Carassius auratus (goldfish): 113053638
Help
Entry
113053638 CDS
T07313
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113053638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113053638
09142 Cell motility
04820 Cytoskeleton in muscle cells
113053638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113053638
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113053638
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113053638
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113053638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113053638
NCBI-ProteinID:
XP_026074596
Ensembl:
ENSCARG00000016671
UniProt:
A0A6P6KT14
LinkDB
All DBs
Position
34:complement(25739022..25822463)
Genome browser
AA seq
1666 aa
AA seq
DB search
MEGENHLQHWNTFRCFLLCFAVIILTTEVNAGVKKSGGACGGRDCSGGCQCYPEKGARGL
PGPLGPQGPRGPNGRPGDPGLQGPKGEKGDPGRGGLMGPKGSVGMQGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGETGTPGIPGHNGEPGISGRPGMKGEKGDPLDMWVYMERFR
GDPGPPGSLGFIGPTGNPGYRGLPGLQGPWGPTGIKGVKGQKGESTKMLKGVKGDMGENG
EPGPPGPFSQTRPVPTEWQGKKGLKGYKGEQGDTGYLSTKGETGVSGLPGQRGNPGLNGS
PGSKGDDGLPGFPGNNGRKGDRGEPGELIGPFGVGPPGPPGERGPIGEYGPKGPKGLPGP
PGPPPSEQQPVDLLGPVGPHGPKGAKGEAGEPGNPAIHPGPPGPDGNPGVQGPPGPKGSL
EEFFKGAPGPRGRPGNAGKKGPKGDHGLCECTVQSTPGPAGPPGDAGDIGMVGEWGQHGD
QGDPGPRGVDGVPGFPGARGIPGPKGRKGELRSATQKGLPGDPGDPGANGFPGEEGRPGF
NGKDGEPGLQGSPGEGPVGEPGEKGYPGWPGPPGLIGPIGQPGQVHGATKGARGLPGDDG
QAGIDGKRGSPGAPGECSPQGGNQWHIPVECIGDPGPPGEIGKPGLPGFTGFPGLQGSKG
IQGLSGEPGAKGEKGEPGRGGPPGPGGFVGPRGDMGNPGSKGVEGTPGLSGKLGLDGAPG
QKGEHGEVLGASSGAPGDPGLPGQRGVIGPPGDPGPQGHPGMEGMPGMIGLKGESGPQGF
LGETGRPGPPGTFGFPGQPGQVGPPGPAGKTGEPGPSGERGVQGDPGLPGPRGVKGVTGE
PGNAGLTGNVGPPGDPGQQGAFGLGGFPGLKGSKGGQGMTGFPGRPGETGLKGFSGQKGA
KGDPGRQGAKGPPGLPGEKGERGLMGPPGEKPIIIIPPHMREVMKGAKGDHGKMGDPGFT
GPRGTKGLPGVPGEEGKDGHPGEPSETKGTRGLPGVKGLPGPKGMPGLSGIRGIEGFPGL
PGRPGDKGTSGAYGRIGESGIKGIKGDLGPTISLPGSIGLRGETGFPGPLGEKGLTGQSG
DRGSPGFDGIEGMKGYPGEPGKVGPPGSDGLQGFPGTQGQKGWSGVPGQAGTPGTQGQPG
QKGFPGLKGIFGLNGLKGQKGIKGAPGSDNWGPSGEPGAKGERGETGIPSTEAGVPGGVG
FKGFTGEPGNKGESGHPGVPGPQGPQGFSDIKGVRGDYGFPGPKGHPGSPGPRGIPGDPS
PFGAKGENGNPGNVGLTGEKGVQGDWGEKGPSGEPGVSGRKGEKGETGMMGYPGRHGFTG
DRGPVGPKGDTGPPGFPGVPGAKGLPPVPQKLQGERGPPGPMGIQGPQGRRGNPGLAGLP
GDPGVLGPNGEKGMPGLPGIPGNPGFRGEPGQMGHYGLQGEEGTRGSPGLPGPIGTPGRS
VNVGYLLVKHSQSENIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFNTMP
FLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAIHSQ
DMEIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAKGTC
HYFANKQSFWLTSIDQTFQSSPSSETLKAGQLRSRISRCQVCMKNL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaccatctacagcactggaacacattcagatgttttctgttgtgcttt
gcagtcattatacttacaactgaggtcaatgcaggagtgaagaagagcggtggagcatgt
gggggcagagactgcagcggcgggtgtcagtgttatcctgagaagggtgcgaggggattg
cctggaccccttggtccccagggtcccagaggccctaatgggcgaccgggagaccctggt
ctacagggccctaaaggagagaagggggaccctggcagaggaggccttatgggtccaaaa
ggaagtgtgggaatgcaaggtgttccagggtttaatggagcagatggtgttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaatggaaccagggga
gaaacaggaacgccaggcattccgggacataatggcgaacctggaatatcaggtcggcca
ggaatgaagggggagaagggtgaccctttggatatgtgggtttatatggaaagattcagg
ggagatccaggaccaccaggttctctaggatttattggaccaactggtaacccagggtac
agaggactgccaggattgcaaggtccttggggtcctactggcatcaagggtgttaaagga
caaaagggtgaaagcactaaaatgttaaaaggagtcaaaggagacatgggggagaatgga
gagccaggcccaccaggacctttctcacaaacccgtccagtccctacagaatggcagggt
aaaaaaggcttgaaaggttataaaggagagcaaggagatacgggatatttatctacaaaa
ggagagactggtgtgtcagggttaccaggacaacggggaaacccaggactaaatggctcg
ccaggatctaagggtgacgatggacttccgggtttcccaggaaataatggtcgcaaggga
gatagaggagaacccggagagctgattggtccttttggagtgggtcctccaggacctccg
ggagagcgtggcccaattggagagtatggtcctaagggtcctaaaggactgccgggtccc
ccaggaccccctccctctgagcaacaaccagtggatttgttgggtccagtgggaccacat
ggaccaaagggagccaaaggggaagctggagaacctggtaatcctgccattcatcccggt
ccacctggccctgatgggaatcctggagttcaaggaccacccggacccaagggatcattg
gaagaattcttcaaaggagcaccaggaccacgtggacgtccaggaaatgcaggaaaaaag
ggaccaaagggtgaccatggtctgtgcgaatgcactgtacaatccacacctggtcctgcg
ggtcctcctggtgatgctggggacattggcatggtaggagagtggggtcagcatggtgat
cagggagacccgggacccagaggcgtggatggtgtgcctggtttccctggtgcaagagga
atacctggacccaaaggcagaaaaggagagctgagatccgctacacagaaaggactgcct
ggtgaccccggggatccaggtgctaatgggttcccaggagaggaaggaaggcctggattt
aatggcaaagatggtgaaccaggtcttcaaggatctcctggagaaggtcctgtaggtgaa
cctggagagaagggatacccaggttggccaggtcctccaggtctaataggtccgatagga
caacctggtcaagttcatggagcaactaaaggtgcaaggggtcttcctggagatgatgga
caagctggtatcgatggaaaacgagggtcacctggtgctccaggagaatgcagcccacaa
ggaggaaatcagtggcatattccagtggaatgtattggagatcccgggccacctggagag
atagggaagcctggacttccaggattcactggatttcctggactgcaaggttctaaaggc
atacaaggtctttctggagaacctggggccaaaggagagaaaggtgaaccaggaagagga
ggcccgcctgggccaggaggttttgttggacctcggggtgacatgggaaatcctggctcc
aaaggtgtggaaggaactccaggtctttctggtaaactaggtttggacggtgctccaggg
cagaagggtgagcatggtgaagttttaggagcatcttctggagcccctggagacccagga
ctaccaggacagaggggtgtcattggtcccccaggagacccaggacctcaaggacacccg
ggtatggagggaatgccgggaatgattggccttaagggtgaaagtggccctcaaggtttt
ctaggagagacaggaagacctggaccgccaggaacatttggctttcctgggcagcctggt
caagtaggaccacccggaccagctggaaaaactggagaaccaggtccaagtggagaaagg
ggagttcagggagacccaggccttcctgggcccagaggagtaaagggtgtcactggagaa
ccaggaaatgcgggtcttacaggaaatgtcgggcccccaggagatccaggacaacagggg
gcatttggtttaggtggttttccagggttaaaaggttccaaaggtggtcagggcatgacg
ggtttccctggaaggcctggtgagacaggtctgaagggcttttcgggacagaaaggagca
aaaggtgatccaggaagacaaggtgcaaaaggacctcctggccttccaggtgaaaaaggt
gagagagggttgatgggacctccaggtgaaaagccaatcataattataccaccacatatg
agagaggtcatgaagggagctaaaggtgaccacggaaaaatgggagatcctggcttcact
ggtcccagaggtacaaaaggtctaccaggtgttccaggagaggagggtaaagatggacat
ccaggtgagcccagtgaaacaaaaggtactcgaggtcttcccggagtaaaaggacttcca
gggcctaagggaatgccagggctttcaggaattcgtggaatcgagggttttcctggattg
cctggacgcccgggtgacaagggcacgtctggagcttacggacggattggagaatctgga
atcaagggaataaaaggtgacctgggtcctaccatcagtcttcctggatcaattggactg
agaggagaaactgggtttcctggacctttaggtgaaaagggactcacaggtcagtctgga
gacagaggaagtcctggtttcgatggcattgaagggatgaaaggctatccaggagaacct
ggaaaagttggaccgccaggttctgatggcctacaaggtttcccaggaacccagggtcag
aagggctggtctggtgtgcctggacaagcaggaacccctgggacccaaggccaaccagga
caaaaaggatttcctggtcttaaaggcatttttggattgaatggcctgaaaggtcaaaag
gggatcaagggtgctccaggttctgacaactggggtccttctggtgagcccggagcaaaa
ggagagagaggagagaccggcatccccagcacagaagctggtgtccccggaggggtggga
ttcaagggtttcactggagagccaggtaataagggtgaatctgggcatcctggtgtaccg
ggtcctcagggtcctcaaggattctctgatataaaaggagtgcgaggtgactatggcttt
ccaggcccaaaaggacatccaggttctcctggtcccagagggatcccaggtgacccatct
ccattcggagcaaaaggagagaatggaaatccaggtaatgtcggattgactggagaaaaa
ggagtccagggggactggggagaaaaaggaccgtcaggggaacctggagtgtcgggaaga
aaaggtgaaaaaggagaaacaggaatgatgggatatccaggaaggcatggttttacaggt
gacaggggccctgtgggacccaaaggagacactggacccccaggttttcctggcgttcct
ggtgctaaaggacttccaccagttccacagaaactacaaggggagagaggaccacctggc
ccaatgggtattcaaggaccacagggacggcgtggaaacccaggcctagctgggcttcct
ggtgatccaggtgttttgggtccaaatggagaaaaaggcatgccaggtctccctggaata
ccaggaaatccaggcttccgtggagaacctggacaaatgggccactatggtctacaaggc
gaagaagggacccgagggagccctggtttacccggtcctattggaacgcccggccgcagt
gttaatgttggctacctgctggtgaaacacagtcagtctgagaacatccccatgtgccct
gtgggtatgtccaaattatgggatggttacagtcttctgtactttgagggacaggagaag
gcccacaaccaagacctgggtctagccggctcctgtctcccccgttttaacaccatgccc
ttcctgtactgcaatcctggagacgtatgctactatgccagccgcaatgacaaatcctac
tggctgtccaccaccgcaccaattcccatgatgcccgtggaggaggccgaaataaaacca
tacatcagccgctgctcggtgtgtgaagctccatcggtggccatcgccatacacagtcaa
gatatggaaatcccacattgcccagcaggctggagaagtctctggattggctactccttc
cttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtctccgggctcc
tgtctagaagatttccgcaccactcccttcatcgagtgtaacggggccaaggggacgtgc
cactacttcgccaacaagcaaagcttctggttgacgtctatcgatcagaccttccagagt
tccccttcctctgagacactgaaagccggtcagctccggtcacgcatcagccgctgccaa
gtgtgtatgaagaacctgtga
DBGET
integrated database retrieval system