Carassius auratus (goldfish): 113052937
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Entry
113052937 CDS
T07313
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113052937
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113052937
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
Zip
Neur_chan_memb
IQCJ-SCHIP1
IQ
Motif
Other DBs
NCBI-GeneID:
113052937
NCBI-ProteinID:
XP_026073218
Ensembl:
ENSCARG00000039106
UniProt:
A0A6P6KLM6
LinkDB
All DBs
Position
34:2606357..2651696
Genome browser
AA seq
1953 aa
AA seq
DB search
MAHSFTPPGPKSFHKFTRESLKAIESRIAEENSRKSKDKHERNKNDECRRKPNSGLEAGK
NLPFIYGDVPRGLVSTPLEDLDQFYSSQATFIVVNKKKTISRFNAAPALYIFSPFNPLRR
ISIKILVHSLFSIFIMFTILANCTFMVYSQPPDWAKNVEYAFTGIYTFEALIKIIARGFC
VGQFTFLRDPWNWLDFMVIVMAYLTEFVDLGNVSALRAFRVLRALKTISVIPGLKTIVRA
LIQSVKKLSDVMILTLFCLSVFALVGLQLFMGVLKHKCVLQSSNQNFTDYMVKNATRCYE
IPDCMEYITNRSNHYIPTGKKDALICGKSSDAGQCPENFVCVKVGPNPDYGYTSFDSFGW
AFLSLFRLMTQDYWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQN
QATMDEALKKEEEFNAMIQQLMRQEEEAQAETEACDGLSGEKTDSSSDTSKLSSKSAKER
RNRRKKRQRQGEGEKEEDSNRERNYRKASFRLTSDGKIKSTRERTYTSPHQSPLSFQGSI
LSPRRDSKGSIFNFRRRVNSENNYADDEQSMCEETGSRRDSLFLPSRSERLYSTLSKSSL
TPRILLPSNGKVRYVVDSNGMVIVSGGASSPNSPSGILTPEVSRKRATFDDTCYDTDEER
RRSGSRTFSKGFLYDQSARQRALSIASVSNNPTDSSEILKQKCMECWINFAENYLIWDCS
PTWLKIKKTVHMVVMDPFADLFITICIVINTVFMAMEYYPMKNEYVYMLSTANVVFIGIF
AAEMIFKIVALDPYTYFQEGWNIFDSIIVTLSLLELCLTNVVSGIGFLRPFRLLRVFKLA
KSWPTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISEDCTLP
RWHMYDFFHSFLIVFRVLCGEWIETMWDCMEVSGQPLCLIVFMMVMVIGNLVVLNLFLAL
LLSSFSADNLAAPEDEVEKNNLQIAVGRIKKGFALFKACLQNFFRSGCLRRKPKKKTIDG
NTIGRNCKGINDNSNHTTLELVKGTGDTNMDSDTENYISNPSLVVSVPIADEESDFQCLN
TEDFSSFSLDLEDKEKLSNVAPSSSEGSTVDLRHFGKDGEEALDFELEESTDPDACFTPG
CVQKFPCCQVDVEKGMWKKWWLLRQTCYNIVEHSWFESFIIFMILLSSGALAFEDIYLET
RKTVKTMLEFADKVFTYIFILEMLLKWVAYGFAKYFTNLWCWLDFVIVDVSLISLVANAM
NYSDLSAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIV
GVNFFAGKFSECVNITSDKRMPITDISNRTECELRPEELRWRNVKINFDNVGNGYLALLQ
VATFKGWMPIMYAAVDSRKVEEQPEYEVNLYMYLYFVVFIILGAFFTLNLFIGVIIDNFN
QQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNKIQGFIFDLVTKQAFDIFI
MVLIWLNMVTMMVETDGNSPDILYWINVAFIVLFTSECMLKMIALRQYFFTVGWNVFDFI
VVILSIVGMFLAEIIKKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKKSAGIDDMFNFETFGNSMLCLFQITTSGGWDGLL
APMLNSEPPDCNPNKTFPGSKVIGDCGNPSIGISFFVSYIIICFLVVVNMYIAVILENFS
VATEESAEPLSEDDFDRFYEVWEKFDPNATQFMEYNKLSDFANSLDPPLRIPEPNRLQLI
SMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKSSYEPITTTL
RRKHEDTSAAIIQRAFRKHLVRHSMKKVHNTKQQNGNVPSKESVDNDKCNDSGTSEDTDT
MPAISSPSLSQNTTNKYEKDKHEKEVEDKGNGV
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcgtttactccaccaggacctaaaagtttccataagttcacccgtgaatct
cttaaggccatcgagagccggatcgctgaggagaactccagaaagtccaaggacaagcat
gagagaaataaaaacgacgaatgcaggaggaaacccaacagtggcctggaggccgggaaa
aatctgcccttcatatacggagacgttcccagaggattggtgtccacaccactggaggac
ctggaccagttctacagcagtcaggcaacttttatagtagtgaacaaaaaaaagacaatc
agtcgtttcaacgccgctcctgccttgtacatcttcagtcccttcaaccctctgaggaga
atatcaattaagattttggtgcattcattgttcagtatatttataatgttcactatcctg
gcaaactgcactttcatggtgtactcacagcctccagactgggccaagaatgtagaatat
gccttcactgggatatacacctttgaagcgctcataaagatcatcgccaggggattctgt
gtgggacagtttacgttcctcagagacccgtggaactggttggattttatggttatagtc
atggcatatttaacagagtttgtggatctgggtaatgtgtccgccctgcgagcgttcaga
gttcttcgcgccctgaaaactatatcagtcatcccagggctgaaaacaatcgttcgagct
ctgatccagtcagtgaagaagctgtcagatgtgatgatcttgactcttttttgcctaagc
gtctttgctttggtcggactgcagctattcatgggagttcttaaacacaaatgtgtgctc
cagtcatccaatcagaactttactgattatatggttaagaatgcaacgaggtgttacgaa
atacctgactgcatggaatacattacaaatcgaagtaaccattatatcccaacgggaaag
aaagatgctctgatctgtgggaaaagtagtgatgctgggcagtgtccagaaaattttgtc
tgtgtaaaagtaggtcccaatccagattatggttacacaagctttgattcctttggctgg
gccttcctttccttattcagactgatgactcaagactactgggagaatctttaccaacag
acacttcgggccgcaggaaaaacctacatgatttttttcgtgctggtcatttttttggga
tcgttctacctggtgaatctgatcctggctgtggttgccatggcatatgaagaacaaaat
caagccactatggatgaggctttgaagaaagaggaggagtttaatgccatgatccagcag
ctgatgagacaggaggaggaagctcaggctgagacagaagcatgtgatgggctcagtgga
gaaaagacggactcttcctcggacacttccaaactcagttccaaaagtgccaaagaaaga
cgcaaccgcaggaaaaagagacagcgtcagggggaaggcgagaaagaagaagattcgaac
agggagagaaattatagaaaggccagcttccgtttgacatctgatggaaaaatcaagagc
acacgtgaaaggacctacacgtctccacatcagtcccccctgagttttcagggttcaatc
ctcagcccacgtcgagacagcaaaggtagcatcttcaacttccgcaggcgtgtgaattca
gaaaacaactatgctgacgacgagcagagcatgtgtgaggagacgggcagccggagagac
tctctatttctaccctctcgatccgagcggctttacagcactcttagcaaaagcagtctg
acgccgcgtatactgttgccgtccaatggaaaagtacggtacgtggttgacagcaatggc
atggtgatagtgtcaggcggagcgtcttcacccaactcgccctccggaatactgacgccg
gaggtgtccagaaaaagagccacgtttgacgacacttgttatgacacagatgaagagcga
cgccgatctggttcaaggaccttttcaaagggttttctatatgaccagtctgcgagacag
agagctttgagcatcgcaagtgtcagcaacaaccctactgactcgtcggagatcttgaaa
cagaagtgtatggagtgctggatcaattttgctgagaattatctgatctgggattgcagt
cccacatggctgaagataaagaaaactgtccacatggttgtgatggaccccttcgcagat
ctgtttatcaccatttgcatagtgataaacacagtattcatggccatggagtattatccc
atgaaaaatgaatatgtttacatgctttcaactgccaatgtggttttcatagggatcttt
gcagcggaaatgatattcaagattgttgcattggacccgtacacttactttcaggaagga
tggaatatctttgacagcatcatagtcacactgagtctgctggaactttgtttgacaaat
gtggtgtctggaatcggttttcttaggccattcagactgctgagagtcttcaaactagct
aagtcctggccgactctgaacatgctaatcaagatcattggcaactcactaggtgccttg
agcaacctgacgcttgtgctggccatcatcgtcttcatcttcgctgtggttggcatgcaa
ctgttcgggaagaactaccgtgactgtgtgtgtaagatttctgaggactgcacgcttcct
cgctggcacatgtacgatttcttccactcgttcctcattgtcttcagggttttgtgtgga
gagtggatcgagaccatgtgggactgcatggaagtgtcgggacagccattgtgcttaatt
gtgttcatgatggtcatggtcattggaaatctggtggttctgaacctgttcctcgctctg
ctgctcagctcattcagtgctgacaaccttgcagcccccgaagacgaggtcgaaaagaac
aacctgcagatagcagttggccgaatcaagaaaggttttgctttatttaaggcctgcctt
cagaatttcttccggagcggctgtttaaggaggaagccaaaaaagaaaaccatagatggg
aacactattgggagaaactgcaagggaataaatgacaactccaaccacaccacactagag
ctggttaaaggcactggagatacgaacatggatagtgacactgagaattatatcagcaat
ccaagcttggtcgtcagtgtcccgatcgctgatgaagagtctgattttcagtgcctcaac
actgaggatttcagtagcttttctttagacctagaggacaaagagaagctgtctaacgtg
gctcccagctcttcagagggcagcacggtggacctcagacacttcggtaaagatggagaa
gaagctttggactttgaacttgaagaatctacagatccagatgcctgtttcacaccaggg
tgtgtccaaaagttcccgtgctgccaggtggatgttgaaaagggcatgtggaaaaaatgg
tggctgctgagacagacctgctataacatagtggagcacagctggtttgagagcttcatc
atcttcatgattctgcttagcagcggtgctctggcatttgaggacatttaccttgaaaca
aggaaaaccgtaaagaccatgctggaatttgctgacaaagttttcacctacatcttcatt
cttgagatgctgctaaaatgggtggcatatggttttgccaaatacttcaccaatctctgg
tgctggttggattttgttattgttgatgtctctctgatcagcctggtagccaacgccatg
aactattcagatctgagcgccatcaaaagtctccgaacactgagagccttccgaccgctc
cgagctctctcacgctttgagggaatgagggtggttgtgaatgctcttctgggtgctatc
ccctccatcatgaatgtcctgctggtctgcctcatcttctggctcatttttagcattgtg
ggtgtcaacttcttcgccggaaagttttctgaatgtgtaaacatcacctcagacaagcgc
atgcctatcacagatatcagtaacagaacagaatgtgaactaaggcccgaagaactccgc
tggagaaatgtgaaaatcaactttgacaatgtaggaaatggatacctggccctgctacaa
gtggccacttttaaagggtggatgcccattatgtatgcagctgtagactctcgcaaagta
gaagagcagccagagtatgaggtgaatttgtatatgtacctctattttgtcgtcttcatc
atccttggagcttttttcacattaaatctcttcattggggtcatcattgacaacttcaat
cagcagaagaagaagtttgggggtcaggatattttcatgacagaagagcagaagaaatac
tacaatgctatgaagaagctcggctcaaagaaaccccaaaaacccattccaaggccaaaa
aacaagattcaaggattcatctttgacctcgtaaccaaacaggcatttgacattttcatt
atggtccttatatggctcaacatggtcactatgatggtggagacagacggtaattcccca
gatattctgtactggatcaatgttgccttcattgtgctctttaccagcgaatgtatgcta
aagatgatcgcgctacggcagtacttcttcactgtcggctggaacgtattcgacttcatc
gtggtcatcctgtctatagttggcatgttcctggcagaaatcattaagaagtactttgtc
tcacccaccttgtttcgtgtcattcgcctcgcccggatcggccgcgtgctacgtcttatc
cgaggcgccaagggaatacggacccttctgtttgcattgatgatgtcacttcctgccctt
ttcaacattggacttcttctcttccttgtcatgttcatctatgccattttcggcatgtcc
aacttcgcctatgtcaaaaaatcggccggcattgacgacatgttcaactttgagacattt
ggcaacagcatgttgtgtttgtttcagatcaccacatcgggaggctgggatggccttctg
gcgcccatgttaaatagcgaacctcctgattgcaaccccaataaaaccttccctggcagc
aaggttataggcgactgcgggaacccatccatcgggatttccttctttgtcagttatatc
atcatatgcttcctggtcgtggtgaacatgtacatcgctgtcatcctggagaacttcagc
gtggccaccgaggagagcgccgagcctttgagtgaagacgactttgataggttttacgag
gtttgggagaaatttgacccgaacgccacgcagttcatggagtacaacaagttatcggac
ttcgccaattctctggatcctcctctgcgaatacccgaacccaaccgactgcagctgatc
tccatggatctgccaatggtgagcggtgaacgcatccactgtctggatatcttgtttgct
ttcaccaaacgagttcttggggaaggtggcgagatggacgtccttcgcggacaaatggaa
gaacgattcatggcctccaacccctcaaagtcctcttacgagcccatcaccacaaccctg
cgtaggaagcatgaagatacgtctgctgcaatcatccagagagccttcaggaagcacttg
gtccgacatagtatgaagaaggtccataacaccaagcagcaaaacgggaatgtcccaagt
aaagagtctgttgacaatgacaagtgcaatgatagtggcacttcagaagatactgacaca
atgcctgccatatcttctcctagcctgtcacagaacaccaccaacaaatacgagaaggac
aaacatgagaaggaagtggaagacaaaggtaacggggtttag
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integrated database retrieval system
