Carassius auratus (goldfish): 113052043
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Entry
113052043 CDS
T07313
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113052043
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113052043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113052043
NCBI-ProteinID:
XP_026072103
Ensembl:
ENSCARG00000021257
UniProt:
A0A6P6KII6
LinkDB
All DBs
Position
32:29680439..29683692
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AA seq
289 aa
AA seq
DB search
MYSMMEYEMKTTGQPHPHHNSPGMSPPVSGVGNAHHGSKTSCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKDYPDYK
YKPRRKTKALLRKDNPVGKYPLGAGSLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGEA
LGYPQQLHRYELSALQYPPAQTYMNGASSYSQMSYSGSPQQPSPVMSMVKPEPLSHSPTG
HHRGAFQGDLRDMISMYIPGGDASDGSNQRTYPGVQQHYLGGTVPLTHI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagtatgaaatgaagaccacgggtcaacctcatccccaccacaac
agtccagggatgtctcctccggtcagcggggttggaaacgcgcaccacggatctaaaacc
tcttgtccacccggcggggaccccatggacaaagtgaagcgccccatgaatgcgtttatg
gtgtggtcccggggtcagcggaggaagatggcacaggagaaccccaaaatgcacaactcg
gagataagcaaacgcctcggggcggaatggaaacttttaacggacacggagaagcggccg
ttcatcgatgaggccaaacggttgcgggccgtacacatgaaggactaccccgactacaaa
tacaaacctcggcgtaagaccaaagctctcctcaggaaggacaaccccgtcggtaaatat
cctctcggagccggcagcctgctggcatcagccgtggcacagggacaaggcgggagcccg
agaatggacggctatggctggggtcacaccggcgcttatatgggaatgcagggtgaagcg
ctcggatacccgcaacaactgcaccggtacgagctgtcagctctccagtacccgccggca
cagacctacatgaacggagccagctcttacagccaaatgtcatatagcggcagccctcag
cagcccagtccggtgatgtctatggttaaaccagaaccactatcccattcgcccactggc
caccaccgtggggctttccaaggggacctgagggacatgattagcatgtacattccaggt
ggtgatgccagtgatggctcaaaccagagaacctaccctggtgtccaacagcactatctt
ggtggaactgttcccctcactcatatctga
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