Carassius auratus (goldfish): 113052002
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Entry
113052002 CDS
T07313
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04020
Calcium signaling pathway
caua04080
Neuroactive ligand-receptor interaction
caua04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113052002
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113052002
04082 Neuroactive ligand signaling
113052002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113052002
Ion channels [BR:
caua04040
]
Ligand-gated channels
Glutamate (ionotropic)
113052002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
113052002
NCBI-ProteinID:
XP_026072025
Ensembl:
ENSCARG00000009070
UniProt:
A0A6P6KII1
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Position
3:24482564..24548488
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AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVCSAPRCQCRPFGMIEPTVNVAVVFSGSAYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRSLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKMMEEYNWDSFVVVTSL
YPGYDTYVDKIRSVIDTSYFLWELQDILTFDMSADGMNDFRARRLLQQIDAQVLLVYCSH
DEAQYLFTMAREVGLVGPGYIWLIPSLAVGNPNMPPPDSFPVGLISIITDRWKMSLRNRV
RDGVAIVVKGVENFRKQRGFIPDGHMDCQSLVRPSTNDTLYRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRLWDKVGNYESGILQMRYPVWPRYGTFLEPVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVNAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGETQKLQTVWLTGICRNERKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSIRKSERLDFLLAISRGIYSCFNGVEDMDRKGNMQSPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPESARPSLPTCLIGTDFSHSRLP
CITSVTDNHSPYPQNMDSTTQHLLEKTHMGTRPTSLRYTLPARTTHHHIYERTLPISSLS
SPHIAMRDPPPPTAPKPHVYLDQSYHHPTSGYVSYHDFQVPDIFVEHQEPLGSHKQYMAG
LGRKKRSHSYVAASPETRRRDDYDVPQSCLAELKSNRLVENHSHTTPCMRSHFQRPGSSC
KSCAKLYLEPDMDDVPLLGKDKMNRRASFLRATWGGDRIRQLDEKPSTSASSTSCINMPD
LFPRVVVTNPKPSKMYGNTGNSLRYNMAVEPAYLDPAHMGSYPYKPQKFKYSKSIRLPSY
REAILKNTAALRRSSSTLVHGHYSTYLNSYTDLPVYLGPLPQGPTQFHEHSKDTCHLFPF
ANHCPENAALVPRLGSRHVLYQSTAIGGYEGPRRSNDESLHTVPVASVHRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccgttgctgctgctgctg
tccgtctgctctgccccccgctgccagtgccgcccgttcgggatgattgagcccaccgtg
aacgtggcagtggtgttcagcggctccgcctaccagatggagatcaaggggcgactgagc
cgggagaacttcctggacctaccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccacgctctctactgacacgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tccacgcagacggccgtgcccatagtgggcatcagcgggggatccgccgtcgtcctgcct
cacaagggtgacggttctaccttccttcagctgggctcttccatcgagcagcagatcaat
gggatgttcaagatgatggaggagtacaactgggacagttttgtggttgtgaccagcctg
tacccgggctatgacacctatgtggacaaaatccgctccgttatcgatacgtcttacttc
ctctgggagttgcaggacatcttgacatttgacatgtcagccgacggcatgaacgacttc
cgtgcccgccggttacttcagcagatcgacgcgcaggtgctgctggtgtactgctcacac
gacgaggcccagtacctcttcaccatggccagggaagtgggtttggtgggtccggggtat
atctggcttatccccagccttgcagtcggaaaccccaatatgcctcctccagacagcttc
cccgtgggattgatcagcattatcacagatcgctggaagatgagcttgagaaacagggtc
agggatggtgtagccatcgtggtgaaaggagtggagaacttccgcaaacagagagggttt
attcctgatggacacatggactgtcagagtctggtgcggccatccaccaatgacactctc
tacaggcacatgctgaatgtatcctgggagaacactgacttttccttcaacagtgatgga
tatctggtcaacccttccatgatcataatcaccctggaccgcggtagactgtgggataag
gtggggaattacgagtcgggtatccttcagatgagataccctgtctggccacgttatggg
accttcctggagcctgtgtctgataaccgtcacttgacagtggccacactggaggaaagg
ccttttgtgattgtagaagctgtggatcctgttactggcacctgtctcagtaacaccgtc
ccctgcagacggcagtcaaacaagactgaaacgatagtcggacacactgagccttacacc
aaactatgctgcaaaggcttctgcatagacatcctgaaaaagctctctcgcaacatcaag
ttctcctacgacctctacctggtcaccaacggcaaacatggcaagctggtacgagggatc
tggaacggtatgatcggagaggtgttttataagcgagcggacatggccattggctctctg
accataaatgaggagcgctctgaaatcattgacttctctgtgccgtttgtggagactggc
atcagtgtgatggtggccaggagcaatggaaccgtgtctccgtcagccttcctggagccc
tacagcccagcggtgtgggtgatgatgtttgtcatgtgtcttacagtcgtggcagtgact
gtgttcgtcttcgaatactttagtcctgtgggctacaaccgcagtctggtcaatgccaaa
gatccaggtgggccgacgttcaccattgggaagtcggtctggctgctgtgggggatcgtc
ttcaacaactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtgtgggctttctttgccgtgatcttcctggccagctacacagccaacctggcagccttc
atgatccaggagcagtacattgacactgtttctggactgagtgacaagaagttccagaaa
ccacaagaccaatatcctccattccggtttgggactgtgcccaatggcagcacagaacga
aacataaggagcaattatcctgaaatgcattcccacatggttaagtacaaccagaaaggt
gtagaggatgcactcaacagcctcaaaactgggaagctggacgccttcatatacgatgca
gctgtgcttaactacatggctggtaaagatgaagggtgtaaactggtgacaataggtagt
gggaaggtatttgcaacaacaggctatggtatcgcccttcagaaagaatctcgctggaag
cgtcccatagacctagctcttctccagttccttgctgatggtgaaacgcagaagctccag
acagtgtggctcactggtatctgtcgtaacgagaggaaggaggtgatgagctccaagctc
gacattgacaacatggccggagtgttttacatgcttttagtggctatgggtctcagcctg
ctggtctttgcctgggaacatctactgtactggaagctacggcattctatccgcaagtct
gagcgcttggacttcctgctggccattagcaggggaatctacagctgcttcaacggtgtg
gaggacatggaccgtaaagggaacatgcagagcccagatgtcaccaccagttacactcag
gccaacatgctgaagatgctccaaaccgcaaaggacattgtctcatctgcaagagttgaa
aactcactggacaatgctacaaagaccattgagaactggagtcgacgtgatccagagtca
gccagacctagtcttcctacctgcctcatagggacggacttcagccacagccgcctgccc
tgcattaccagcgttacagacaaccactcaccataccctcaaaacatggacagcaccact
cagcacttgttggagaagactcacatgggaacacggcctacctcactacgctacactctt
cccgcacgtaccacccaccaccacatctatgaacgaacgctacccatatctagcctcagc
agtccccatattgccatgagagatccaccacctcctacagccccgaaaccccatgtgtac
cttgaccagtcctatcaccaccctacctctggctatgtctcttaccatgactttcaggta
ccagatatctttgtggaacaccaagaacctttgggaagccataaacaatacatggcaggt
ctgggtcgcaaaaagaggtcccacagctacgtagcagcatctccggaaactagacgaagg
gacgactatgatgttccccagtcttgtctggctgagctaaaaagcaatcgccttgtggaa
aaccattcccatactacaccctgcatgagaagccacttccagagacccggctctagctgc
aaatcctgcgcaaagctgtatctagaaccggacatggatgacgttcctcttctggggaaa
gataaaatgaaccgccgcgcctcttttctcagggccacgtggggtggtgacaggatccgg
cagctggatgagaagccctccacctctgcatcctctaccagttgcatcaacatgcccgat
ctgttccctcgagtggtggtgaccaatcccaagccttcgaagatgtacggcaacactggt
aacagccttcgctacaacatggcagtggagccagcctatctggaccccgcccacatgggc
tcctacccgtataagccacagaagttcaagtactcaaagtccatccgccttccttcatac
cgggaggcgattctaaagaatacggcagcccttcggcgctcctcttccacactagtgcat
ggacactactcaacatacctgaactcttatacagacctcccagtgtatttgggtcctcta
ccacagggacccactcaattccatgagcattccaaagacacgtgccacctgtttcctttc
gccaatcattgcccggaaaatgccgccttggttccccgtttaggcagcaggcatgtattg
taccagagcactgcaattggaggctatgaggggcccaggcgctcaaacgatgagtcgttg
cacactgtaccggttgcttccgtgcacagggaccgcaggcaggttctagtggcacggaac
gtacacagtccctatgccccacggccctggggtagggtatctagtctggagtcagaggtt
tga
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