Carassius auratus (goldfish): 113052909
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Entry
113052909 CDS
T07313
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113052909
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113052909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
113052909
NCBI-ProteinID:
XP_026073171
Ensembl:
ENSCARG00000026598
UniProt:
A0A6P6KNZ7
LinkDB
All DBs
Position
34:complement(1211889..1218932)
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AA seq
988 aa
AA seq
DB search
MERGLLFARILGVTLVCVSLRSQVVSEERTVRYKIYEEVRPPTVIGTLASNVTWTPDKTR
RTFPGIRFKLMSPSTGSFIRFRESDGRLTVEERVDRERVCKRNPRCVITFDVAFVSAEQF
ELFHVEVDVLDVNDNSPEFPRAECTVEISESAALGTRIALDAAEDADVGSNSIQTYHLSE
NTHFSIDVVTRVDGVKYAELVLVKELDRESRAFFALKLVAADGGHPARSGATNVTVQVKD
ANDNSPLFDHSHYSVDVPEDTPVDSLLLDLNAVDPDEGLNGQVVYEFGKQVTKKIIQLFK
LDYKTGHLILQSPVDYEDETTYEIDVQASDLGNNPVPSVCKIIINIRDVNDNPPEIILTP
ITSVTDGVAHVSEATGPDILVALISIRDLDSGANGQVSCTLNGGHENFRLKRAYEGSYTI
VTMAPLDREKIAEYNLTVVAEDFGVPPLRTVTHYIIRLTDVNDNAPTFSAKTYEGFIEEN
RLPGTYITTILASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKR
LDLRVQASDRGWPQLHSNAVLIINIVDQNDNTPSITQPPLVNGSAEIQLPRDAPPGYIVT
QIVAIDPDADLNAELTYKLCDGGNLGFAIDPNTGEIYINRKIAYDEYDLWKVVLTVNDNG
HPSLTSTATIHFTLTESVPSNANFYDEREDGEPKPWMLILILALTSSSLLFLAILLLILC
KSRKNGQKRQANVPDTVDIPYAKEHNTVSMISGQTANVFDTDAFHNTNVIGTPEKLHSSV
QATAEVFNETSQTFKSKYRSVVGEIDGYSTLPGYGKDNARPITIWKGNSMMTIAVRDPQI
SGKDSGKGDSDVNDSDSDISEGLKKDYSSYKGLWACTSECRILGHSDRCWSPSVSRTSGS
INNRHLSTFSRTRPCSNATLQRITYDTQPNRSVALHSLTEDQQSQYDYIHVCSPQSQRRR
DSQNIDVKVFTHSTEPIATESPSRFTEA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggacttctgttcgcgcggatacttggagtcacgctcgtctgcgtttcgctg
cggtcacaggtcgtttctgaggaacggacggtgaggtataagatatacgaggaggttcga
ccgccgacggtcatcggaactctagccagcaatgtgacctggaccccggacaaaacgcgc
aggactttcccaggcatcaggtttaagctcatgagcccgtccaccgggtccttcatccgg
ttcagggaaagcgacgggaggctgacggtagaggagcgcgtcgaccgcgagcgcgtctgc
aagcgcaacccgcggtgcgtaatcactttcgacgtcgccttcgtgtccgccgagcagttc
gagctcttccacgtcgaggtggatgtgctggacgtgaacgacaactcaccggagttcccg
cgcgccgaatgcaccgtcgagatctccgagagcgcggcgctggggacgcgcatcgcgctg
gacgccgccgaggacgcggacgtgggctccaactctatccaaacctaccatctgagcgag
aacactcactttagcatcgatgtcgttacgcgggtggatggggttaaatacgcggagctg
gtgctcgtcaaagagctcgaccgcgaatcccgcgcttttttcgcgctcaaactcgtggcg
gcagacggcgggcatcccgcgagaagcggtgccactaatgtcacggtccaagtgaaggat
gctaatgacaacagcccgctgtttgaccacagccattactctgtggatgtcccagaggac
acccctgtcgattcactactgctagacctaaacgctgtcgatccagacgaagggctgaat
ggacaagtcgtgtatgaatttggcaaacaagtcacaaaaaagatcatacaactgtttaaa
ctggattataaaacaggacatttgattttgcaaagccctgttgattatgaagacgagacg
acatatgagatcgacgtacaagccagcgatttagggaacaatccggtgccctccgtgtgc
aaaatcatcatcaacatcagagatgtgaacgacaacccgcctgaaatcatcctcacaccc
atcacgtcagtaacagatggtgttgcacatgttagcgaagctacaggtccagacatcttg
gtagctttaatcagcatcagagacttggacagtggagcgaacggtcaagtgagctgtact
ctgaacggcggacatgaaaacttcaggcttaaaagagcgtatgaagggagctacacgata
gtcacaatggcacctttggatagagagaagatcgcggagtacaatttaaccgtggtggct
gaggacttcggtgtaccgccgttacgcacggtaactcattatattatacggctaacggat
gtcaacgacaatgcaccgacattcagcgctaagacatatgaaggtttcattgaggagaat
cgacttccaggtacctacatcaccacgattttagccagcgatcaggattcggggcttaac
ggggaaataacctatgagctttttgactcggacaccaacagcgtttccaggtttgctatt
atgaatcaagcggggaacgtttacgccttgcaaagtttcaattacgaagtcacgaagcgg
ctcgatcttcgcgtccaggctagcgatcgaggatggccgcaacttcacagcaacgctgta
ctgattatcaatatagtcgaccagaatgacaacacgccttcgattacgcaaccaccactc
gtcaacggatctgccgaaatccagcttcccagagacgcgccgcccggttatatcgtgacc
caaatcgttgcgatagatcctgatgccgatttgaatgcagagctcacttacaaactctgc
gacggaggcaatttgggtttcgccattgatccgaatactggggaaatatatatcaaccgc
aaaatcgcttatgacgagtatgacttatggaaagtcgtattgacggttaacgacaacggt
cacccgtcgctaacctcaacagctacgattcatttcaccctaaccgagtctgtgccctca
aatgccaatttctatgacgaaagagaggacggcgaaccaaaaccatggatgcttatttta
atcttggctttgacgagttcctcattgctgtttttggctattttattgctcatactatgc
aaaagtcgcaaaaatggccagaagagacaagctaacgtccctgacacagtggatattcct
tacgctaaagagcacaacacagtgtcgatgatctccggccagacggccaatgtgttcgac
acggatgcatttcacaacacgaacgtcatcggcacgcctgaaaaactacacagcagcgtg
caggcaacggctgaagtttttaacgaaacctcacagaccttcaagagcaaatataggagt
gttgtgggggaaatagatggatattccactttgcctggttatggtaaagacaacgcccga
cccatcacgatatggaaagggaactctatgatgaccatcgcagtcagagacccacaaatc
agcggcaaagacagcggaaaaggagacagcgatgttaatgacagtgattctgacatcagt
gaaggcctcaagaaagactatagttcatataaaggtctgtgggcttgtaccagcgagtgc
aggatcctgggtcactcggacagatgctggagcccgtctgtgagcagaaccagcgggagc
attaataacagacatctctcgaccttctcaaggacgaggccgtgctcaaatgccacgctt
cagaggatcacttacgacacgcagcccaacagaagtgtggccttgcacagccttactgaa
gaccagcagagtcagtatgattacattcacgtgtgctctccacagtcacagcggagacga
gactcacagaatatagatgtgaaagtcttcacacactccaccgaacccatcgccacagag
agtccctctagatttacagaagcctga
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