Carassius auratus (goldfish): 113053390
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Entry
113053390 CDS
T07313
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113053390 (ift88)
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113053390 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_16
TPR_14
TPR_7
TPR_11
ANAPC3
TPR_17
TPR_9
SNAP
ARM_TT21_5th
TPR_10
TPR-S
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_2nd
DUF2225
TPR_MalT
HAT_PRP39_C
TPR_15
Coatomer_E
RPN7
DUF6584
ARM_TT21_C
RNPP_C
Consortin_N
HEAT_Nup120
Evf
TPR_4
Motif
Other DBs
NCBI-GeneID:
113053390
NCBI-ProteinID:
XP_026074159
Ensembl:
ENSCARG00000031909
UniProt:
A0A6P6KPD7
LinkDB
All DBs
Position
34:17308128..17321712
Genome browser
AA seq
855 aa
AA seq
DB search
MENVHLVPEEEEDDLYTGYNDYNPTFDGEDLHNDEGFQQAVRTSHGRRPPMTAKYPGTAI
GVRPLGTAYGFRMPVGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSIARGSVFDPLGQSK
GPAPPLETRNEDTPEEKIKILEKKVNDLIEESCLAHARGDLQLSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQVIVKNKMFSNAGRLKVNMA
NIYFKQKNYTKAIKFYRMALDQISNAHSAMRIKIMQNIGVVFIHMGQYSDAITSFEYIMS
ESPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGTDDDDKYIAPNDDPHGNMVIEAI
KNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFRQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYAELAMSA
DRYNPAALVNKGNTEFVKEDYEKAAEFYKEALHNDSSCTEALYNLGLSYKRLGRLEEALD
CFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDNE
GDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKM
KEIREQRVRSGRDSSARGRREGSAGSGSSSSPINTPPLRASVSRSEAKYSPVLEQGRDSG
QSNHGTSAKGERISAKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAAKKRTEE
DEFADEELGDDLLPE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgtcccagaggaagaggaggatgatttgtacactggctacaat
gattacaatccgacttttgacggagaggaccttcacaatgatgagggctttcagcaggca
gtcaggactagtcatggcagaagaccaccaatgaccgcaaaatatcctggcactgcgatt
ggagtgcgaccgcttggaacagcttatgggtttcggatgcctgttggcactgctatggga
aggcctatgactggagctgttcaggatggtgcagctcgtcccatgactgctgtgcgagca
gcaggatattcgtcatctatagctagaggctctgtgtttgatccactgggacaatcaaaa
ggaccggcccctcctttagaaacaaggaatgaagacactccagaggagaagataaagatc
ctcgaaaagaaggtgaatgacttgatagaggagagctgtctcgctcatgctcgtggggat
cttcagctgtctttagagaaagccaaggaggctggcaggaaggaaagggctttggtgaga
cagagagaacaaacaggcactgcagaccacatcaatctggatctgacctactccgtgttg
tttaatttagcaaaccaatatgccaataatgacatgtacaccgaggccttgaacacttac
caagtcattgtgaagaacaaaatgtttagtaatgccggacgactgaaagtgaacatggcc
aatatctatttcaagcaaaagaactacacaaaggcaatcaaattttaccgcatggctttg
gatcagatttcaaatgcccacagtgcaatgaggatcaagatcatgcagaacatcggagtt
gtgttcatacatatgggccagtactccgatgccatcacatcctttgagtacatcatgagt
gagagccccaacataaagacaggcttcaatctcatcctatgttactatgccattggagac
cgtgagaggatgaaaaaagcttttcagaaactcatttgtgtgcctcttggtactgatgat
gatgacaagtatattgctccaaatgatgaccctcatggaaacatggtgattgaggctata
aagaacgataagcttcaccaaatggaaagggagaggaaagcactagcagaaaaatacatt
atgacctcagccaagcttatcgctccagccattgagtcgtcatttgcagctgggtttgac
tggtgtgtggacatggtgaaaggttcacaatacgtggagcttgccaatgacttggagatc
aataaagctattacatacttaagacagagggacttcagacaggcagttgagacactaaag
atgtttgagaagaaggacagtcgagtaaaaagcgctgctgccactaatctttcttttctg
tactttttggaaaaggattatgatcaggcggaccgctatgctgaacttgccatgagtgct
gaccgctacaaccccgctgccctcgtaaacaaaggcaacacagaatttgtgaaggaggac
tatgagaaagcagcagagttttataaggaggctcttcataatgactcatcctgcactgaa
gctctctataacttaggtttgagctataagaggctgggtagactggaggaagccctggac
tgcttcctcaaactgcacgctatcctcagaaacagtgctcaggtcatgtaccagctggct
aatctatatgagatgttggaggaccctcatcaggccattgaatggctgatgcagctcaca
agtgtgacccccacagatgcacaggtgttggcaaaactgggagacctttatgataatgaa
ggagacaagtctcaggccttccagtactattatgagtcatataggtattttccctcaaac
attagtgtcattgaatggctgggagcatattacattgacacccagttctgtgaaaaagct
attcagtactttgagagagctaccctcattcaaccgacacaggtgaagtggcagctgatg
gtggctagctgttacaggagaagtgggaattatcagaaggcacttgagacctacaaggac
attcatcggaaatttcctgaaaatgttgaatgtctacgcttcctagtcaggctgtgcaca
gatatgggactaaaagaggtgcaggattatgccaccaaactcaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgagatctggcagggacagcagtgctcgaggccgcagg
gaaggcagtgctggcagtgggagcagctcaagccccatcaatacccctcctctgagagcc
agtgtttctcgctcagaagctaagtatagtcctgtgctggagcagggcagagacagtgga
cagagcaaccatggcaccagtgcaaagggtgagagaattagcgctaaactgaaaactctt
ccagggtccaatgagccatacgaggccagcactcagcaggaaatagatgcttcttatgtt
gatcctttggggcctcaaatgcagagaccaaaaactgcagcaaagaaacgcactgaggaa
gatgagtttgctgatgaagagctgggagatgacttactgcctgagtga
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