Carassius auratus (goldfish): 113052127
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Entry
113052127 CDS
T07313
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113052127
09122 Translation
03013 Nucleocytoplasmic transport
113052127
03015 mRNA surveillance pathway
113052127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113052127
03041 Spliceosome [BR:
caua03041
]
113052127
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113052127
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113052127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
113052127
NCBI-ProteinID:
XP_026072255
Ensembl:
ENSCARG00000060813
UniProt:
A0A6P6KJ36
LinkDB
All DBs
Position
32:complement(31158042..31177019)
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AA seq
1250 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKTALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTQN
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADETQSPAGPETDEHTT
TKDGTSFLPDKHHIIHSHLSATQSGGGGLPQDPGLMGSHRLDTGPVPVSQESADSKAGRI
RHPSFPPGHEEVATPSPPRAVASLSVRVVGQPERQGLPLMMPRSQEREGTAPVEAGPAHS
VLQLSRSARAAAYAQVDSDDSDEDDDDSDDNNEWGPTSHVKKSIRTPPVHTPPAAAPQRS
RRKLQPPQHIPPQPQPVHQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPNDQDEPAGLAE
GAAPGAGVASPPSLNRQESSSSSRSSSPEPRTRRPGPLSLLVRKMESEGVFGAQRVELEE
EGEMEVEKQQDGEAEVQDSAQQLVGPGVSVSAPTMPPAQQDAQDSGLLEQRRGKQKSEER
EKVDETSAPFHLTSPTTLPPRSPHIFSEVPPPDSLASSSKPEQMSVLTSGPKSSEDTGME
TEASATTSDSKKHEEDTEVKVVEKKPPKPAEESGKALKSPHSTSAERETDETRDRSLREK
VSERRSSTPKQASSSDSDSESSSSRSSSCPSQNKPSPPSKKKDEKENRREDIQEEKKAQS
SREVKQEALSEPAGQVAMELEGRSLSERAIQQSDHQGTETSNTRPEESSTVKSFAARKIS
LSSKTEIASSEAEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQELVVE
LHPDEGRLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGQENGQKDMEEEEDEEEQ
KWTKGETEKQRKQESSPDASMEIHDGESKKVTPSDSLVRRSISQQNSGVSITIDDPIRTG
RQLSPPRGKTSNIIHVHNLVRPFTLGQLKELLNRTGKLVEEGFWIDKIKSHCCVTYSTVE
EAVATREALHGVKWPTSNPKVLRVDFCEQDELDFHKGIVSSDRAVEGHDPHASGTSARPA
AHHPLPPANHEKEKERERERDGGALAVRDQWAERERAMERRERTRSEREWDRDKIKDFGK
EDRDRTRRSRSRERRRRERGKSKEKRTEKKDKPEEPPVKLLDDLFHKTKAAPCIYWLPLT
DEQATQRALERAERIKEREKRRKELQEEEDKKQEEQKERAKGRDREGGNAGVVRRSTEGE
RDRGKEREREGGREAEKRRDGHRGHGSDSKPVVGSRRSQSRSNTSRDRRH
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcgaggatgttacgttagacggcaaaccgcttcattcgctccgtgtggcg
gatttaaaaaccgccctggagcagagagggctcgccaaaagtggacagaaaaatgcactt
atcaaacggctgaaaggggctcttatgttggagaatctccaacgaacatctactcaaaac
attggtcttcagcccaactctcagattggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagctcctccgacagagactggagagagaagctcgagag
gccaccgaggcagatgagacacagagtcctgctggccctgagacggatgaacacacgaca
accaaagatggcacttcttttctgccagataaacatcacatcatacactctcatctgtct
gcaacccaatcgggtggtggagggttgccacaggaccctgggttaatgggatcacacagg
ttggatacaggccctgttccagtgtctcaagagtcagctgactccaaagctggaaggata
cggcatccttctttccctcctgggcacgaagaggtcgcaacaccctctcctccacgtgca
gtcgcctccttgtctgtgcgcgtggttggacaacctgagcgtcaaggcctgcctctcatg
atgccccgttctcaagagagagagggaacggccccggtcgaagcaggtcctgcccactca
gtgttgcagctcagccgttctgcgagggccgcagcttatgcacaagttgatagtgatgac
agtgatgaggatgatgatgacagtgatgataataatgagtggggtcctacctctcatgta
aaaaagagcatccggactcctcctgttcacactccaccagctgcagccccccaacgatcc
cgcagaaagcttcagccaccacagcacatccctccccagcctcaaccggtccaccagccg
cctctgcagctccgtcagcctactcctcccccatccccacctccagagctctctttccca
ctccccgacactcccaaacagagcccaaatgaccaagatgagccagcaggcctagcagaa
ggtgctgccccaggggcaggcgtggcctctcctccatccctcaacagacaggagtccagc
tccagttctagatccagcagcccagaaccacgcacacgcagacctggaccacttagcctg
ctggtccgcaaaatggaatctgaaggtgtgtttggcgcacagagggtagagctcgaggaa
gaaggagagatggaagttgaaaagcagcaagatggtgaagcagaagtgcaagactccgct
cagcagcttgtcgggccaggggtgtctgtgtcagcacccacaatgccccctgctcaacaa
gatgctcaagactctggactcttggagcagaggagaggtaagcaaaaaagtgaggaaagg
gagaaagtggatgagacctctgcaccattccatttgacgtcacccaccactctcccacct
agaagtccacacattttctcagaggttccaccacctgattcacttgcatcatcctccaaa
cctgagcagatgtcagtcctcacatcagggccgaagtcctctgaagatactggtatggag
acagaagcctctgcaacgacgtctgattcaaaaaaacacgaggaagacacagaagtgaaa
gttgtagagaaaaagccacctaaaccagcagaggaaagtggaaaggccctaaaatctcct
cactctacatctgcagaaagagaaacggatgaaacaagggaccgttcactgagagaaaaa
gttagtgaacgacgctcttcaacgccaaagcaggcatcatcatctgactctgattcagaa
tcatcatcctctcgttcttcaagctgtccttcacagaataaacccagcccacccagcaaa
aaaaaggacgaaaaagagaacagaagagaagatattcaagaagaaaaaaaggctcaatct
tcaagggaggtaaagcaggaagctctctctgagcctgcaggccaagttgcgatggaactg
gagggccgctctctttcagagcgcgctatacagcagtctgaccaccagggaacagagacc
agcaacacccgcccagaggagagctccaccgtaaaatcatttgctgcccgcaagatctcc
ctcagcagtaaaacagaaatagcgtcgtctgaggcagagccagtgggtggagccagcagg
aaaagaagatggggttctagtacagcagtcactgccaagaagccgtcaatcagcatcacc
actgaatcgctgaagactctaattccagacatcaagcccctacaggagttggtggtcgag
ctgcacccagatgaggggcgtctctctgtggatgaggactcatccgggcctcgtgagcga
gaggaaccagaggaggatcagggactcaagatcagacgcacagtgacacagattgttcca
tctgatggacaggagaatgggcagaaagacatggaggaggaggaggatgaagaagagcag
aagtggactaaaggagagacagaaaaacaaaggaaacaggagagctcccctgacgcttcc
atggaaatacatgacggcgagtccaagaaagtcactcccagtgattctttggttcgccgc
tccatcagtcagcagaactccggcgtgtccataactattgatgatcccatacggacgggt
cgccagctctctcctcctcgcggaaaaacttccaacatcatacacgtccacaatctggtg
cgacctttcaccttagggcagttgaaggagttgttaaatcggacaggtaaattggtggag
gagggtttctggattgataagatcaagtctcactgctgtgtcacatactccactgtagag
gaagctgtggccactcgagaagcactgcatggtgtgaaatggcctacaagtaatcccaaa
gtactacgtgtggatttttgcgagcaggatgagttggacttccataaaggtatcgtgtcc
agtgaccgtgcagttgaaggtcatgaccctcacgcctcaggaacttcagctcgccctgcc
gcccatcacccacttccacctgcaaatcacgaaaaagagaaggaacgagaaagagagcga
gacggaggagccttagctgtgagagaccagtgggcagagagggaaagagcgatggagagg
agagagaggacccgttctgagcgggagtgggaccgggataaaatcaaggacttcgggaag
gaagaccgagaccgaacgagaaggtcacgatcgcgagagcgaagacgcagagagagaggc
aagagcaaagagaagagaacagagaagaaggataaaccagaagagccacctgtaaagctt
cttgatgacctgttccacaaaactaaagcagctccctgtatatactggttacccctcaca
gatgaacaggcgacacaaagagctctagagcgtgctgagcgcataaaggagcgagagaag
aggaggaaggaactccaggaggaagaagacaaaaaacaagaagaacagaaagagcgagca
aaaggtcgcgatagagagggtggtaatgcaggtgttgtgagacgttcaactgagggagag
cgagacagagggaaggaaagagagagagaagggggcagagaggcagaaaagaggagagac
ggccacagaggccacggtagcgactccaaacctgtagtggggagcagacgctcacagagc
cgtagcaacacctccagagacagacgacactga
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