KEGG   Carassius auratus (goldfish): 113052868
Entry
113052868         CDS       T07313                                 
Name
(RefSeq) integrin alpha-4-like
  KO
K06483  integrin alpha 4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04514  Cell adhesion molecules
caua04672  Intestinal immune network for IgA production
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113052868
   04514 Cell adhesion molecules
    113052868
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113052868
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113052868
   04810 Regulation of actin cytoskeleton
    113052868
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113052868
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113052868
   04515 Cell adhesion molecules [BR:caua04515]
    113052868
   04090 CD molecules [BR:caua04090]
    113052868
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113052868
  Exosomal proteins of other cancer cells
   113052868
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin alpha subunits
   113052868
CD molecules [BR:caua04090]
 Proteins
  113052868
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 FG-GAP_3 Integrin_A_Ig_3
Other DBs
NCBI-GeneID: 113052868
NCBI-ProteinID: XP_026073089
Ensembl: ENSCARG00000023759
UniProt: A0A6P6KLB4
LinkDB
Position
34:113272..137580
AA seq 1028 aa
MCGVMTDNEMISSLPSRHLLKWTSAVGILWYLLILCDCYNLDVERPLVFHGPNGSFFGYS
VLLHQHAEDTWLMVGAPVADSSFYPKTKNPGAIYNCSVWSSQCEQLPVGDVQKCGRHCLA
ENDNQWLGVSLSRQPSQGHVLACGHRWKNIYYSSKDNQNKLPHGVCFRLSPDLKQANHII
PCYKDHQRKFGDGYGSCQAGLSNLLTEDLMVMGAPGTSYWTGSVLVYNTTSNISAAYVDD
DNEVLYGSYLGYAVSAGHFLDPQNTEIVGGAPQHEQTGKAYIFRIEGNTLKIVAKTKGKK
LGSYYGASVCAVDLNADGLSDLLVGAPMFSSVREEGRVHVYINQGEAEMKEADFELVGSD
SYAARFGETIVNLGDIDDDGYPDVAIAAPQENDLRGAIYIYNGRSSGIARSFSQRITGSL
LGNNFRMFGQSVSGGVDIDSNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMLLPESLNRS
IAQCTENGLPAVCVNVMVCFRVRGKQIPGNIELKYNITADVHHKDGFPSRFYFNGNGTSN
VTAGRVKVKHEQLTCATHQAFMKKDIRDIFTPIHFEVKYELGEHRVLQRDSGGLPSLKPI
LQQKDEQANVVKNKTTFARYCSWENCSTNLQVSAHLALPQSYRNMPYFALGNGKSIMLNT
TLVNIGDDAFLPKLYLRFPSNLHFIKVLEEDKYISCEIAEENKVAIGLDCNVGNLHIPPF
AKINITFLLDVMQNSSGGNLSININATSENFENKDLQHDNVVVLTLPLRYAVDLNVHAFV
SPTSFLIGEQESVPVDCYPEKFNYTYKMINMGPSKALDARVKIGLPLMLVPYKYQLISIT
DLQTTLGHCFQRNNTVPIIDDCDIPEPSFIQELVFFFSPKSKRIMFCGPEDKTCRMVECH
FGDLEVGKEVAITMEVELNPRVLQMSPGRHAVMMIQGMIDLISPVKDANTILLKDDVFAT
VLLEALYSNKPVMAVQIFLIVSSLIVGLIILALLVLTLWKLGFFERKLKKEKLNRDSWDY
VPKKESVS
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgtgtggtgttatgactgataacgagatgatttcatcactaccctccagacatctgctg
aagtggacatctgcagttggaatactgtggtacctgttgattctgtgtgattgttacaat
ctggatgtggagcgtcctttagtttttcatggacccaatggatcatttttcggatattcg
gttctgcttcatcagcatgctgaggacacatggctgatggttggagcgcctgtggccgat
tccagcttttatcctaaaaccaaaaatcctggagccatctacaactgcagtgtgtggagc
tcccaatgtgagcagctgcctgttggagatgtacagaaatgtggaagacactgtctggca
gagaatgataaccagtggctgggtgtgagtctgtcccggcagccttcacagggccatgtt
ttggcttgcggacatcggtggaagaatatctactactctagtaaagacaatcagaacaag
ctgccacatggtgtttgcttcagactcagcccagatttgaaacaagccaatcatattatt
ccttgctataaagatcatcaaaggaagtttggtgatggttatgggtcgtgtcaagcagga
ttatcaaatttattaacagaggacctgatggtcatgggtgctcctggtacctcatactgg
accggatctgttctcgtctacaacaccacaagcaacatttcagctgcttatgtggatgat
gacaatgaagttctctatggcagctatttaggttatgcagttagtgctggacactttcta
gaccctcaaaacactgagatagtgggtggtgctccccagcatgaacagactggtaaagct
tacatattcaggattgagggcaacactttgaaaattgttgccaaaaccaagggcaagaag
ctcggctcttattatggagctagtgtgtgtgcggttgacctgaatgcagacgggctgtct
gatctgctggttggggcgcctatgttcagctcagtgagggaggaaggacgtgtacatgtc
tacataaaccagggagaggctgaaatgaaagaggcagactttgagttagttgggagtgac
tcctatgcagcacgttttggagaaaccattgtgaaccttggcgatattgatgacgacgga
tatccagatgtggccattgcagcccctcaggagaacgatctgcgaggtgctatatatatc
tacaatgggaggagcagtggtattgcacggagtttctctcaaagaataacaggctctttg
ttgggcaataacttcaggatgtttggccagtcagtgtctggaggagttgatattgatagc
aacaattatccagatgttgcagtgggagctttcctgtcagactcagctgtggtcttcaga
acacgtccagtagtgaaggtggatgctgtcatgttgctgcctgagagcttgaaccggtcc
atagcccaatgcaccgagaacggtcttcctgccgtgtgtgtcaatgttatggtgtgcttc
agagtcagaggaaaacaaatcccgggaaacatagaactgaagtacaacataacagctgat
gttcaccacaaagatggcttcccttctcgtttttatttcaatggaaacggcacatccaat
gttacagcaggcagagtgaaggtcaagcatgagcagctcacctgtgccacccaccaggcc
ttcatgaagaaagacatccgggatatcttcacacccatccattttgaggtgaaatatgaa
cttggagagcaccgtgtgcttcagagggactcagggggcttgccttctctcaaacccatt
ctacagcagaaggatgaacaggccaatgtcgtgaaaaacaagaccacatttgccagatat
tgttcctgggaaaactgctcaaccaacctgcaggtttctgctcatttagctttaccgcag
tcctacaggaacatgccatactttgctctgggtaacgggaaaagcatcatgttaaacacc
acactggtcaacattggagatgatgcttttctacccaaactttacttgaggtttcccagt
aacctgcatttcatcaaagtgctggaggaagataaatacatcagctgtgaaatcgcagag
gagaataaagtggccatcggactggattgcaatgttgggaatttacacatccctcctttc
gcaaagatcaacatcacctttttactagatgtgatgcagaacagcagtgggggaaacctt
agtattaacatcaatgccacgagcgagaactttgagaacaaagatcttcagcacgacaac
gttgtcgttcttacgctgcccttgagatatgcagttgacctcaatgttcacgcatttgtc
tctccgacttcatttctgattggagaacaagagtctgtgccggtcgactgctatcctgaa
aagttcaattatacgtacaagatgataaatatgggtcctagtaaagctcttgatgcgaga
gtaaagattggcttgcctctgatgctggtgccatacaaataccagctaatcagcatcact
gatttacagacaactcttgggcattgcttccagaggaacaatacagttccgattattgat
gactgtgacatccccgaaccttcttttattcaagaactcgtgttctttttctccccaaag
agcaagcgcataatgttctgtggtcctgaagataagacctgtaggatggtggagtgccac
tttggtgacttggaggttggaaaggaagttgccatcacaatggaagtggagctcaaccct
agggttctccagatgagtccaggaagacatgctgtcatgatgatacaaggcatgattgac
ctcatttcacctgtaaaagatgccaacaccatcctattaaaagatgatgtttttgctaca
gtgttattggaggctctgtacagcaataagcctgtaatggctgtgcagatttttttaata
gtatccagtctgattgttggactgatcattttagcactgctcgtcctcaccctctggaag
ttgggattctttgagcggaagttgaagaaggagaagttaaaccgggacagttgggactat
gtacctaagaaagaaagtgtgtcataa

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