Carassius auratus (goldfish): 113053184
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Entry
113053184 CDS
T07313
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113053184
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113053184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Plasmod_Pvs28
DUF7504
PHF20_AT-hook
Motif
Other DBs
NCBI-GeneID:
113053184
NCBI-ProteinID:
XP_026073785
Ensembl:
ENSCARG00000035473
UniProt:
A0A6P6KNA3
LinkDB
All DBs
Position
34:11473329..11485568
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AA seq
1081 aa
AA seq
DB search
MWKLTWTSVLCCLGCIFAVGQLDISAGEVDWIPMLGNPDKHSQRLFQMFVEKPGDHGLLP
RHKRNVYLSSGVRHCSRETVQQAITDHLKYYQLRVCQEIVWGAFKIFLDRLPNQEEYKSW
MSQCQTERVSIQEIGAAFSQSEEHLALIHRRLAQTRLKSKTPTYSLCSSTEESSQEQDRA
PTDLVGDELPAATTVMVTTAVPDEVISESMKEVTAEATSAVMIMEMDTEITNEIEQEAAA
LPSGPLVEQRVELAMLLTGEPWSEELFNSTSSKHGRLTQRITEKISDALEELKEFKSVSV
LNIRPQLDPLSGDKAVLVEYVVSLQSSSEKISSETLDFIHLQSNMVEGTFSYLERPTVQY
TIIDLHPDITEALHVEISPEETHPAEESIDPDHKDDILAVEKPSKLPGEVVQEVFTVGDL
LDSTMSEEEDLQDKDLVSQFPPNQTLAVEGEAVAPFIDTKLDFDLKMDDFDLASGSGAED
DWVTVLTRAQEPDGETEGKEEVLSDVDKPQIEDYEFYTIATVVEEDQILPEETPELITVK
AGEDGNLQVGSNVPTMPPVKVDEAESTLKPEEDLILPEDKEGTVLTEKQKDGETEVALIT
KDESEGVEVEELEESVDSTTMAHQNDFVLTDGSAIQFSEEVLTEDEILLVTIEPESPVYP
TRISPEKEPPFSLNPMITPAEVELVHTLNSEVMTTFLDVIHYKEVEGSGIPGVIQGGEVS
SVVLPTNPGRSLMVFFSLRVTNMIFSEDLFNKSSAEYKALEQQFLELLVPYLQSNLSHFE
NLEILNFRNGSIVVNSRMKFGKPIPREVITAVYIILEDFCNTAYQTMNLAIDKYSLDVES
GQQADPCRFQACNEFAECTVNQWSGEAECVCNAGYFSVDGLPCQSICDLQQDFCLNHGKC
DVIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVVGFLLVASGVIIFLVRTL
RHQYEKDETEDPVRGEDSPPFLDRATKYNPMFESEFTTGYSHYYQQYPRPLVHSSPSAEA
STEFSSEEIRHVYENSELTKEDIQDRIRILELYTRDRQFADFLKQHQIAMDNQRESFSNS
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctcacatggaccagcgtcctgtgttgtttaggctgtatttttgcagtaggc
cagctggatatttctgcaggggaggttgactggattcccatgcttggaaatccagataag
cattcacaaagattgtttcaaatgtttgtcgaaaagcctggagaccatggactattgcca
aggcataagcgtaatgtttatctgtccagtggagtacgccactgcagtcgagaaacagtg
cagcaagccatcactgaccacctcaaatactaccagctcagagtgtgtcaggaaatcgtg
tggggggctttcaaaatcttcttggaccgcctccccaatcaagaagaatacaagagctgg
atgagccagtgtcagacagaaagagtctccatacaggagattggcgctgcctttagccaa
tcagaagaacacttagcacttatccacagaagacttgcgcagacgagactgaaaagtaag
acacctacatactctttatgcagcagtactgaggagtcttctcaagagcaagaccgtgcg
ccaacagacttggtaggtgatgagcttccagcagcgaccactgtgatggtgaccacagca
gttccagatgaggttatctcagagagcatgaaagaagttactgcagaagccacatctgct
gtcatgataatggagatggatactgagatcactaatgagattgagcaggaagcagctgct
ttgccttcaggtcctctggttgagcagagggtggagttggctatgttattgactggagaa
ccatggagtgaagagctgttcaactccaccagcagtaaacatggcagactcactcagagg
atcacagagaagatttcagatgctttggaggaattaaaagaattcaagagtgtatcagta
ctgaacatcaggccacagctggatcccttaagtggtgataaagcagtattggtggaatat
gttgtgtccctccagtccagcagtgaaaagatcagcagtgagacactagacttcattcat
cttcaatccaacatggtagagggcacctttagttacttagagaggcccactgttcagtac
accattattgacctccaccctgacatcactgaggctctgcatgtggaaatctctccagag
gaaacccatcctgcagaagaatctatagaccctgaccacaaggatgatattttagcagta
gaaaaaccatccaagctgccaggagaggtggtgcaggaggtctttacagttggtgacctt
ttggactctacaatgtctgaagaggaagaccttcaagacaaggacttggtgtcacagttt
cctcctaaccaaactcttgctgtggaaggtgaagctgtagctccctttattgacaccaag
ctagactttgacttgaaaatggatgactttgatctcgcttctggatctggtgcagaagac
gattgggtaactgttcttactagggctcaagagccggatggagagacagagggtaaggaa
gaggttttaagtgatgtagacaaaccacagatagaggactatgaattctacacaattgca
acagtggttgaagaggaccagatcttgcctgaggaaactcctgaactgataactgttaaa
gctggagaagatggaaacctacaggttggtagcaatgtgcccacaatgccaccagtcaaa
gtggatgaggcagaatctaccctaaaacccgaagaagacctcatactacccgaagacaag
gagggaactgttttaacagaaaagcagaaggatggggaaactgaagttgcattgatcaca
aaggatgaatcagaaggggttgaagtagaggaattggaagaatctgttgacagtaccaca
atggcacatcagaatgatttcgtactaacagatggttcagctatacagttttcagaggaa
gttctaacagaggatgagatcctattggtcaccattgaaccagaaagcccagtctaccca
acacgtatttcacctgagaaagaaccacccttctccctcaaccccatgataaccccagcg
gaggttgagttggtgcataccttaaattcagaagtcatgactacatttctagatgtgatc
cattacaaagaggtagagggtagtggcatccctggtgtaatccagggcggtgaggtttcc
agcgttgtcttgccaactaaccctgggcggtctttgatggtgtttttcagtcttcgtgta
accaacatgatattctctgaggatctgttcaataagagctctgcagagtacaaagccttg
gagcaacagttccttgaactgctggtaccatatttgcaatcaaacctcagtcactttgag
aacctggagatcttgaacttcagaaatggaagtattgtggtgaacagccgaatgaagttt
gggaagcctattcctcgtgaagtcattactgctgtttacatcattctagaggacttctgc
aacaccgcttaccagaccatgaacctcgccattgacaaatattcattggatgttgaatca
gggcaacaggcagacccgtgcaggtttcaggcatgtaatgagtttgctgaatgcacagtg
aaccaatggtcaggtgaagctgaatgtgtgtgtaatgctggttacttcagcgtggacgga
ctaccctgccagagcatctgtgaccttcaacaagacttctgcttgaatcatgggaaatgt
gatgtcattccaggccaaggagccatctgcaggtgccgtgttggggaaaactggtggtac
cgaggagaacattgtgaagagtatgtttctgagccactcgtggttggcattgccatagca
tctgttgtcgggttccttctggtggcgtcaggagtaatcatcttcctagtaagaactctg
agacaccagtatgagaaggatgaaacggaggacccagtacggggagaggacagcccacca
tttctagacagagccactaagtataaccccatgttcgagagtgaattcactacaggttac
agccattactaccagcagtaccccaggcccctagtccacagcagccccagtgccgaggca
tccacagagttcagcagcgaagagatacggcatgtttatgagaacagtgaactcaccaag
gaggatattcaagatcgtatccggattcttgaactctacacaagagatcgtcagtttgca
gattttttgaagcagcatcaaatagcgatggataatcaaagggaaagtttctccaatagt
aaataa
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