Carassius auratus (goldfish): 113051859
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Entry
113051859 CDS
T07313
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113051859
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113051859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_10
TPR_17
TPR_7
TPR_11
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
113051859
NCBI-ProteinID:
XP_026071798
Ensembl:
ENSCARG00000030806
UniProt:
A0A6P6KHN8
LinkDB
All DBs
Position
32:22973488..22991958
Genome browser
AA seq
1160 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKDLINQSTLLYTMA
DKIIMYDQSHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLDKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKITVQHSDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKFYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPSRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLRARHAAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRSFSYLSKAGDKMRFDLALAAGEARQCSDLLSQAQYHVARARKQDEEEKE
HRAKQEQERDLLRQQMLKEQQERKSKEAEEQKKLLEQRAQYVEKTKGLLNFSESMKAAAK
EKKKGGSGRRKKGGDFDDFVNDDSDEDLPIKKKKKKKAGSGSEVEDGEEDGEKKPRKKRR
RPARREDEGSDDEEGGSRPKKQRKPRERKKIEKPERMPPSLKGKIKSKAIISSSDSSSDE
DGLKIAEDRNPRDSGSGSDEGEGHRKHIASDSDSNEERNRSGSEAGSPQRSGRSDEDESG
SDRPVKRRRPQQQSDSEQSDNESKKSRSEGSDDESQAGSPAAASDRGSEIEGSPQRSDND
SEPEGSNNEASNRGSDDDSD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccatcgaaatccctctgcgggacacagatgaggtcattgagcttgac
ttcgaccagcttccagaaggagatgaagtcatcagtatcctcaaacaggagcacacacag
ctgcacatatggatcgcactcgctttggagtactacaaacaaggcaagacggaggatttt
gtcaagttgctggaggcggctcgcattgatggaaacctggactacagagaccacgagaag
gaccagatgacatgtttggacacactggcagcttattatgtccagcaggctcggaaagag
aagaacaaggatgcaaagaaagacctcatcaaccagtccactcttctgtacaccatggca
gacaagatcatcatgtacgatcagagccatctgctgggaagagcttgcttttgtctcctg
gaaggagataagatggatcaggcagatgctcagtttcagtttgtactcaaccagtcgaca
aacaacatccctgcactcctgggtaaggcgtgtatctccttcaacaaaaaggattacaga
ggagctctagcctactacaaaaaagctctccgcactaaccctggctgtccagccgaggtg
cgactaggcatgggccactgctttgtaaagctcaacaaactagataaagctcgactggcg
tttggcagagccctggagctcaactccaaatgtgtgggagctttggtggggttggctgtg
ctggagctcaacaacaaagaggccgactccatcaagaacggggtgcagctgctttccaga
gcatataccattgaccccagtaaccccatggtgctcaatcacctggccaatcatttcttt
ttcaagaaggactacagcaaagtgcagcatctggctcttcatgcttttcacaacacagag
gtggaggctatgcaagcggagagctgctatcagttagctcgatccttccacgtccaggag
gactacgaccaggccttccagtactactatcaggccactcaatttgcgtcgtctactttc
gtactgcccttcttcggcctgggccagatgtatgtgtatcgtagagacaaagagaacgct
gcacagtgctttgaaaaggtcctgaaggcttatcccaacaattatgaaaccatgaaaatc
cttgggtctctttatgccacatcggatgaccaggagaagagagacattgccaaggaacat
ctgaaaaaaatcacagtgcagcattccgatgatgtggaagcctggattgagctcgcccag
attttggaacaaacagatattcagggtgctctttctgcatatggcacggccactcgtatc
ctccaggaaaaggtccaagcagatgttcctcctgagatcctcaataatttaggggcttta
cacttcagattgggaaaccttggcgaggcaaagaaatacttcttggcttctttggagagg
gcaaaagctgagggcgagcatgatgagcactactacaacgccatctcagtcacaacctcc
tataacctggccagactctacgaagccatgtgcgagttccacgaggctgagaaattctac
aagaacatcttgagagagcatcccaactatgtcgactgttacttgagacttggagcgatg
gcacgtgataagggaaatttctatgaagcctctgactggtttaaagaagcccttcagatc
aatcaggaccaccccgatgcctggtctctgattggtaaccttcacttggcgaagcaagag
tggggtcccgggcagaagaagtttgaacgcatccttaagcagccctccactcagaacgac
acctactcgatgctggcgctgggaaacgtgtggctccagacactgcatcagccctccaga
gaccgagagaaggaaaagcggcaccaggatcgagctttggcgatctacaaacaagttctg
aggaatgattccaaaaatctgtatgctgccaacggcataggtgctgtgttggcacacaag
ggttatttccgagaggcacgggatgtttttgcccaggtccgagaggccacggcagagatc
agtgatgtctggctgaatctcgcacacatctatgtggagcagaagcagtacatcagtgca
gtgcagatgtatgaaaactgtttgaagaaattctacaagcatcagaacacagaggtgctg
ctgtatctggcccgagcgctcttcaaatgtggcaagctgcaggagtgcaaacagactctt
ctgagggctcggcacgcggctcccagtgacacggtgctgatgtttaatgtggcgctggtg
ctgcagcgcttggccacgctggtgctgaaggacgagaagagtaatctgaaggctgtgttg
agtgcggtgaaagagctggagttggctcacaggtcattcagctatctcagtaaggctgga
gacaaaatgagattcgaccttgcgctggctgcaggcgaagccaggcagtgctctgatttg
ctaagccaggctcaataccatgtggcccgagctcggaaacaagatgaggaagagaaggag
caccgcgccaaacaggagcaggagagagacctgctgcggcagcagatgctgaaggaacag
caggagaggaagagcaaagaggccgaggagcagaagaagctgctggagcagagagcccag
tatgtggagaagaccaagggcctgctcaacttctccgagtccatgaaagcagcagcaaag
gagaagaagaaaggaggcagtggacggcgcaagaaaggaggcgactttgatgactttgtc
aacgatgactctgatgaggacctgccgatcaagaaaaagaagaagaagaaagctgggagt
ggcagtgaagtggaggatggtgaggaggatggagagaagaaaccccgtaaaaagaggagg
agaccagctagaagagaagatgaaggttcagatgatgaggaaggaggctcaaggcctaaa
aagcagcgcaagcccagagagcgcaagaagatcgagaagccggagcgcatgccgccgtct
cttaaagggaagatcaagtccaaggcaatcatttcatcctctgattcctcctccgatgag
gatggcctgaaaatagcagaagacagaaaccccagggacagcggctctggttcagacgaa
ggtgaaggccacaggaaacacatcgcttctgacagcgattccaacgaggagcgtaaccgg
tcgggcagtgaggcgggcagcccccagcgctctggacgctcagacgaggacgagtctggc
agcgatcgcccggtgaagaggaggagaccacagcagcagtccgactcggagcagtcagac
aacgagagcaagaagagccgctccgaaggctctgacgacgagtctcaggccggatctcca
gccgccgcttcagatcgaggctccgagatcgaaggctctccgcagaggtccgataacgac
tctgagccggaggggtccaacaacgaagcctccaacagaggatctgatgatgacagtgac
taa
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integrated database retrieval system
