Carassius auratus (goldfish): 113051948
Help
Entry
113051948 CDS
T07313
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113051948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113051948
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
GTPases
113051948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
113051948
NCBI-ProteinID:
XP_026071929
Ensembl:
ENSCARG00000010968
UniProt:
A0A6P6KHZ1
LinkDB
All DBs
Position
32:complement(26408443..26493209)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTQINVLRMTRATGTTHFCASWTRGNIKVKMRDASLEKIIALQKKTSHIRNLCILAHVDH
GKTTLADSLVASNGIISSRLAGKLRYLDSREDEQIRGITMKSSGISLHYTTGNGHCGLLL
LQHHVLLMYSWLRAVVVIAGGNEYLINLIDSPGHVDFSSEVSTAVRLCDGAIIVVDAVEG
VCPQTQVVLRQAWLENIRPVLVINKMDRLIVELKLTSQEAFTHLQKLLEQVNAVTGSLFT
SKVLEERAEKDAEAQSSCTENSSADQVYDWSAGLEETDDSDLYFSPDRGNVVFASAIDGW
GFRIHQFAEMYSQKMGIRFSVLLKTLWGDFYLNAKAKKIMKGAQSKGKKALFVQLVLDNI
WNMYDAVVTRRDKEKVEKMVTSLGLKVMSRDLRHSDPKVLLSAICSQWLPVAQAVLSMVC
EKLPCPAEISAERVEKLMSVGARRFDSLPEQTQELKKAFLDCSAGETAPVIVFVSKMFAV
DSKALPQNKQRPLTQEEISQRRELARQRHAERQAANQSADSPRSADAGGTSTQASPASGA
VTDALCAQTEALSVKAAVEEENKEHFVAFARVYSGVIRKGQKVFVLGPKYNPSLALRALP
EGCSVADVLPSIPHMSCCTVDSLYLLMGRELEELDEVPSGNVLGIGGMEEFILKSATIST
SPACPPFTPLNFEATPIVRVAVEPKHPSDMPKLVRGMRLLNQADPCAEVLIQETGEHVLV
TAGEVHLQRCLDDLRERFAKIEISASEPIIPFRETVIRPPKMDMVNEDLGKQQKVAVIHQ
LKEEHMKNPESVQVDSTGLVTLTTSNKMATVGVRAIPLPEEVTRLLEDNVELIRTMEQFS
LFAWEDKTLDINQKILENIQDFKVKLESNLQGHKWRGAVEHIWAFGPRRCGPNILLNNIE
GYRRPSIWQCLEREKETERAEIRDFDNSIVSGFQLATLSGPMCEEPLMGVCFSVETWDMK
ISTPLAQRDSFDEDSQPAEPKYDDQSQRSDIHETNSNRSRSRAEAAGSSVDCYGPFSGQL
IAAMKEACRYAFQARPQRLMAAMYTCEIMATAEVLGRMYAVLSKREGRVLQEEMKEGTDM
FIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIGSDPFWVPTTEEEYLHFGEKA
DSANQALKYRNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagattaacgtattacgtatgacacgtgcgacgggcactacgcacttttgcgct
tcctggactagaggaaacataaaagtcaaaatgcgtgacgcaagtttggagaagataata
gcactgcagaagaaaacatcacacatcaggaatctgtgcattcttgctcatgtagatcac
gggaagacgacattagcagattctctggtggcaagtaatgggattatatccagccgttta
gctggaaagctgagatatctggacagcagagaagatgagcagatcaggggaatcactatg
aagtccagtggtatttcattacattacacgacaggtaatggccactgtggtctgttgctg
ctccagcaccatgtactgctcatgtactcatggttaagagctgtcgttgtcattgcagga
ggaaacgagtacctcattaatctgatcgactcgcccggtcacgtggacttctcctcggag
gtgtccactgccgtcagactgtgtgatggggccatcattgttgttgatgcggtcgaggga
gtgtgtccgcagacgcaagttgttctacgacaagcttggctggagaatatccgtcctgtt
cttgtcatcaacaaaatggaccggctgattgtggagctgaagctcacttcacaggaggcg
ttcacacacctgcagaaattactcgagcaggtgaatgcagttaccggctcgttattcacc
tctaaagtcctggaggagcgagcggagaaagacgcagaagctcagagcagctgtacagag
aacagcagcgcagatcaggtgtacgactggagtgcagggttagaagaaaccgatgactcg
gacctctacttcagtcctgaccgcggaaatgtggtgtttgccagcgctatagacggctgg
ggcttcagaattcatcagtttgctgagatgtacagtcagaaaatgggcatccgcttctcg
gttctgctcaagaccctgtggggcgatttctacctcaacgccaaagccaaaaaaatcatg
aagggagctcagtccaaaggaaagaaagctctgtttgtgcagcttgtcctggataatatc
tggaatatgtatgatgctgtggtcactagaagggacaaagaaaaggtggagaagatggtg
acctctctggggttaaaggtcatgtctcgtgacctgagacactcggaccccaaagtgctc
ctcagtgccatctgcagccagtggcttcctgtggctcaagctgtgctctcaatggtgtgt
gaaaagctgccctgcccagctgagatctcggcggagagagtggaaaagctgatgagcgtg
ggagcgcgcaggttcgactctctgcccgagcaaacacaggagctaaaaaaggcatttcta
gattgttcagctggtgagacggcgccggtaatcgtctttgtgtcaaagatgtttgctgtg
gactccaaagctctgccacagaacaaacagaggccgttgactcaggaggagatctcccag
agaagggaactggccaggcagcggcacgcagagagacaagctgccaatcagagcgcagac
agcccccggtcagctgatgctggagggacttcaacccaagcaagcccggccagcggtgct
gtgacagatgctctgtgtgcgcagacagaagctctttcggtcaaagctgcagtcgaggag
gaaaacaaagagcattttgtggcctttgcacgagtctacagcggcgtcatcagaaaaggc
caaaaggtgttcgtgctcggacccaaatacaacccgtcactggcgctcagagcgctgcct
gaaggttgttcggtagctgatgttttacccagcatccctcacatgtcctgctgtaccgtg
gacagtctctatctgctgatgggccgcgagctggaggagctggatgaagttccctcagga
aacgttctgggtattggtggaatggaggaattcattctcaagtcggccaccatctcaaca
tctccggcctgcccgcccttcacgccactcaactttgaagccacgcccatcgtcagagta
gcagtcgagcccaaacatccaagtgacatgccgaagctggtgcgtgggatgaggttactg
aaccaggccgacccgtgtgccgaagtgttgattcaggagacaggagagcatgttctggtc
actgcaggagaagtgcatctacaacgctgcctggatgacttgagagagaggtttgctaaa
attgaaatcagtgcatccgaaccaatcattccgttccgtgagacggtgatccggcctccc
aaaatggacatggtgaacgaggacctgggaaagcagcagaaggtggcggtgattcaccag
ctcaaggaggaacacatgaagaatcccgaaagcgttcaggtggattccaccggtctggtc
acgctcaccacctctaacaagatggccacggtcggggtgcgggctattcctcttcctgag
gaagtcacccgccttctggaggacaatgtagagctcatccgcacaatggagcagttcagc
ctgttcgcctgggaggacaagaccctggacatcaaccagaaaatcttggagaacatccag
gatttcaaggtgaagttggagagcaacctgcaaggccacaaatggaggggagcagtggag
catatctgggcatttggtccgcgccgttgtgggccaaatattctcctcaacaatatcgag
ggctaccggagaccctccatatggcaatgtctggaacgagagaaggaaaccgaacgggcc
gagatcagagactttgacaacagcattgtgagtggcttccagttggccacgctttctggt
cccatgtgtgaggaacctttgatgggggtttgcttctctgtcgagacctgggacatgaag
atttcgacacctctagctcagcgagactcattcgatgaggattcccaacctgcagagcca
aaatatgatgaccaaagtcagcgttctgacattcacgagacgaactctaaccgaagccgg
agcagagcggaggccgctgggagttcggtggactgttatgggcctttctcgggacaactc
atcgctgctatgaaggaggcctgcagatatgccttccaagctagacctcagcggctgatg
gctgccatgtatacatgtgaaatcatggccactgccgaggtcctgggtcgaatgtatgcc
gttctgtccaagcgggaaggacgagtcctacaagaggagatgaaggaagggacagacatg
ttcattattaaggctgtacttcctgtcgccgagagtttcggattcgctgatgagatcagg
aagaggacgagtggcctggccagcccacagctagtgttcagccactgggaggtcatcggc
agtgatccattttgggttcccactactgaagaggagtacttacactttggagagaaagca
gactcggccaatcaggctctgaaatacaggaatgccgttcgcagacgcaaaggcctctac
gtggaggagaagatcgtagaacatgcagaaaaacagagaactctcggcaagaacaaataa
DBGET
integrated database retrieval system
