Carassius auratus (goldfish): 113052150
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Entry
113052150 CDS
T07313
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113052150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113052150
Spliceosome [BR:
caua03041
]
Complex A
Other components
Complex A specific factors
113052150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
113052150
NCBI-ProteinID:
XP_026072288
Ensembl:
ENSCARG00000062797
UniProt:
A0A6P6KJ38
LinkDB
All DBs
Position
32:complement(31654971..31665440)
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AA seq
663 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFESGPGAGLMAPPGPAVSFPLQNLQQPQLSNPGFSQFP
GAVSSALSNPVGVGLPSMAGNTDFGQKKRKRSRWSSETPDQKTIIPGMPTVIPAGLTRDQ
ERAYIVQLQIEDLTRKLRTGDLGIPVIPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEE
RHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIE
KECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ
GIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAGHI
SSDCKFTSSFAQRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNPPPSGPRP
SGPNNNQPPPNRPPWMNSGPTDNRNYHGMHQVPGGPHNFPPPMPNMGGHPMPPNPNGMPP
PWMQPPPPPMSQGPAPPGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQQTAASAAQPPPPMGNPSMVPPPPG
VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPYGMPPAPPPPP
PQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cgaggctttgaatcgggccccggcgcggggttaatggctccgcccgggcctgcggtgtct
ttcccgctgcagaacttacagcaaccgcagctatcaaacccaggcttctcccagttcccc
ggagccgtgagttctgcgctctcaaacccggtcggagtggggctaccgtctatggcgggg
aatacagattttggccagaagaagcgaaaaaggagtcgctggagcagcgaaacccctgat
cagaagaccattatcccgggcatgcccaccgtgatccctgctgggctgactcgggaccag
gaacgagcttatatagtccaactgcagatcgaagacctgacacgtaaactgcgtacagga
gacctgggaatccctgttatccctgaggacaggtctccatctcctgagcccatctacaac
agtgaggggaagaggcttaacacgcgtgaatatcggacacgcaagaaaatagaggaagag
agacattctcttattacagagatggtgggactgaacccagaattcaaaccccctgctgac
tacaaaccaccagctactcgggtcagtgataaggtgatgattcctcaggatgaatatcct
gagatcaactttgttgggcttttgattggcccacgtggcaacactctgaaaaacattgag
aaggagtgctgtgctaagatcatgattcgcggcaaaggctcagtaaaggaaggaaaggtt
ggccgtaaggatggacagatgcttccaggagaagatgaacctcttcatgcactggtcact
gctaacaccatggagaatgtcaagaaagctgtagagcagattcgtaatatcctcaagcag
ggcattgagacccctgaagaccagaacgatctgagaaagatgcagctgagggagctggca
cgactcaatggcactctgagagaggatgataacagaattttacgcccatggcagagcaca
gagcctcgcagcatcacaaacacaactgtctgtacaaagtgtggtggagcaggtcatatc
tcatccgactgcaagtttaccagttcctttgcacaacgacccggtgaaccaccccagtct
gctcaggataaggctagaatggataaagagtacttgtctctcatggcagagctaggagag
gctccagtcccttcctctggtgggggccacagcaatcctccccctagtggacctcgtcct
tcaggacccaacaacaaccagccgccgccaaatcgtcctccttggatgaattcaggccct
actgataacaggaattaccatggcatgcaccaggttcctggtggccctcacaacttccct
ccaccaatgccaaacatgggtggccatcctatgccaccaaaccccaatggaatgcctcca
ccctggatgcagccaccacctcctccaatgagccaaggcccagcaccacccggacacccc
atgggtttattgccaccacccatgggtatgatgcccccacctccacctccccccaacaac
caaccaccacctccaccctcaggacctctgccaccgtggcaacagcaggcacctccccca
ccacccaccagcagcatggcaaccagcgctccactgccatggcaacaaaatacaaccacc
acatccacccctgcaactggaaacctgccaccctggcaacagcctcagcagacggccgcc
tcagccgctcagccacctccacccatgggcaacccctctatggtgccgcctccacctggg
gtccagcccccactgcctcctggtgcgccccctcctccaccaccccctcctcctggctcg
gcaggcatgatgtatgcacctcctccccctcccccaccaatggaccctaactttgtgacc
atgatggggattcccggtatgccaccttacgggatgccccctgcgcctccaccccctccg
ccccagagttaa
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