Carassius auratus (goldfish): 113051740
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Entry
113051740 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113051740
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113051740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113051740
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113051740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
113051740
NCBI-ProteinID:
XP_026071559
Ensembl:
ENSCARG00000036171
UniProt:
A0A6P6KGW0
LinkDB
All DBs
Position
32:18271472..18386629
Genome browser
AA seq
2231 aa
AA seq
DB search
MSLLTQLRLLLWKNFTLRRRQKVRLLVELLWPLFLFFILVAVRSTNNPVYKSQCHYPNKP
LPSAGVLPWLQGMLCNMQNPCVSFPTPGEAPGQVNNFDNSTVTKVLVEVQSLLADPSLFS
NVRWISEDIGRWTSVLQNANPAAGQSIPLHSLLRTNETFSDYLTKSLLVPNTTVTRLMRT
KVRLGQLPSLSADGDLRSLLCGPSVSHILDFNSTNQKEEFQNITCSLTANQLLQARRVFL
QNLDNMKLLNALPSALALDRLQVGTLMGQTSAHIAPLMTGMSNFKSSVLLSAVETLDFRS
DPFGSLSQLMCGAESNSTSRAAVRTASNQQNTSTATTNNNPTTSTNTSDFCKNLTDTLES
TSSLRLIWRTFRPFLQGKILYAPDTNVTRSIITEANRTFDALAKVGELADAWLENEDVLW
DFFNNGTQINTLRTLLKNPVLAAVLDQQLEDSGLSSAIISSFLFNGPESERPAGMKAFDW
RNVFNATSSAAQQITQILTCFDLDKFKGVSSEAVLVEQSLKLLSQDRFWAGLVFTDLDPS
DPRTPPHIKYKIRMDIGDTERTNKIKERSWSPMARDNPFNDLHYVSGGFVYLQDMVDRGI
IKVQTGVSQPLGVYAQQMPYPCYVDDAFVSSIGTILPMFLVLAFIYTASETIKGLVLEKE
LRLKEVLRIVGVRNSSMWSCWFIENMVLLTIPCALISVMVKYGKVLRYSDPSVIFVFLLV
FCMATVMQCFFISVFFSRANLAAACGSLIYFLLYLPHVLCYAWRDVLGFGTKIATSLLSC
VAFGYGCENFSRYEEQGIGIQWSNIRVSPQENDRYSFIVSIFMMLFDAFIYWILTWYIEN
VYPGQYGIPKPWYFPFTSSYWCGTPVGSDAHPDLLHELENQSGYLEKPPPGMKPGVCIRN
LVKVYKTGNKLAVDGLSLDFYQDHITSFLGHNGAGKTTTMSILTGLFAPTSGTAYINGYD
IRSDMDTIRTHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSSKEVKKEIDQMIRDVGLPH
KRKDLVKNLSGGMQRKLSVAIAFVGGSNVVILDEPTAGVDPYARRGIWELLLKYKTGRTI
ILSTHHMDEADILGDRIAIISHGRVCCCGSSLFLKKTYGRGYYLTLARANQDRVMAQRAP
LIKECDKSSVDEGIGSESISSLDPPDVADLSRLVRRHMPEAEFLEVIGQELVYVLPYTGV
TNGSFASLFKELDLEKSALGVTSYGISDTSLEEIFLKVAKDTGVDVESHDKKESPKQKRR
SSSRISGIQNISSALEGKDANAVKNDAKVRFTSRVEDTQRPMRANGKGSYIITGWSLIKQ
QFLALFIKRFHHARRSRRGIIAQIVMPAFFVCLALIFSLIVPPFVEYPSLELQPWMYGAP
QNTFYSFDDPAVDQVERVTNALLSSPGFGTRCMSTNPIPKLPCNPEGGTDWFTPAVTPSL
SEIFEKGNWSMENPSPDCQCGTPQRSIMLPDCPLGAGGLPPPQRTQNTTDTLQNLTARNM
TDFLLKNYQKSGKIRYGGISVGGVNSQVKLNESDITAVIDDFRSMLNISQFNQNEHIFQA
IQLFLVELGTRDNLKVWFYNQGWHSLVSFLNVASNGILRGNLPAGRREQEFGITTYNHPL
NLTKEQLSFVALATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPT
VYWLANFAWDMCNYIVPCIIVIIIFLCFQTKSYVSPPNLPALILLLVLYGWSITPTMYPA
SFLFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDPNITRINDIVKQVLLVFPHFCLG
RGLMDMAKNQAIATLYQNLGEDRFENPLSWNMVGKNLFAMSIQGAVMFSVTLLIQYKFFC
KPRSMKSLPPSSGKEDEDVALERERVQRGGAQNDLLQICDLTKMYRKKKTPAVDKVCVGV
PAAECFGLLGINGAGKTTTFKMLTGDISPTSGDAFLNGYSIRTDMPLVQQNMGYCPQFDA
IDELLTGREHLEFYARLRGVPEKEVSMVAEWGVQKLGLVKYSEKSAGTYSGGNKRKLSTA
IALIGCPPLVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAI
MVNGQFKCLGSIQHLKSRFGEGYTLIIRVSAAQADLCTVETFVRDTFPGSTLKEKHHNTL
QYQIPQGEGALAHIFSQLSKHQQQLHVEDYSVSQTTLDQVFVSFARQQCDEEDGAFENDV
DLNDEIQTSAT
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctgacacaactccgactgttactgtggaagaactttactctacggaggaga
cagaaggtgcgtttgctggtggagttgctttggcctctgttcctgttcttcattctcgtg
gcggtcagatccaccaataatcctgtttataaaagccagtgccactacccaaataagccc
ctcccatcggcaggtgtgttgccatggctacagggcatgctgtgtaacatgcagaacccg
tgtgtgagtttccccacacctggcgaagcacctggacaggtgaacaacttcgacaactcc
acagtcacaaaggttttggttgaagtgcagtcgctcctggcggatccctctctcttcagc
aacgtcagatggatctctgaggatatcggacgatggacgtctgtcctgcagaatgcaaac
ccggccgcaggtcagtcgattcctcttcacagtttgctgagaaccaacgagacgttctct
gattatctgaccaaaagcctcttggtgccaaacacaaccgtcacgaggctgatgaggacg
aaagttcgcctcggacagctgccttcactgtcagctgatggagatctgcgctcgcttctc
tgcggcccttcggtcagtcacatcctggactttaactcaaccaatcagaaagaggagttt
cagaacatcacatgctccctgacagccaatcagctgcttcaagccagacgcgtcttcctg
cagaatctggacaacatgaaactcctgaatgcacttccatcagctctggctctggaccgg
ctgcaggtgggcactctgatgggtcaaaccagcgcccacatcgctccgctcatgaccggg
atgtctaactttaagtcttcagtgctgctgagtgcagtagaaacgttggacttcaggtca
gatccgttcgggagcctctctcagctgatgtgtggagcagaatctaactcgacgagcaga
gctgctgtgagaacagcgtcaaatcaacaaaacacaagcaccgcaacaaccaacaacaac
cccacaaccagcaccaacaccagtgacttctgtaagaacctgacggacacgctggagagc
acctccagtctgcgtctgatctggaggaccttccggccgttcctgcagggaaagatcctc
tacgctcctgacactaatgtcacgcgcagcatcatcacagaggccaaccgcacatttgat
gcgctggctaaagttggagaactggcagacgcctggctggagaatgaagacgtactctgg
gatttcttcaacaacggcacacagatcaacactctgaggactcttctgaagaaccctgtg
cttgcagcagttctggaccagcagctggaggactccggtctgtcctcggcgatcatcagc
agcttcctgtttaacggtcccgagtctgagcgtccggccgggatgaaagccttcgactgg
cgtaacgtcttcaatgccaccagcagcgcagcgcagcagatcactcagatcctcacgtgt
tttgatctggacaagtttaaaggagtcagcagcgaggctgtgctggttgagcagtcttta
aagctcctgagtcaggaccgcttctgggccggtctggtcttcacagatctggaccccagt
gacccgaggacccctccacacatcaaatacaagatccgcatggacatcggggacaccgag
aggacgaacaagatcaaggagaggtcctggtccccgatggcccgggacaacccgtttaat
gacctgcactacgtgagcggaggcttcgtgtacctgcaggacatggtggatcgaggaatc
attaaagtgcagacgggagtcagtcagccgctcggcgtctacgcacagcagatgccttac
ccgtgttacgtggacgacgccttcgtttcgtccattggcaccatactgcccatgttcctg
gtgctggcgttcatctacacggctagcgagactatcaaaggcctggttctggagaaggag
ctccgtctgaaggaggttctgcggattgttggggttcgaaactcttccatgtggtcctgc
tggtttatagagaacatggttctgctgactattccctgtgctttgatctcagtcatggtg
aagtatggaaaggttctgcgatacagtgacccgtctgtgatctttgtcttcctcctggtc
ttctgcatggccactgtcatgcagtgctttttcatcagtgtgtttttctctcgggcgaat
ctggcagccgcctgtgggagcctgatttacttcctgctctacctgcctcatgtgctttgc
tatgcctggagggacgtcctgggattcggcaccaagatcgccacgagcctgctgtcgtgt
gtggccttcggatacggctgtgagaatttctcccgttatgaagagcagggcatcggcatt
cagtggagcaacatccgggtcagtcctcaggagaacgaccgctactccttcatcgtctcc
atcttcatgatgctgttcgacgccttcatttactggatcctcacctggtacatcgagaac
gtctatcctggtcagtatggcatcccgaagccctggtattttcccttcacatcctcatac
tggtgcgggaccccggtgggatctgatgcccatcctgacctgcttcatgagctggagaat
cagagcggttacctggaaaaacctccgcctgggatgaagcccggagtttgtatccgaaac
ctggtgaaggtctataagacgggaaataaactggccgtggacggactcagtctggacttc
tatcaggatcacatcacctcgtttttaggacacaacggagctggaaaaaccaccaccatg
tcaatactgacgggtcttttcgctcccacctcgggtacggcttacattaacggctacgac
atccgctccgacatggacaccatcaggactcacctgggaatgtgtccacaacacaacgtc
ctcttcaacgatctgacagtggaagagcacatttacttctacgctcgtttgaagggtcgg
agctctaaagaggtgaagaaagagattgatcagatgattcgagatgtgggtctgcctcac
aaacgcaaagacctcgtcaagaacctctcaggtgggatgcagaggaagctgtcggtcgcc
atcgccttcgtgggaggatccaatgttgtgattctggacgagccgacagcgggagtcgat
ccttatgcacgcagaggcatctgggagctgctgctcaaatacaaaacaggtcgtaccatc
atcctgtcgacgcatcacatggatgaagcggatattctgggtgatcgtattgccatcatc
tctcacggccgcgtctgctgctgcggctcctcgctcttcctcaagaagacgtacggtaga
ggctattacctgacgctcgcgcgggccaatcaggatcgagtcatggcacaacgagccccg
ttgattaaagagtgtgataagtccagtgtggacgagggcatcggcagtgagagcatcagc
agtctggatccaccagacgtggccgatctgagtcgactggtgcggcggcacatgccagag
gctgagtttctggaggtcataggtcaggagctggtgtatgtgctgccatatacaggtgtc
acgaacggcagcttcgcttccctctttaaagagctggatctggagaagagcgctctgggc
gtcaccagctatgggatatcagacaccagtctggaggagatttttctgaaggtggctaaa
gacacgggtgtggacgtggaatcccatgataagaaagaatctcctaaacaaaagcgcaga
agcagctcaaggatatcaggaatacagaacatcagctcagcactggaaggcaaagatgca
aacgctgtgaaaaatgatgcgaaggttagattcactagtcgtgtggaggacacccagcgg
cccatgcgtgcgaatggcaaagggtcgtacatcatcacgggttggtcactgatcaaacag
cagtttttagctctttttatcaaacgtttccatcatgcccgcagaagccggaggggaatc
atcgctcagattgtcatgccggcgttcttcgtgtgtctggctctcatcttctctctgatt
gttcctccgtttgttgaatatcccagtctggagcttcagccctggatgtatggagcacca
cagaataccttctatagtttcgatgatcctgctgtagatcaggtggagagagtgacgaat
gctctgctcagttcaccaggattcgggacgcgctgcatgagcaccaaccccatacctaag
ttgccgtgtaacccagagggaggcactgattggttcactccggcggtgactccgtccctc
agtgagatctttgagaagggaaactggagcatggagaacccgtcgccagactgccagtgt
ggcacaccgcagcgcagcatcatgctccccgactgcccgctcggagccggcggtttacca
ccaccacagagaactcagaacaccacagacaccctgcagaacctcacggcgcgaaacatg
accgacttcctgctcaagaactaccagaaatcaggaaagatacggtacggcgggatctcg
gtgggtggcgtgaactcgcaggtcaaactcaatgaatctgacatcacagcagtgatcgac
gacttcagatcgatgctcaacatctcgcagtttaatcagaatgagcacattttccaggcc
attcagttgttcctggtagagttgggcaccagagacaatctgaaggtgtggttctataat
cagggttggcattcgctcgtgtcgttcctgaacgtggccagtaacggcattctgagagga
aatctgccggcaggacgacgagagcaagagttcggcatcaccacatacaaccacccactg
aacctcaccaaagaacagctctcgtttgtagcgctggcgacgacttctacagatgtggtg
gtgtcgatctgcgtgatcttcgccatgtccttcatcccagccagcttcgtcctcttcctc
atccaggagcgcgtcagtaaagccaagcacctgcagttcgtgagcggcgtcaaccccacc
gtctactggctggccaacttcgcctgggacatgtgtaattatatcgtgccgtgcatcatc
gtcatcatcatcttcctgtgtttccaaacaaaatcatacgtctctccaccgaacctgcct
gccctcatccttctgctggtgctgtatgggtggtccatcactccgacgatgtatcccgcc
tccttcctgttcagtgttcccagcacagcgtatgtggttctgacctgcatcaacctcttc
atcggcatcaacggcagcgtggccacgtttgtcatggagctcttcgacgacccgaacata
acccgtatcaatgacatagtcaaacaggtgctactggtgttccctcatttctgtttggga
agaggcttgatggacatggccaaaaaccaggccattgccactctctaccaaaacctgggt
gaagaccgctttgaaaatcctctcagctggaacatggtgggcaagaatctgtttgccatg
tccatccagggggccgtcatgttcagcgtgacactgctcatccagtacaagttcttctgc
aaacccaggtcgatgaagtcactaccaccatcttcagggaaagaggatgaagacgtggct
cttgagcgtgaacgtgtgcagaggggcggagctcagaacgacctgctccagatctgtgac
ctcactaagatgtaccgtaagaagaagactccagccgtggataaagtctgtgtgggtgtt
cctgctgcagagtgctttggtttgctggggatcaatggagcaggtaaaactacgactttt
aaaatgctgacgggagacatcagcccgacgtccggagacgctttcctgaatggatacagc
atccgcactgacatgccgttagtgcagcagaacatgggttactgtccgcagttcgatgcg
atcgatgagcttctgacgggacgagaacatctggagttctacgcgcgactccgcggggtt
cccgaaaaagaggtttccatggtggctgaatggggcgttcagaagctgggtctcgtcaaa
tactcagagaaatcagcaggaacttacagcggcggcaacaagcgcaaactctccaccgcc
attgctctgattggctgccctcctctggtcttcctcgacgagcccaccaccggtatggac
cccaaggcccgccgttttctgtgggactgtatcctcagcgtgattaaagagggcagatct
gtgatactcacctcacacagcatggaggagtgtgaagcactctgcacccgcatggccatc
atggtgaacggacagttcaaatgcctgggcagcatccagcacctgaagagcaggttcggg
gaaggatacacactgatcatacgcgtgagtgcagctcaggccgatctgtgcacagtggag
acttttgtccgtgacacatttcccggaagcactttgaaagagaaacatcacaacactctg
cagtaccagatcccacagggagagggagccctcgcacacatctttagccaactgagcaaa
caccagcagcagctgcatgtggaggattactctgtgtcccagaccacgctagaccaggtt
tttgtgagtttcgcgcggcagcagtgtgatgaagaggacggagcgtttgagaatgacgtg
gatctgaatgatgaaatccaaacatcagcgacatga
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integrated database retrieval system
