KEGG   Carassius auratus (goldfish): 113053638
Entry
113053638         CDS       T07313                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113053638
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113053638
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113053638
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113053638
   00536 Glycosaminoglycan binding proteins [BR:caua00536]
    113053638
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   113053638
Glycosaminoglycan binding proteins [BR:caua00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113053638
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 113053638
NCBI-ProteinID: XP_026074596
Ensembl: ENSCARG00000016671
UniProt: A0A6P6KT14
LinkDB
Position
34:complement(25739022..25822463)
AA seq 1666 aa
MEGENHLQHWNTFRCFLLCFAVIILTTEVNAGVKKSGGACGGRDCSGGCQCYPEKGARGL
PGPLGPQGPRGPNGRPGDPGLQGPKGEKGDPGRGGLMGPKGSVGMQGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGETGTPGIPGHNGEPGISGRPGMKGEKGDPLDMWVYMERFR
GDPGPPGSLGFIGPTGNPGYRGLPGLQGPWGPTGIKGVKGQKGESTKMLKGVKGDMGENG
EPGPPGPFSQTRPVPTEWQGKKGLKGYKGEQGDTGYLSTKGETGVSGLPGQRGNPGLNGS
PGSKGDDGLPGFPGNNGRKGDRGEPGELIGPFGVGPPGPPGERGPIGEYGPKGPKGLPGP
PGPPPSEQQPVDLLGPVGPHGPKGAKGEAGEPGNPAIHPGPPGPDGNPGVQGPPGPKGSL
EEFFKGAPGPRGRPGNAGKKGPKGDHGLCECTVQSTPGPAGPPGDAGDIGMVGEWGQHGD
QGDPGPRGVDGVPGFPGARGIPGPKGRKGELRSATQKGLPGDPGDPGANGFPGEEGRPGF
NGKDGEPGLQGSPGEGPVGEPGEKGYPGWPGPPGLIGPIGQPGQVHGATKGARGLPGDDG
QAGIDGKRGSPGAPGECSPQGGNQWHIPVECIGDPGPPGEIGKPGLPGFTGFPGLQGSKG
IQGLSGEPGAKGEKGEPGRGGPPGPGGFVGPRGDMGNPGSKGVEGTPGLSGKLGLDGAPG
QKGEHGEVLGASSGAPGDPGLPGQRGVIGPPGDPGPQGHPGMEGMPGMIGLKGESGPQGF
LGETGRPGPPGTFGFPGQPGQVGPPGPAGKTGEPGPSGERGVQGDPGLPGPRGVKGVTGE
PGNAGLTGNVGPPGDPGQQGAFGLGGFPGLKGSKGGQGMTGFPGRPGETGLKGFSGQKGA
KGDPGRQGAKGPPGLPGEKGERGLMGPPGEKPIIIIPPHMREVMKGAKGDHGKMGDPGFT
GPRGTKGLPGVPGEEGKDGHPGEPSETKGTRGLPGVKGLPGPKGMPGLSGIRGIEGFPGL
PGRPGDKGTSGAYGRIGESGIKGIKGDLGPTISLPGSIGLRGETGFPGPLGEKGLTGQSG
DRGSPGFDGIEGMKGYPGEPGKVGPPGSDGLQGFPGTQGQKGWSGVPGQAGTPGTQGQPG
QKGFPGLKGIFGLNGLKGQKGIKGAPGSDNWGPSGEPGAKGERGETGIPSTEAGVPGGVG
FKGFTGEPGNKGESGHPGVPGPQGPQGFSDIKGVRGDYGFPGPKGHPGSPGPRGIPGDPS
PFGAKGENGNPGNVGLTGEKGVQGDWGEKGPSGEPGVSGRKGEKGETGMMGYPGRHGFTG
DRGPVGPKGDTGPPGFPGVPGAKGLPPVPQKLQGERGPPGPMGIQGPQGRRGNPGLAGLP
GDPGVLGPNGEKGMPGLPGIPGNPGFRGEPGQMGHYGLQGEEGTRGSPGLPGPIGTPGRS
VNVGYLLVKHSQSENIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFNTMP
FLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAIHSQ
DMEIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAKGTC
HYFANKQSFWLTSIDQTFQSSPSSETLKAGQLRSRISRCQVCMKNL
NT seq 5001 nt   +upstreamnt  +downstreamnt
atggagggtgagaaccatctacagcactggaacacattcagatgttttctgttgtgcttt
gcagtcattatacttacaactgaggtcaatgcaggagtgaagaagagcggtggagcatgt
gggggcagagactgcagcggcgggtgtcagtgttatcctgagaagggtgcgaggggattg
cctggaccccttggtccccagggtcccagaggccctaatgggcgaccgggagaccctggt
ctacagggccctaaaggagagaagggggaccctggcagaggaggccttatgggtccaaaa
ggaagtgtgggaatgcaaggtgttccagggtttaatggagcagatggtgttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaatggaaccagggga
gaaacaggaacgccaggcattccgggacataatggcgaacctggaatatcaggtcggcca
ggaatgaagggggagaagggtgaccctttggatatgtgggtttatatggaaagattcagg
ggagatccaggaccaccaggttctctaggatttattggaccaactggtaacccagggtac
agaggactgccaggattgcaaggtccttggggtcctactggcatcaagggtgttaaagga
caaaagggtgaaagcactaaaatgttaaaaggagtcaaaggagacatgggggagaatgga
gagccaggcccaccaggacctttctcacaaacccgtccagtccctacagaatggcagggt
aaaaaaggcttgaaaggttataaaggagagcaaggagatacgggatatttatctacaaaa
ggagagactggtgtgtcagggttaccaggacaacggggaaacccaggactaaatggctcg
ccaggatctaagggtgacgatggacttccgggtttcccaggaaataatggtcgcaaggga
gatagaggagaacccggagagctgattggtccttttggagtgggtcctccaggacctccg
ggagagcgtggcccaattggagagtatggtcctaagggtcctaaaggactgccgggtccc
ccaggaccccctccctctgagcaacaaccagtggatttgttgggtccagtgggaccacat
ggaccaaagggagccaaaggggaagctggagaacctggtaatcctgccattcatcccggt
ccacctggccctgatgggaatcctggagttcaaggaccacccggacccaagggatcattg
gaagaattcttcaaaggagcaccaggaccacgtggacgtccaggaaatgcaggaaaaaag
ggaccaaagggtgaccatggtctgtgcgaatgcactgtacaatccacacctggtcctgcg
ggtcctcctggtgatgctggggacattggcatggtaggagagtggggtcagcatggtgat
cagggagacccgggacccagaggcgtggatggtgtgcctggtttccctggtgcaagagga
atacctggacccaaaggcagaaaaggagagctgagatccgctacacagaaaggactgcct
ggtgaccccggggatccaggtgctaatgggttcccaggagaggaaggaaggcctggattt
aatggcaaagatggtgaaccaggtcttcaaggatctcctggagaaggtcctgtaggtgaa
cctggagagaagggatacccaggttggccaggtcctccaggtctaataggtccgatagga
caacctggtcaagttcatggagcaactaaaggtgcaaggggtcttcctggagatgatgga
caagctggtatcgatggaaaacgagggtcacctggtgctccaggagaatgcagcccacaa
ggaggaaatcagtggcatattccagtggaatgtattggagatcccgggccacctggagag
atagggaagcctggacttccaggattcactggatttcctggactgcaaggttctaaaggc
atacaaggtctttctggagaacctggggccaaaggagagaaaggtgaaccaggaagagga
ggcccgcctgggccaggaggttttgttggacctcggggtgacatgggaaatcctggctcc
aaaggtgtggaaggaactccaggtctttctggtaaactaggtttggacggtgctccaggg
cagaagggtgagcatggtgaagttttaggagcatcttctggagcccctggagacccagga
ctaccaggacagaggggtgtcattggtcccccaggagacccaggacctcaaggacacccg
ggtatggagggaatgccgggaatgattggccttaagggtgaaagtggccctcaaggtttt
ctaggagagacaggaagacctggaccgccaggaacatttggctttcctgggcagcctggt
caagtaggaccacccggaccagctggaaaaactggagaaccaggtccaagtggagaaagg
ggagttcagggagacccaggccttcctgggcccagaggagtaaagggtgtcactggagaa
ccaggaaatgcgggtcttacaggaaatgtcgggcccccaggagatccaggacaacagggg
gcatttggtttaggtggttttccagggttaaaaggttccaaaggtggtcagggcatgacg
ggtttccctggaaggcctggtgagacaggtctgaagggcttttcgggacagaaaggagca
aaaggtgatccaggaagacaaggtgcaaaaggacctcctggccttccaggtgaaaaaggt
gagagagggttgatgggacctccaggtgaaaagccaatcataattataccaccacatatg
agagaggtcatgaagggagctaaaggtgaccacggaaaaatgggagatcctggcttcact
ggtcccagaggtacaaaaggtctaccaggtgttccaggagaggagggtaaagatggacat
ccaggtgagcccagtgaaacaaaaggtactcgaggtcttcccggagtaaaaggacttcca
gggcctaagggaatgccagggctttcaggaattcgtggaatcgagggttttcctggattg
cctggacgcccgggtgacaagggcacgtctggagcttacggacggattggagaatctgga
atcaagggaataaaaggtgacctgggtcctaccatcagtcttcctggatcaattggactg
agaggagaaactgggtttcctggacctttaggtgaaaagggactcacaggtcagtctgga
gacagaggaagtcctggtttcgatggcattgaagggatgaaaggctatccaggagaacct
ggaaaagttggaccgccaggttctgatggcctacaaggtttcccaggaacccagggtcag
aagggctggtctggtgtgcctggacaagcaggaacccctgggacccaaggccaaccagga
caaaaaggatttcctggtcttaaaggcatttttggattgaatggcctgaaaggtcaaaag
gggatcaagggtgctccaggttctgacaactggggtccttctggtgagcccggagcaaaa
ggagagagaggagagaccggcatccccagcacagaagctggtgtccccggaggggtggga
ttcaagggtttcactggagagccaggtaataagggtgaatctgggcatcctggtgtaccg
ggtcctcagggtcctcaaggattctctgatataaaaggagtgcgaggtgactatggcttt
ccaggcccaaaaggacatccaggttctcctggtcccagagggatcccaggtgacccatct
ccattcggagcaaaaggagagaatggaaatccaggtaatgtcggattgactggagaaaaa
ggagtccagggggactggggagaaaaaggaccgtcaggggaacctggagtgtcgggaaga
aaaggtgaaaaaggagaaacaggaatgatgggatatccaggaaggcatggttttacaggt
gacaggggccctgtgggacccaaaggagacactggacccccaggttttcctggcgttcct
ggtgctaaaggacttccaccagttccacagaaactacaaggggagagaggaccacctggc
ccaatgggtattcaaggaccacagggacggcgtggaaacccaggcctagctgggcttcct
ggtgatccaggtgttttgggtccaaatggagaaaaaggcatgccaggtctccctggaata
ccaggaaatccaggcttccgtggagaacctggacaaatgggccactatggtctacaaggc
gaagaagggacccgagggagccctggtttacccggtcctattggaacgcccggccgcagt
gttaatgttggctacctgctggtgaaacacagtcagtctgagaacatccccatgtgccct
gtgggtatgtccaaattatgggatggttacagtcttctgtactttgagggacaggagaag
gcccacaaccaagacctgggtctagccggctcctgtctcccccgttttaacaccatgccc
ttcctgtactgcaatcctggagacgtatgctactatgccagccgcaatgacaaatcctac
tggctgtccaccaccgcaccaattcccatgatgcccgtggaggaggccgaaataaaacca
tacatcagccgctgctcggtgtgtgaagctccatcggtggccatcgccatacacagtcaa
gatatggaaatcccacattgcccagcaggctggagaagtctctggattggctactccttc
cttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtctccgggctcc
tgtctagaagatttccgcaccactcccttcatcgagtgtaacggggccaaggggacgtgc
cactacttcgccaacaagcaaagcttctggttgacgtctatcgatcagaccttccagagt
tccccttcctctgagacactgaaagccggtcagctccggtcacgcatcagccgctgccaa
gtgtgtatgaagaacctgtga

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