Carassius auratus (goldfish): 113053238
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Entry
113053238 CDS
T07313
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113053238
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113053238
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113053238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
113053238
NCBI-ProteinID:
XP_026073883
Ensembl:
ENSCARG00000046351
UniProt:
A0A6P6KNJ3
LinkDB
All DBs
Position
34:12702753..12867345
Genome browser
AA seq
1267 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNPGGSPACGSAAGTPGTAPTPRELEIQETLMSEHFQICKTVRH
GVPYQPTALAFDPVQKILAIGSRSGGVRLLGRPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRAKRADFRI
YYDEAIHSASWHHEGRQFMCSHSDGSLSLWNLRNTAKPFQVTFPHGKTQRDGRKESCKPI
LKVEYKTSRNSSEAFVVFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVDFLVLCETP
YLNEVQEPYAVVVLLEKDFVVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSHKEWPVSGGTWTVGSQTYPEIIITGHADGSIKFWDATAITLQMLY
KLKTSKVFEKPKGGDVGRNAELAEEDPYAVQMISWCPQSRIFCVVGISAHVILYRFSKHD
ANTTITSLEVRLQCEIEDVISPSDAENTPCFSDPSGHSPQPQPPSPRSNTPDSMRDSIPC
LKVKDRMIRMPPGYQAELVVQLLWIDGEPPQQITSLDLNSAYGLLALGNCNGLAVVDYLQ
KTILLCMSTLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFHSDSKKRIRTSYQSLT
ELSDNQVSLDLERSKSPTSAPYAPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKGPGR
KLSLPTDLKTDLDHVNGHCTSPTSQPCLTGRARVPGGPEGPRLARRGPGRPPFRKAQSAA
CMEVSLPVSSLTEGYPSRRAMLQQLHGVSMYSHDEQHITTYSWSERESRENSFSRSRSSS
VSSIDRETKEAVTTLQFAESYVRKSDTLPTPCLWVGTSLGLVLIIPMSIPTDEQERLEDP
VTVAPTGTVLMLKGSVLRIGFLDCGGVLINSPYEVWRDQHAPDDPDRPRKRKLVNFSPSS
SQEASGDGHLAVVCSERQAKVFFMPSQACLYVHNITESSFVLRADVVSVYNSVCLACFCA
NGHIMTLSLPSLRPLLDVSYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQEMCD
NLQEMLGELFTPIETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGQ
GGMEGMKAAAGGVVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLKCK
DKKWYQF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggttttggacgggttgaccacttcttcacctgtcaatccaggt
ggatcccccgcgtgcggcagtgcggctgggacccccggtacggcaccgacaccgcgggag
ctggaaatacaggagacactaatgtctgagcacttccaaatctgcaagacagtgcgtcat
ggagttccctatcagcccacagctctggcatttgacccggtgcagaagatccttgccatt
ggctctcgttccggaggagtacggcttctgggacggccaggagtggactgtcattgccag
catgagagtggggcggcagtcctccaactgcagtttctcatcaatgagggggcgctggtc
acagcttgtgcagatgacacactgcatctctggaacttgcgacagcgacgtccggctatc
ctacactctctcaaattcaacagagagaggatcacattttgtcatcttccatttcaaagt
aagtggctttacgtggggacagagcgtggaaatacgcacatagtgaacatagaatccttc
gttttgtctggatatgtcatcatgtggaacaaggccatagaactatcaacaaagacacat
ccaggtcccgttgttcatcttagtgacagtccaaaagatgagggaaagttgctgataggt
tttgagagtggcacaatagtaatgtgggatctgagggccaaaagagctgacttcaggata
tactatgacgaggctatacactcagcaagttggcatcatgagggacggcagttcatgtgc
agtcattctgatggcagtctgagcttgtggaacctgagaaacacagccaaaccttttcaa
gtcaccttccctcatggaaaaactcagagagatggaagaaaagagtcatgtaaacccatt
ctcaaggtcgaatacaagacctccagaaacagtagtgaagcatttgttgtcttctccggg
ggtctttcgtacgataaggcaggacgtagacccaccctaaccatcatgcatggcaaagcc
atcacagtgttagagatggactatccaatagtggacttcctagtgctctgtgagacgccc
tatctcaacgaggtccaagagccgtatgcagtggtggttctgctggagaaagattttgtt
gtggtcgatctaacccagagcaattttcctatctttgagaacccctaccccatggacatc
catgagtctccagtcacgtgcacggcttactttgccgactgtcctcctgacatcataccc
gtgctttactccataggagctaaacacaaaaagaccggctacagccacaaggagtggccg
gtcagtggtggcacatggacagtcggttcacagacatatccagagattatcatcacagga
catgcagacggatcaataaagttttgggatgccacagcgatcacactgcagatgttgtat
aagctcaagacgtcaaaggtgtttgagaagcctaagggtggagatgtgggacgcaacgct
gagcttgcggaggaagacccctacgctgttcagatgatcagctggtgcccgcagagccgt
atcttttgtgtagttggcatcagtgcccacgtcatcctgtaccgctttagcaaacatgac
gccaacaccaccatcacgtccctagaggtgcggttgcagtgtgagatagaggatgtcatc
tctccgtcggatgcagagaacactccatgtttttcggaccccagcggtcactcgccccaa
cctcagcctcccagtccccgcagcaatacaccggacagcatgcgggacagcatcccttgc
ctcaaggttaaagatcgtatgatccgaatgcctcctggataccaggcggagctggtggtt
cagttattatggatcgatggagagccaccacaacaaatcaccagcttggatttaaactcc
gcctacggactgttggctctaggtaactgcaatggtttggcagttgtggactacctgcag
aagaccattttgctgtgtatgagcaccttggagctttatggatctgcagaccctttccag
cgattaacacgctctcctcgcaaaaaccggcagtccacatcagacttttgcatgcggggc
ctgtctaactttcattccgattcaaagaaacggatccgtacttcctaccagagtcttaca
gagctttctgataatcaggtgtctttggacctagagaggagcaagtcacccacctcagca
ccctacgccccttccctccataatgaccctcgaggtacaggggaacctgtgtccaacctt
cggtcctgccactacagtcctgtgttttatctgttggacaatgtcaaaggaccaggcaga
aagttaagtctacccacagatcttaagactgatcttgatcatgtgaatggacattgcact
agccccacctcccagccctgtctgactgggagagccagagtcccagggggccctgaaggg
ccacgcctcgcccgcagggggcccggccgaccgcccttccgcaaggcccagtctgccgca
tgcatggaggtctctttgcctgtgtcctccctcaccgaagggtatccgtcccgacgagcc
atgctgcagcagttacatggagtcagtatgtactcccatgatgagcaacacatcaccacc
tactcctggagcgagagagagagtcgcgaaaattcattcagccgttcccggagttctagc
gtttccagcatagacagggaaactaaagaggccgttaccaccctgcagtttgcagagtca
tacgtgcgtaagtcagacaccctgcctacaccatgcttgtgggtgggcacaagtctgggc
ctggtgctcatcataccaatgtccattcctactgacgagcaggaacgcctagaagaccct
gttactgtggcccccaccggcacagtgttaatgctgaagggctccgttctgcggattggt
ttcctggactgtgggggcgtgcttattaacagtccctatgaggtgtggcgggaccaacat
gccccagatgacccagatcgaccccggaagcggaaactggtcaacttctcaccctcgtct
tctcaggaggccagtggagatggtcacttagctgtagtgtgttcggagaggcaggccaag
gtcttcttcatgccctcccaggcctgtctatatgtgcataacatcactgagtcgtccttc
gtgctgcgggctgatgtggtgtcggtttataacagtgtttgtctggcctgcttctgcgcc
aatggacacattatgactttgagtcttcccagtttacggcctctgctagatgtcagctac
ctgccgctaacagacatgcgcattgctagaacattctgcttcaccaacggagggcaggcg
ctgtatctgtgctcccccacagagatacagagaatcacttacagccaggagatgtgtgac
aacctacaggagatgttaggggagctctttacacccatcgagacccctgaggctcagaac
cgtggctttctcaagggcttttttggcggcaatgcccaaaccttcgaccgagaggagttg
tttggtgaggcagcagcgggtaaggcgtcccgcagcctggcacagcacatcccaggacag
ggcggaatggagggcatgaaggcggcagcaggcggggtggtgggagagctggcccgagct
cgcattgctctggacgagagaggacagaggctgggggagctggaggagaggaccgccctg
atgatgaccagtgccgaaaccttctctaaacacgctcacgagctgatgctgaaatgcaaa
gacaagaagtggtatcagttttag
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