Carassius auratus (goldfish): 113052694
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Entry
113052694 CDS
T07313
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113052694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113052694
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113052694
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113052694
RAVE complex
113052694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_CAF1B_HIR1
CENP-B_dimeris
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
113052694
NCBI-ProteinID:
XP_026072883
UniProt:
A0A6P6KKT0
LinkDB
All DBs
Position
33:1812146..1839787
Genome browser
AA seq
2916 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVSNQPFTAYASGCDIVILGSDFERIQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGNIVCVFEPVEVSPQGKAQKKLSYHWQKSGQFVLQSVAHILTWH
PTGSWLLTGSACLQMWCDVQSSAETEEEAESAGPLHSWRCVWQCKSAAPTHFIKFSPDGE
FFATAGQDDCLVKVWYSTSKWQADVSKLFTPLDLRSGAEINFSFIYLAHPRSVTGFSWRK
TSKHMPRGTVCNMLLTCCKDSVCRLWAETLLPSDCLLSGVGHNHNMKANNMKKSSSSTGV
QKQSPLELKLKPSWREEVRCLSQLSYSGPLPQQQNKHYSHRTNILHANALCHFHIAASIN
PATDIPLLPSISSMNGSDEEEPGGPFTVHWLNNKELHLTLSMEVFLQQLRSSGEQNGHTE
RYDADEEGSGADADAVSLPAAAVDHQLDVLLSDWNREADMLFSIHPMDGSLLVWHVDWLD
EYQPGMFRQAQVSFVSRIPVAFPTGDAISLSRSVVMYACNRNVELAMQHGRQRPAVLPHS
SSSALIGLSQNKPSSSSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHK
SRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPDGDALTRPAAAPSRRSRASSGGVAQD
PNAIYSELILWRVDPVGPLSFSGGVSELARINSLHTSAFSNVAWLPTLIPSSCLGVYGNS
PSACFIASDGHSLRLYQAIIEAKKLLSELSNPNISKYVGEVFNIISQQSTARPGCIIELD
AITDFQGKETQLLHVFEEDLILGNEKIDDYLQDSVPSRTLFSARFFLVVVEVTQSGRSLL
HMWHLQLDAVPVVMDQTQTPERETLSPSPVNGSQFNFETDGSPQTPRAKLNTSNLQSACR
LALSSTKVFSQELDLPQGVEVMRVSPAAGHLSASSLQPAGRSPYLLATSCSDGSVRFWRC
SSVSDPEGSADPSYVWEEWPLLVEEGEVSSSALSVCGQLMALSCCHTSRVAVAHRSHLHI
MHISIFQCDSTGGSQWILEQTLKVCSSDSPSENHCLSNGCSAVGSKSQVHLDWVSREDGS
HILTVGLGSKLYMYGMLSGKPPDLGLSDCSKESICSRLVLLRVVDLVSSVEGSPPIPVSL
SWVRDGILVVGMDCEMHVYSQWQPPAPVKPSRTGSVTSLNSVVKQEALGLNPSRKTLTRS
MTSLAQKLSGKRTVYDLPAEMEDSGLFEAAYNLFPTLPQYHPVQLLELMDLGKVRRAKAI
LSHLVKCIAGEIVSMKDTTINQERRLRSLTISASGCTSRDPKMFSKAESSDYTEIDSIPP
LPLHALLAADEETAPSAKERSESVSAHGQSDTYEELFQTSGVSTDDMDPFDGDEEDANAK
VIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMALADTIASTSTDFGESQGK
GQGGETLDECGLKFLLAVRLHTFLLTSLPPAHRAPLLCQGLSTCHYAWAFHSEAEEELLN
MLPVLQKGEPTWPELRAMGVGWWLRSTNKLRRCIEKVAKAAYQRNNDPLDAALFYLAMKK
KAVVWGLYRSHHNVKMTAFFSNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLK
DAVEVCIEKMQDLQLALVVCRLYESEFETSCTYKRILQRNVLGQQQQIAAHQDPFLRSMA
YWVLDDYSRALDTLLEPNADSSREGSGRSSPYSPDVFNFYTYLRTHPLLLRRHLGSCDKA
KVGLTAEGRAVDSISLTERRLFFTAAYAHLQAGCPMLALEVLSKMPKVVKRSQVRENSPV
SSSEHKDQASASWPVLNGLESVSSLSSPREDSRSESVLSFDWSHPSVTLQDEPLELKWDS
DKDDTDEEESGLAMKTIRPEKDSSVSRDGPVVTSTPMGHSTDETPAMTDDILAAQLKFSS
CLKILTTELRTLSTGYELDGGKLRHQLCHWLERAVAALQRCCGYNPFLQHLPEGISADLS
QVEDLEERGAAEQARELQQRRRLWLKRNQPLLRIFLSYCSLHGSHGAGLASVRMELILLL
QESQQDDSLQISSPAPQHLSAPLFLAWTAISKTVVANPIVHLTNLTHDILHTINALDAPP
HPDVVSNEIYVMHTLAASLSACIYQCLCDGHSYSHVNPFTGITYESVLLTHQPPVRSVSI
EETVLPNTSPAQWPGVSVLLRLLSASGDENQPGLPVLLCEILTAVFLSLFVHGLATHSSH
ELFRIVAHPLNSKLWVAVFGGGARVPVLEKPSSLTDVERKQRRSRLSSSRSNSREVPDSP
VSPRPVVMEPDSSVCKERFVPPELSIWDYFIAKPYLPPSASRVEYDSEESQGSEDEEDED
EEDEDEGDPNSPLAEHSNNSSYSWCLMRLAMVQIVLFNLKTFYPMAGHDLLDLPVCSPLC
HAALRTLQRWEQLLLKRLEIFGGPPSRFICSQLLEESVSSGPALLRHKALFEPSNTPFRS
RRRAALPVRRLWQYLVKQEEVQEMFIRNIFTKKRDQNQETERVKCSVPLESTHNQIEANQ
GFPGGKARIIHKESDIITAFAINKANRNCLVIASTHDIQELDVSSILSTQILTWVDDENE
AEVKGTDDFLVVHARDDFSALHGSTPYTHSSPGTPINMPWLGSLQTGRGAAVLIKRNINN
VRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSPGNSRVTRIRFSYQGNKFGIVD
ADGALSLWQTSTSGNAPKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTL
VTPAYSLVHGFSCHESGSTVLALASKQQLLLSGGRRGYISVLDLSLKIQRQCFQAHDSPV
KALAVDASESCFISGSAEGNIKVWSMSTQSLLHTFSNEHARQSLFRNLGTGVMQIETGPT
NHIFSCGADGTMKLRLLPDALSLYCSGVKNDVRFLI
NT seq
8751 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacaggagccgtaaaccccggagacaactgcttctctgtg
ggcagcgtcagcaaccagcccttcacggcgtacgcctctggctgtgacatcgtcattttg
gggagtgactttgagaggatccaaatcatcccaggagccaaacacgggaacatccaggtg
ggctgtgtggactgttcactgcagggcggacagatcgcagcgtcgtacggaaacattgtg
tgtgtgtttgagccggtggaggtcagtccacaagggaaagcacaaaaaaagctgagttat
cattggcagaagagcggtcagtttgttctgcagtcggtggcacacatcctgacgtggcac
cctacaggctcatggcttctgacgggctcggcgtgtctgcagatgtggtgtgatgttcag
tccagcgcagagaccgaagaggaggccgaatccgccggtcctctgcactcctggagatgt
gtctggcagtgcaagtctgctgctccgactcacttcatcaagttttccccagatggagag
ttttttgcgaccgcgggacaggacgactgtctggtgaaggtgtggtacagcaccagtaaa
tggcaagcggatgtctccaaactcttcacgccgctcgacctgcgctccggagcagagatc
aacttctccttcatttatctggctcaccctcgctccgtcaccggcttctcctggaggaag
accagcaaacacatgcccagaggcaccgtgtgtaacatgctgctgacctgctgtaaggac
agtgtgtgtcgtctgtgggccgaaacactgctgcccagcgactgtctgctgtctggagta
ggacacaatcacaacatgaaggcaaacaacatgaagaagtcgtccagcagcaccggagtg
cagaagcagagcccgctggagctgaagctgaagccgtcgtggagagaggaggtgcgctgt
ttgtctcagctctcatacagcggtcctctgccgcagcagcagaacaaacactacagccac
cgcaccaacatcctgcacgccaacgcactgtgccacttccacatcgccgccagcatcaac
ccagccacagacatccctctgctgccctccatctcgtccatgaacggctctgatgaggag
gaaccgggcggcccgttcaccgtccactggctcaacaacaaagagctgcacctgacgctg
agcatggaggtgtttctacagcagctgaggagcagcggcgagcagaacggacacaccgag
cgctacgatgctgatgaggaggggagcggtgctgatgctgatgctgtctctctccctgcg
gcggctgtggatcatcagctggacgtgctgctgagtgactggaacagagaagcagacatg
ctgttcagcatccacccgatggacggctcgctgctggtgtggcacgtcgactggctggac
gaataccagcccggcatgttccgacaggcacaggtttccttcgtgtccaggattcccgtg
gccttccccaccggcgacgccatctcgctcagccgcagcgtggtcatgtacgcctgcaac
agaaacgtggagctggccatgcagcacggccgtcagcgccccgcggtcctgccgcactcg
tcctcctccgctctgatcggactgagccagaacaaaccgtcctccagcagcctgcgtctc
agcatcttcacccccagcgtcctgatgatctccaaacacgccgacggctcgctcaaccag
tgggccgtcagcttcgccgaggactccgccttctccacggtgctcagtgtgtctcataag
tcacgctactgtggccaccgcttccacctcaacgatctggcctgccactctctgctgccg
ctgctgctgaccacctcgcaccacaacgccctgaggacgcccgacggagacgctctgacc
cgtcccgccgctgccccgtcccgcaggagcagagcctcatccggaggagtcgcccaggat
cccaacgccatctacagcgagctgatcctgtggcgtgtggatccggtgggaccgctgtcg
ttctctgggggcgtgtctgagctggccaggatcaactctctgcacacatcagccttctct
aacgtggcctggctgcccacgctcatccccagcagctgcctcggtgtgtatgggaactca
cccagtgcctgcttcatcgccagtgatggacactcgctccgactctatcaggccatcatc
gaggccaagaaactgctgagtgaactctccaaccccaacatctccaaatatgttggagag
gtgtttaacatcatcagccagcagtcgacggccagaccaggctgcatcattgagctcgac
gccatcacagactttcaggggaaagagacgcagctgctgcatgtgtttgaggaagacctg
atcttgggaaatgagaagatagacgattacctgcaggattctgttcccagccggacgctg
ttctccgctcgcttcttcctggtggtggtggaggtcactcagagcgggaggtcactcctg
cacatgtggcacctgcagctggacgccgttcccgtcgttatggatcaaactcaaactcca
gagagagagactctgtctccgtcccccgtgaacggctcacagtttaactttgagacggac
ggatcccctcaaaccccgagagccaagctgaacacgtctaacctccagagcgcctgccgg
ctcgccctgagcagtaccaaagtcttcagccaggagctggatctgccgcagggcgttgaa
gtcatgcgtgtgtcacctgctgcaggtcatttgagtgcttcatctctgcagccggccgga
cgctctccgtatctgctggccacgtcctgctcggacggatccgtccggttctggaggtgc
agctcggtctctgaccccgagggctctgctgacccgtcgtacgtctgggaggagtggcct
ctgctggtggaggagggtgaggtcagcagcagtgctctgagtgtgtgcggtcagctcatg
gctctcagctgctgtcacaccagcagagtcgcagtcgctcaccgcagccacctgcacatc
atgcacatcagcatcttccagtgcgactccaccggaggatcccagtggatcctggagcag
acgcttaaagtctgtagctccgacagcccgagtgagaaccactgtttgagtaacggctgt
tcagctgtgggcagtaagagccaggtccacttagactgggtgtccagagaagatggctct
catatattaaccgtgggtctgggatccaagctttacatgtacgggatgctttccggaaaa
cctccagatctgggattgtccgattgcagtaaggagagcatctgctctcgactggtgctc
ctccgagtggtggatctggtgtcttcggttgagggttcgccacccatccccgtctctctg
tcttgggtgcgagatggcatcttagtagtcgggatggattgtgagatgcacgtctactcc
cagtggcagccgccggctccggtcaaaccgtctcgcaccggaagcgtgacgtcgctgaac
tctgtggtgaagcaggaggcactcggtctgaatccttctagaaagaccctcaccagatcc
atgactagtttggcacagaaactcagtggaaagagaaccgtgtacgacctcccggccgag
atggaggattctgggttgtttgaggcggcgtataacctgtttcctactttgcctcagtat
catccggtgcagctgttggagctcatggacctcgggaaggtgcgccgggccaaagccatc
ctgtcgcatctggtgaagtgcattgctggggagatcgtgtctatgaaggacactacgatt
aaccaggagcggcgtctgcgctcgctcaccatcagcgccagcggatgcacctccagagac
cccaagatgttcagcaaagctgagagctctgactacaccgagatcgactccatccctccg
ctgccgctgcatgcgctgctagccgctgacgaggagacggctcctagtgccaaagaacga
tcagagagcgtgagcgctcacggccaaagcgacacttatgaagagctcttccagacctcc
ggagtctctacagatgacatggaccctttcgatggagatgaggaggatgctaacgctaaa
gtcattgatctgtcaaagtacagccctacgttcttcggctctgaacacgcacaggtgtta
tctggacacctgcttcactccagcctgcccggcctgacccggatggagcagatgtctctg
atggctctggcggacaccatcgcttccaccagcaccgacttcggagaaagccaagggaaa
ggccaaggtggagagacgctggatgaatgtggactcaagtttcttctggccgtacgtctg
cacaccttcctcctgacgtctctgcctccggctcaccgcgctccgctcctctgtcaagga
ctgtccacctgccactacgcctgggcgttccactccgaggccgaggaggagctgctcaac
atgcttccggtcctgcagaaaggagagcccacgtggccggagctgagagccatgggtgtg
ggctggtggctgaggagcaccaacaagcttcgcagatgcattgagaaggtcgcaaaagct
gcttatcagagaaacaacgacccgttagacgcagccttgttttatctggccatgaagaag
aaagctgtggtctggggactctacaggtcccatcataacgtgaagatgacggcgttcttc
agcaataacttcagtgaagaccgctggaggaaggcagcgctgaagaacgctttctctctg
ctcggaaagcaacgtttccagcattctgccgctttctttctgctggccggatccctgaaa
gatgctgttgaggtttgtatagagaagatgcaggaccttcagctggctctggtggtgtgt
cggctgtacgagtctgagtttgagacgtcctgcacctacaagcgaatccttcagaggaat
gtgttgggtcagcagcagcagatcgcggcccatcaggaccctttcttacgcagcatggcg
tactgggtgttagatgactacagcagggctttggacacactgctcgagcccaacgcagac
tcgtcacgtgaaggcagtggaagatcatctccctatagtcctgatgtttttaacttctac
acctacctccgcacacacccgctgctcctgcgccgtcacttgggctcctgtgataaagct
aaagtgggtctgaccgctgaaggccgcgccgtcgactccatcagtctcacggagaggcgg
ctgttcttcaccgctgcgtatgcacacttacaggccggctgccccatgctggctctagag
gtgctctctaaaatgccaaaggtcgtgaagcgctctcaggtgcgagagaattcgcccgtg
tcgtcgagcgagcacaaagaccaggcctcggcttcgtggccggttctcaacggcttggag
tcggtgtcctcgctctcgtctcctagagaggacagtcggtcagaatcggtgctcagtttc
gactggagccatccgtctgtcaccctgcaggacgagcctctggagctcaagtgggacagc
gataaagacgacacggacgaggaagagtcaggcctggcgatgaagaccatccgtccggag
aaagacagcagtgtttctcgagacggtccggtggtcacgtccaccccgatgggtcacagc
acagacgagacacccgcgatgaccgatgacatcctcgccgcgcagctgaagttcagctcc
tgcctgaagatcctcaccacggagctgcggacgctgtccacgggatacgagctggacgga
gggaagctgcggcatcagctgtgtcactggctggagcgagccgtggcggcgctgcagaga
tgctgcggatacaaccccttcctccagcacctgcccgagggcatctcggctgacctgagc
caggtggaggatctggaggagcggggcgcggcggagcaggccagagagctgcagcagcgg
cgcagactgtggctgaagaggaaccagccgctcctgcgcatcttcctgagttactgcagc
ctgcacggctctcacggagcaggactggcctccgtcaggatggagctcattctgctgctg
caggagtcccagcaggacgacagtctgcagatctcctctcccgctccgcagcatctgtct
gctcctctcttcctggcgtggaccgccatctccaaaacagtggtggccaatcccatagtg
cacctgaccaacctcacgcacgacatactgcacaccatcaacgctctggacgctcctccg
cacccagatgtggtcagcaacgagatctatgtgatgcatactctcgccgcttccctgtcg
gcctgcatctaccagtgtctctgtgacggacacagctacagccatgtgaatccgttcacg
ggaatcacctacgagagcgtcctgctgacccatcagcccccggtgaggagcgtcagcatc
gaggagaccgtgctgcccaacacctctcctgcgcagtggccaggtgtgagcgtcctgctg
cgtctgctgagtgcgtctggagacgagaaccagcccggtctgcctgtgcttctgtgtgag
atcctgaccgcagtcttcctcagcctcttcgtccacggtctggccactcactccagccac
gaactcttccgcatcgtggctcacccgctcaacagcaagctgtgggtggccgtgttcggc
ggaggcgctcgtgttcctgtgctggagaaacccagctcactcacagatgtggagcggaag
cagcggcgttcccggctcagctcatcacgcagtaactccagagaggttcccgacagtccg
gtcagtcccagacccgtggtgatggagccggactcttccgtctgtaaagagcgtttcgtg
ccgcctgagctcagcatctgggattatttcatcgcaaagccgtacctgcctccgtctgcc
agccgagtggagtacgactccgaggagagccagggcagtgaggacgaggaggacgaggat
gaggaggatgaggatgaaggagatcccaactctccgctggcagagcattccaacaacagc
tcgtacagctggtgtctgatgcgcttggccatggtgcagatagtcctgttcaacctcaag
accttctacccgatggcaggtcacgacctcttagatctgcccgtgtgctctccgctgtgt
cacgccgctctcaggacgctccagcgctgggagcagctgctgctgaagaggctggagatc
ttcggaggtcctccgtcgaggttcatctgctcacagctgctggaggagagtgtgtcgtcc
ggtccagcgctgctgcgacacaaagctctgttcgagccctccaacacacccttcagatct
cgccggcgcgccgcacttcctgtcagacgcctgtggcagtatctggtcaaacaggaagag
gttcaggagatgttcatacgcaacatcttcaccaagaaacgcgatcagaaccaggagact
gagcgtgtcaaatgttctgtgccgctggagtccacacacaaccagatcgaggccaatcag
gggtttcctggaggaaaggctcgcatcatccacaaggagtctgacatcatcacggcgttc
gccatcaataaggccaaccgcaactgtttagtgatcgcctccacccacgacatccaggag
ctggacgtgtcctccatcctctccacgcagatcctgacctgggtcgatgacgagaacgag
gccgaggtcaaagggacggatgatttcctggtggttcacgctcgggatgacttcagcgcg
ctccacggcagcacaccctacacccacagcagccccgggacgcccatcaacatgccctgg
ctgggcagcctgcagacgggacgaggagccgctgtgctcatcaaacgcaacatcaacaac
gtgaggaggatgacgtcacaccccacgctgccctactatctgaccggagctcaggacggc
agcgtgcggatgtttgagtggggtcactctcagcagatcacctgcttcaggagccccggg
aactccagggtcaccaggatacgcttcagttatcagggcaacaagtttgggatcgtggat
gcagacggagcgctcagtctctggcagaccagcacctcaggaaacgctcccaaaccctat
ctgacgcttcagtgtcacaataagacggcgaatgactttgtgtttgtgggctcatcatct
ctcatcgccaccgcaggcctgtccacagacaacaggaacgtgtgtctgtgggataccctg
gtcacgccagcatacagtctggtacacggcttcagctgtcacgagtctggctccacggtt
ctggctctggcgtccaaacagcagctgctgctcagcggaggccggaggggctacatcagc
gtcctggacctcagtctgaagatccagcgccagtgtttccaggcacacgactcgcccgtc
aaagctctggccgtcgacgccagcgagagctgcttcatcagcggatcggccgagggcaac
atcaaggtgtggagcatgtccacccagagcctcctgcacaccttcagtaatgaacacgct
cgtcagtcgctcttccgtaatctgggcacaggtgtcatgcagatcgagaccggcccgacc
aatcacatcttctcctgcggcgcagacggcacaatgaagctccgcctcctgcctgacgct
ctgagcctctactgcagcggtgtgaagaacgacgtcaggttcctcatctag
DBGET
integrated database retrieval system
