Carassius auratus (goldfish): 113053088
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Entry
113053088 CDS
T07313
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113053088
03015 mRNA surveillance pathway
113053088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113053088
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113053088
mRNA cycle factors
P-body specific factors
113053088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
DUF6980
SUKH_6
Motif
Other DBs
NCBI-GeneID:
113053088
NCBI-ProteinID:
XP_026073548
Ensembl:
ENSCARG00000045499
UniProt:
A0A6P6KMN5
LinkDB
All DBs
Position
34:8970149..8978645
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AA seq
478 aa
AA seq
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MRSEKEQRIGSRERGSVEILFWDCQREQDNVAVNPKHKEEKKETFTKVVIRRLPPSLSKD
QLEEHLSPLPSFDYFEFFSADQSLYPHLFSRAYINFKNPEDIIVFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKVSKKKLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRVREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSEKEIKIKLLKKCDLEDDMDSDRLKDKADSGENRWGKPAGHTKSKDSK
DNRSQIKSDKEQREGHGCRQRDKEHHSRDEERKRQRHHYEFDKFMRRKEETKWGKGYCQD
RAKKDQHHGHSFCPETGDKLGKEDREDMGSRKERIRNKSVLVHQEKRTSQSEGPDQIGGA
LPAKDRPAMQLYQPGARNRKRIGSGNKMFDFPPISPEHGGEHCHKTLIGTGSQKSVDE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggagcagaggataggaagcagggagagaggcagcgtcgagatcctg
ttttgggactgtcagagggagcaggacaacgtcgcggtgaacccgaagcacaaggaggag
aaaaaggagaccttcaccaaggttgtcatacgccgactgccacccagtttatcaaaagac
cagctcgaggagcatctgagtcctcttccatcttttgactattttgagttcttctccgct
gatcagagcttatatccacacctcttctcaagagcatacatcaacttcaaaaacccagag
gatatcattgttttcagagatcgctttgatggctatgtattcattgataataaaggccaa
gagtatccagctgttgtagaatttgctccatttcagaaagtttccaagaaaaagttaaag
aagaaagatgctaaagcaggaactattgaagaagacccagaatacaggcgatttctggaa
aattactcttgtgatgaggagaaatcaatggccaatccagaaacactattgggagagatt
gaagctaaaacccgagaactcatagccaaaaggaccacaccgttgctggaatacatcaaa
aacaagaaattagagaaacagagagtacgagaggaaaaaagagaggagaggcgaaggagg
gaactggaaaagaagcgacagagggaagaggagaagcggaagcgcagagaagaggagaga
cgaaagaggaaggaggctgaaaagcagaagaagctttctgaaaaggagataaagatcaag
cttctgaagaagtgtgatctagaagatgacatggactctgacagactgaaagataaagca
gacagtggagagaacagatggggaaagccggcaggacacactaagtcaaaggattccaag
gataataggagtcaaatcaagagtgacaaggagcagagggaaggacacggctgtcggcaa
agagacaaagagcatcacagcagagacgaggagcgcaaacgacagaggcatcactacgag
tttgacaagtttatgcgacgcaaggaggagaccaaatggggtaaaggctactgtcaggac
agagccaagaaagaccaacatcatggccattctttctgcccagagactggagacaaactc
ggaaaagaggatcgagaagacatgggcagcaggaaagaacggattcgcaataagtctgtg
ttagtgcatcaggagaaaaggacttcccagtctgaggggccagaccagataggaggggct
ctgccagcaaaggaccgaccggcaatgcagctgtaccaacctggtgctagaaaccgcaag
cgaattggctctggaaacaagatgtttgacttcccaccaatctctcccgaacacggagga
gaacactgccacaagacactcattggtacaggctcacagaagagtgtcgatgagtga
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