KEGG   Carassius auratus (goldfish): 113052267
Entry
113052267         CDS       T07313                                 
Name
(RefSeq) focadhesin-like
  KO
K27498  focadhesin
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113052267
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     113052267
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 113052267
NCBI-ProteinID: XP_026072470
Ensembl: ENSCARG00000014867
UniProt: A0A6P6KJM8
LinkDB
Position
32:complement(33738079..33779072)
AA seq 1807 aa
MTEILKSRFEFPSSLIQAQAVRTLVTAVLKEKGQNERICQTTAKGQSLESLWEQCSSDST
VVRSACCDALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA
SFTCPYSIRTFPHPYITVLENRPDCWPALLQEIDDFLQLAMDKDEPVYVKMLVPFLRYLY
CEPQRLSENALLRHSLLRVLLQPRGVPEPDSLQEKGASGTRVVRELIQSLFDLLPYMLVD
SVTAVVEFSSFAESLTSALLIDPGFWRKELTQLTLQLLCACQLSLHLGGELMSLLHTLHQ
IIPAHAEELPPEQVIMGISLLLLSASTSQQTALLELAVKIVPPELPPPWGASLLVMPLLQ
VLSCSSLMEALTDTQTHTKNLELTNSLLQRVQREASDRREDSTQLSLPLSTWYSELQVAT
SVLHRISVDSIASMEWLYSLQSSLSVCEHVPDSVCLLVSHVIVSSHGDLCRLALDTAAAI
AEADPAKVPCFLPVLMFKLGRVSDPALSHSVLYTLPKLGTHKFCIPQVLHVLQTLGSSSR
LRPVALRLLALLWKKQDRVYPDLQRLMSQLEKSSVVLGKNTQWEQILARAACIRDICRER
PYQHGGDMLAAISDTLMQFSRKDQATPAALALQGLQELCRAEVVDIISTWKALSPKLCCD
TRPLVLKATAELLALVPTLNVKTEEYEKFRNEAVCVLWGYALSQDPEVASPGFKALSEYP
EPSHTILHLPEQIRPVPKQPEEEDEGKENENEKEEDVSVPGTSYVKLVRLTPRSVLPALE
TFLTALVRQEMNQMPRGVYHSALIGVNLRSDQGKTVSGIPSFMLKTYEKNKQPGLKPGLA
AGLLLCYDLPVQTDKDGHPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWR
GFMSRAYHAALKGRKAELEMLQKQGKESPEELQYKQHYAWLWVRDQLTDVVKSAAKDSPV
VQGNSILALSGLAVVLTRYESNLPTQSESGLEVGPDFLPTVHWLTMVIDTLLSIVSSNSN
PKAQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSCKKNIPAILGTLEAGLPG
SPSADESQALQFHSGLALGMFLAWLHDERVSDISGQSVAELLVKHLERLEDCCFNPNLEY
NAGCVLGVGLVLSSLSSSSQSERDGVHVSLTLDRLLQSLQDSSNMSRMQQEVLAYSVACV
AVSAFSAGIIEASKAEESMNTLRTLTEESQQTPGFALALGLTVFGLSSFGHGKAVDIQPR
LLAAWTKILLAEGCPTMQRLSALNGLIALVGSEMALIQMKSESEESSQQQSRLNEVIRAI
TQIITFSGTIGLQSNGACLLGHLHLAHMSSSHSRTAVPQDFGYLPEKSVIRASVDFITEA
GRKGPEFTPPHLVKTVLAALVTVGGSFQYPPVNWSAILSPLMRLGFGEEVQHHCLALAAS
QAQSSQSAALFLGIWLVPPLVHSLSMHSRASLYECLNSWMKHVAEDKLQVYVDSLAIQQF
VPDTRPQRLPLCLSILRGLSKAMAVPNPPQNCWTALCSTTEKIYNLLPDNIPAGEVHLYE
AMCSCLSELSDTEIDRILKVTEANVEKTAFILCYLTSKGRVPLLGLNDVISTILQVGNKK
RISWLLLQALHQSRFASSPSTGVSKRMEWLLELMGHIRNVAYGSPSVKCVSVIEGTDFLL
GVFAAAVVSWADHCAPLLIGIRAQWFPWEQSSLTTDLSHDLCVNPAITELSVASCLLAIP
CSMKKLLCKEPWKSQSQKFIDWLFSITEGPKLGFSETALLTAKATLMALRSSSEFKKKGV
WTRAYGW
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgactgaaattttgaagagcaggttcgagttccccagctccctcattcaagcccaggct
gtgaggacactggtcactgcggtgctgaaagagaaaggccagaatgaaaggatttgtcag
acaaccgctaaaggtcaatcgctggagtctctgtgggagcagtgcagcagtgacagtact
gtcgtccgctcggcctgctgtgacgctctggtgctgcttgtagaacagggacatgcagat
ctgccatatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg
ctgatcaaagtggttgggaggctgctacagatccaggcaagtcagcgggataacggagca
agcttcacctgtccatactcaattaggaccttccctcacccctacattacagtgctggaa
aaccgccctgactgctggcctgctctgctccaggaaattgatgacttccttcagctggct
atggacaaagatgagccagtatatgtgaaaatgctggttccgttccttcgttacctgtac
tgcgagccccagaggttgtcagaaaacgctctgcttcgacacagcctcctcagggtcctg
ctccaacctcgaggggttcctgagcctgacagcctgcaggaaaagggggcgtctggcact
cgggtggtccgtgagctaatacagagtctctttgacctgcttccatacatgctggtggac
agtgttaccgcagtggttgagttcagctcatttgctgaatctctgacatcggctctgctc
atcgatccaggcttctggaggaaggaactgactcagctgacacttcagctcctgtgtgcc
tgtcagctgagtcttcatctgggaggagaactgatgtctctccttcacacactccaccag
ataatacctgcacatgcagaggaactcccgcctgagcaagtgatcatgggaatctccctg
ctactgctaagtgcctccacctctcaacaaactgccctcctagagctcgctgtaaagatt
gtccctcctgagcttccacctccttggggtgcatctttgctggtgatgcccttgttacag
gtgctgtcctgctccagcctcatggaagccctgacagacacacagacacacacaaagaac
cttgaactgaccaattcactgttgcaaagggttcaaagagaggcctcagatcgaagagag
gactccacacagctgagtttgcctctcagcacttggtacagcgagcttcaagtggccacc
agcgtcctgcaccgaatttccgtagactccattgcatccatggaatggctttactccctg
cagtcatcactctctgtctgtgaacacgtcccagatagtgtttgtctcctggtgtcccat
gttatcgtcagcagtcacggggatctctgcaggttagcgctggacactgctgctgccatc
gccgaggctgaccctgctaaggtgccatgtttcctccccgtcctgatgtttaaactgggc
agagtctctgatccggctttgtctcactctgttctctacactctgccaaaactgggaacc
cacaagttctgtatcccgcaggtgcttcatgtcctccaaactctgggcagttcatccaga
ctgaggcctgtggcgctgcgcctcttagctcttttatggaaaaaacaggaccgtgtgtat
ccggacctgcagagactgatgtcacagcttgaaaaatcatcagtggtcttgggaaaaaat
acgcagtgggagcagatattggctagagcagcctgcatcagagacatctgcagagagagg
ccgtaccaacatggaggagacatgctggctgccatcagcgacacactgatgcagttctcc
aggaaggaccaggccacccctgctgctctggcactgcagggcttacaggagctctgtaga
gctgaggtagtggatatcatctccacatggaaagccctctctcctaagctgtgctgtgac
accagacccctggtcctaaaggccacagctgaacttctggcattagtacctactttaaac
gtcaaaactgaagaatatgagaagttcagaaacgaggcagtctgtgttttatggggctac
gcacttagtcaggacccagaggttgcaagcccgggttttaaagctctctcggagtaccct
gaaccgtctcacaccatcctacacttgccagagcagatcagacctgtaccaaagcagcct
gaagaagaggatgaagggaaggagaatgagaacgagaaggaggaagatgtttcagtgcca
gggacgtcatacgtgaagctagttcgtctcacaccacgatctgttttaccagcccttgag
accttcctaacggctctagtacggcaggagatgaaccaaatgccccgtggcgtgtaccat
tcagctctgattggggtgaatttgcgctctgaccagggaaaaactgtatctggaattcct
tcttttatgctgaaaacatatgagaagaacaagcagcccggtctgaaacctggcttagca
gctgggcttctactctgttatgaccttcctgttcaaactgacaaagatggacatccaatc
acacgatttcttgtcagcagagggcggagttatcaacaaatgttagccacccttattcat
gaggtgaacatccagccgtctgaatggcatcgttctctgctcttgccccaggcctggcgg
ggcttcatgagccgggcttaccatgcagctctcaagggtcgaaaggcagagctggagatg
cttcagaagcagggtaaagagagcccagaggaactgcagtacaaacagcactatgcctgg
ctctgggtcagagaccaactgacggatgtggtcaaatctgccgccaaagatagtccagtt
gttcaaggtaattctatcctggcactaagtggcctggctgttgttttaaccagatatgag
agcaacctccctacacagtctgaaagtggacttgaggtgggtccggacttccttcccaca
gttcactggctgacgatggtgattgacacactgctcagcattgttagcagtaacagtaac
cctaaagcacaagtcttcccatggttcattcatcgctcatactcgggtgagaacacagcg
agtgtgatcgcgcgctcctgtgctgctctggggctggcgttgttggtgccggtgctggtg
acctcgtgcaaaaagaacattcctgctatactgggcaccctagaggcgggactgccaggc
tcgccctccgcagacgagtctcaggcactccagtttcacagcggcctggctctgggcatg
tttctagcctggctgcatgacgagagagtcagtgatatatctgggcagtcggtagcagag
ctgctagtgaaacatctggaacgactggaagactgttgctttaatcccaatctggagtac
aatgctggttgtgtgttaggtgtggggttggtactcagttctctcagtagcagtagtcag
tctgagcgggacggtgtgcatgtgtctctaacgctggacagactcctgcagagcctgcag
gacagcagcaatatgagccgcatgcagcaggaggttttggcctattctgtggcgtgtgtt
gcagtttcagcatttagtgcaggcattattgaggccagcaaggctgaggaaagcatgaac
acactgcgcactctaacagaggaaagccaacagacaccaggctttgctttggcattgggt
ctcacagtgtttggactctcttcttttggtcatggtaaagcggtagacatccagcctcgt
ctgctggctgcctggaccaagatactgctggcagagggttgtcccacaatgcagaggctg
tctgccctcaatggactgatcgcattagtgggatcagagatggctctcattcagatgaag
agtgaatctgaggagtcctcacagcagcagagcagactgaacgaggtcatccgagccatt
acacagatcatcactttttcaggaacaataggtctgcagtctaacggagcatgtctgctt
ggacacctgcatctggcccacatgtccagcagccacagtcgaaccgcagttcctcaggac
tttggttatctcccagagaaaagtgtcatccgagcttcagtagacttcatcaccgaagcg
ggaagaaaaggacctgagttcactcctccacacctggtgaagacggtgctggcagcgtta
gtgacggtcggtggaagcttccagtatcctccagtcaactggagcgccatcctctctccg
ctgatgagactcggctttggagaggaagtgcagcatcactgtttagcgttagctgccagt
caggcccagtcttcccagagtgccgcacttttcctcggcatctggcttgtgcctcccctg
gttcacagtctgagtatgcactccagggcttctctgtacgagtgcctgaactcctggatg
aagcacgtggctgaagacaaactccaggtgtacgtggacagtctggcaatccagcagttt
gtgcctgacacacgtcctcagcgcctgcccctgtgcctgtccatcctgcgtgggctgtcc
aaagccatggcggtccccaacccgccccaaaactgctggactgccctgtgctccaccact
gaaaagatctacaacctcttacctgataatatccctgctggtgaggtgcacctgtatgaa
gccatgtgttcgtgtctgtctgaactgagcgacactgagattgaccgcatacttaaagta
actgaggctaatgtggaaaaaacagctttcatcctctgctacctgacctctaaaggcaga
gtccctctgctcggactcaatgatgtcatcagtaccatcctccaggtggggaataagaaa
cgaatcagctggcttctcctgcaggccctccaccaatcacgcttcgcctctagtcccagt
acaggggtctctaaacgaatggagtggcttttggagttaatggggcacatcagaaatgtt
gcatacggatctccttctgttaaatgtgtcagtgttatagagggaacagacttcctcctc
ggtgtgtttgctgcagcagtggtgtcttgggctgatcattgtgctccgcttctcattgga
atcagggcccagtggtttccctgggaacagtcctctctgacaacagacctgtcccatgac
ctctgtgtcaaccctgctatcacagagctgtcggtcgcgtcatgccttcttgcaatccca
tgcagcatgaaaaaactactctgcaaagagccgtggaaatcccagtcacagaagttcatc
gactggctcttcagtattacagaaggtcctaaactaggtttctctgagactgccttactt
acagccaaagcgactctaatggctctgagatccagctctgagttcaagaagaagggtgtg
tggaccagggcgtatggttggtga

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