtcatttcccacacagtgcacagaagctgattatgactcctggaaactcact
gaccttcagggagagaaatgcatcatgggccaggaacgagtgtacaggaggaggaaagag
tcatcgttctgcattaaagggaagagctatacatcagctttaacagctaaaccttgccag
tgcacagagaaagactttgcctgtgactatggctttgagcgtgctcccagcctcaggtta
gagggggatcgctgttatcctgatttctggcatgatcctgacgctccacctgaaaactgc
catttaggacacagctacaagtccagcacaggttaccggaaggtcatcgctaatgtttgt
gagggtggcttgaataaagaacagagcgcaaagcagcattcttgccctttgctggcccct
aaaggccttcagctggccatcaaaggacagatgctggccgtggcacctggtgatgacatc
accttcatagtccatcaggaacagggtgacaccaccagcaccagatatcaggtcgatcta
atggacggtgtcagggctatatacgaaaacctgacagtcacagatgaacccattcagcac
cgttatgagaagccaggtgtttaccgtgtcaatgtgaaggctgaaaactctgctggacat
gaccaagccacactttacatccaggtcacagctcctcttcaagatgtccatctggaggtg
gtcccaatcgctggcagacatcaagaagtaaatctcacagctatagtgctgcccactgag
gcaaaccttacagtgttttactggtggattggagataaccttcagccaaagctgactctg
gagaatagtctgattgcaaggttctctgaggagggggaagttcctgtgacggttcaggct
tctaatggtcgatccatggtacaggacagcaagactgtcattgtctatgatcaattccag
gtcatcccattgagtttcagtcgtaatttggatcgctttaacccaaacatccctgaatgg
agacaagatgtgggacaagtcgtatccaagattatcgctaagctcaccggggttcctcag
gattctttggttaccatggtgaagcccggtcttcccaccactgcagacctgtatgttctt
cctcaagagagcacaccagtgaagagaagtgtgtttgtggataagcgtgttcccaccata
aagcagattctgagtgagaacaacgtgagcttcattgtgagaggagggttaagagtattg
gtgactctggcagactcagatagaggctctcgtctggctgcagcaggtccaggtgtttgg
gctctagctgtctttctcctcgtcagtctgatctctgccgcagcattcatactcttcaaa
tttaaaaggaaaaactacaaaaaccatggttccttgctgaggccagaggagagcagccta
acgcgtccctggctgcgtttcagaaaactgccaggacgaaacgtttatgcccagatgcac
aatgagaaggagcaggaaatgaccagccctgtcaatcacagtgaggacacacagaatatc
attcaaggcgaggagttcatcgatgacgaccttgactcacagacactaggtaacgccgga
agcaaccactcaggagtggtgttgagcataaattcaagggagctgcacagttacctgacc
agctga
DBGET
integrated database retrieval system
