Carassius auratus (goldfish): 113051706
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Entry
113051706 CDS
T07313
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113051706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113051706
03009 Ribosome biogenesis [BR:
caua03009
]
113051706
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113051706
Spliceosome [BR:
caua03041
]
Complex A
U2 snRNP components
U2 related factors
113051706
Complex B
113051706
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
113051706
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
Helicases
113051706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Glyco_hydro_98M
SRP54
Atrophin-1
AAA_25
Flavi_DEAD
AAA_29
DUF3915
AAA_7
Motif
Other DBs
NCBI-GeneID:
113051706
NCBI-ProteinID:
XP_026071459
Ensembl:
ENSCARG00000021356
UniProt:
A0A6P6KGK0
LinkDB
All DBs
Position
32:complement(17147437..17182641)
Genome browser
AA seq
761 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRDRDRDRDRDSKASSVPL
ISGVSMGGILPLKQTAMQQQINPFTNLPHTPRFYEILKKRLQLPVWEYKERFNDILNRHQ
SFVLVGETGSGKTTQIPQWCVDMVKALPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLG
QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMG
VLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEA
AIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPP
QQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE
SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL
KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKM
VIASCDFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAF
KQNHEAVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALV
TGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIK
PEWLVKIAPGYYEMSNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggcatcggttggacctaggcgatgattattcgtcgagcaagaagaggtcg
tctgacggtaaggaccgagaccgagatcgggacgagaggtcgaaggatcgtgaccgtgac
agagaccgtgaccgtgatcgagaccgggatcgagacagcaaggcgtccagtgtgccgctc
atctccggcgtgtccatgggtgggatactccctctgaagcagacggccatgcagcagcag
atcaaccccttcaccaacctgcctcacacgccgcgcttctacgagatcctcaagaagagg
ctgcagctgcccgtctgggagtacaaggaacgctttaacgacatcctcaaccgccatcag
agcttcgtgctcgttggagagaccggctctggaaagaccacacagatccctcagtggtgt
gtggacatggtgaaggccctcccggggcccaagcgcggcgtggcttgtacacagcctcgt
agagtggcagccatgagcgtggctcagagagtggctgatgaaatggacgtcatgctgggg
caggaggtcggatactccatcagatttgaggactgtagctctgccaagaccatactgaaa
tatatgacagacggtatgttgctccgcgaggctatgaacgacccgctgctggagcgatac
ggtgtcattattctggatgaggctcacgagcgcaccttagccacagatatactgatgggc
gtcctcaaagaagtggttcggcagagatccgaccttaaggtcatcgttatgagcgctact
ctggacgctgggaagttccaggtttatttcgacagctgccccttgctcaccattcctggc
cggacgcatcccgtggagatcttctacacgcccgagccggagagggactacctggaagcg
gccattcgcacggtcatccagatccacatgtgtgaggaagatgagggagatgtgctgctc
ttcctcaccggacaggaggaaatcgacgaagcttgcaaacggatcaaacgtgagattgac
gatctcggccctgatgttggcgacatcaaaatcatcccgctctactccacgcttccacca
cagcaacagcagaggatcttcgagccgcctccaccccgcaaacccagcggagccatcggc
cggaaggttgtggtttctacaaacatcgctgagacgtctctgaccatcgatggtgtggtg
tttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcattcgagtcgag
tcgctgctcgtaactgctattagtaaggcttcggcccagcagagagccggtcgtgctgga
cgtactcgtccaggaaagtgcttccgactctacaccgagaaggcctacaagactgagatg
caggataacacataccctgagattctcaggtcgaatttgggctccgtggtgctacagctc
aagaagcttggtatcgatgaccttgtgcactttgacttcatggacccaccagctcctgag
accctgatgcgagccctggagctgttgaactatctagcggcgctgaacgacgacggtgac
ctgacagagctgggatccatgatggccgagttccctctcgacccccagctggccaaaatg
gtcatcgccagctgcgacttcaactgctccaatgagatcctttccatcaccgcaatgcta
tcagtcccacagtgctttgtgcggcccaccgaagctaagaaggcagccgacgagtccaaa
atgaggttcgcccacatcgacggggaccacctgaccttgctcaacgtctaccatgccttc
aaacagaaccacgaggcggtgcagtggtgctatgataacttcgttaactaccgctcgctg
atgtcggctgataacgtgcggcagcagctctcacgcatcatggaccgcttcaacctgccg
cgacgcagcacagagtttaccagccgagactattacatcaacatccgccgcgctctcgtc
acaggcttcttcatgcaggttgctcacctggagcgcaccggccactatctcacagtgaag
gacaaccaggtggtccagttgcacccttccaccgtactggaccacaagcccgagtgggtt
ctctataacgagtttgtgctgaccaccaagaactacatccgcacctgcactgatatcaaa
cccgaatggctggtgaaaattgctccaggatactacgaaatgagcaacttccctcaatgc
gaggctaaaaggcaactggagcgcatcgtcgctaaacttcaaaccaaggagtactctcaa
tactaa
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integrated database retrieval system