Carassius auratus (goldfish): 113052902
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Entry
113052902 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113052902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113052902
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113052902
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113052902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Pur_ac_phosph_N
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
PRY
zf-RING_2
zf-RING_5
DUF4998
Ig_J
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
113052902
NCBI-ProteinID:
XP_026073162
Ensembl:
ENSCARG00000026362
UniProt:
A0A6P6KLI4
LinkDB
All DBs
Position
34:1120103..1153247
Genome browser
AA seq
672 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCPSFDESSKPFSAFQCPSC
RYVITLDQQGLDGLKRNVTLQNIIDRFQKASLSGPNSPTETRRCNPPPVDDDRVMSSPSE
AVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDSRLRGLAC
PEHGEEKVNMYCVTDDQLICSLCKLVGHHREHQVAALGERFDKLKQMLDSNLSNLMKRNS
ELENLMAKLIQTCQHVEHNAALQENKLTEECDTLINIVQQRRQIISTKIKEGKVVRLRKL
AQQIASCKQFVERSSSLIAQADQVLKETDHARFLQTAKSVSERVSMATASSQILIPEINL
NDAFDGFALDFSREKKMLEALDYLTAPNAPNIREELCTASHDTITVHWSSEDEFSVVSYE
LQYTISTGQTNVVSLCNSMESWMIVPNIKQNHYTVHGLQSGTRYIFMVKALNQAGSRGSP
PAKLKTNSQPFKLDPKSAHRKLKVSHDSLTVERDEASSMKSHAQDRFGSSGNYGVPGNVF
IDSGRHYWEVLIGGSTWFAIGIAYKSAPKHGWVGKDSASWVLSRCNTSWAVRHNSKEFPI
EPSPHMRRLGVLLDYDLGSLSFYDAAGTQHLHTFDIAFSQPICPVFSVWNKCLTVLTGLP
IPDHLEISDPRD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgtccaatctgtctggagcttttcgaggatcct
ctactgctgccttgcgcccacagcctgtgcttcaactgcgctcaccgtattctggtgtcc
cactgtccctcgttcgacgagtccagcaaaccgttctctgcgttccagtgtcccagctgt
cgctatgtcatcaccctcgaccagcagggactagacggcctcaagcgcaacgtcactttg
cagaacatcatcgaccgcttccagaaggcgtctctgagcggcccgaattctccgaccgag
acgcgtcgctgcaatcctccgccggtggatgacgacagggtcatgagttcgccgagcgaa
gccgtccagtgccagttctgtgagcaggacccgccgcaggaggcggtcaagacctgcgtc
acctgcgaggtttcgtattgtcaggaatgcctgcgtgcgactcacccgaacaagaagccg
tttacgggacaccggctcacggagcctgtaccggactctcggctccgaggactggcctgt
cccgagcacggagaggagaaggtcaacatgtactgcgtgacggacgatcagctgatttgc
tcgctgtgcaaactggtcgggcatcaccgtgaacaccaggtggcagcactgggagagcga
ttcgataagctgaagcaaatgttggattcgaacctcagcaatctgatgaagaggaacagt
gagctggagaacctgatggcgaagctgattcagacgtgtcaacatgtggagcacaatgca
gctcttcaggagaacaaactgacagaagagtgtgacacgctgataaacatcgtccagcag
agaagacaaatcatcagcaccaagatcaaagaaggaaaggtggtccgcttgagaaagctg
gctcagcagatcgctagctgtaagcagttcgtggagagatcgtcctcgctcattgctcaa
gccgatcaggttctgaaagagacggaccacgctcgattcctgcagaccgccaagagcgtc
tcggagcgagtgtcgatggcgacggcgtcctcacagatcctgatcccagagatcaacctc
aacgacgcgttcgacgggttcgcactggacttctccagagagaagaagatgctggaggct
ctggattacctgaccgctccgaacgctcctaacatccgcgaggagctctgcacagcgtct
cacgacaccatcacagtccactggagctcagaggacgagttcagcgtggtctcgtacgag
ctgcagtacaccatctccaccggacagaccaacgtcgtcagtctgtgtaactcgatggag
agctggatgatcgtgcccaacatcaagcagaaccactacacggtccacggcctgcagagc
ggcaccaggtacatcttcatggtgaaggccctgaatcaggctgggagccgcggcagtcct
ccggccaaactcaagaccaacagtcagccgttcaagctggacccaaagtcggcccacagg
aagctgaaggtgtcccacgacagtctgacggtggagcgggacgaagcctcgtcgatgaag
agccacgctcaggaccgcttcggcagctcagggaactacggcgtgccggggaacgtgttc
atcgacagcggcagacattactgggaggttctgatcggaggaagcacatggtttgctatc
gggatcgcctacaaatcggctcccaagcacggctgggtggggaaggactcggcatcatgg
gtcctgagccgctgtaacacctcgtgggccgtgcgtcacaacagtaaggagttccccatc
gagccgtctcctcacatgcggcgtctgggcgtcctgctcgactacgacctcggctcgctg
tcgttctacgacgccgctggaacgcagcacctgcacaccttcgacatcgccttctctcag
cccatctgtcccgtcttcagcgtctggaacaagtgtctgaccgtcctcaccgggctcccc
atcccagaccacttagagatcagcgacccgcgcgactga
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