Carassius auratus (goldfish): 113053638
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Entry
113053638 CDS
T07313
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04382
Cornified envelope formation
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04518
Integrin signaling
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113053638
04518 Integrin signaling
113053638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113053638
09142 Cell motility
04820 Cytoskeleton in muscle cells
113053638
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113053638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113053638
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113053638
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113053638
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113053638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113053638
NCBI-ProteinID:
XP_026074596
Ensembl:
ENSCARG00000016671
UniProt:
A0A6P6KT14
LinkDB
All DBs
Position
34
Genome browser
AA seq
1666 aa
AA seq
DB search
MEGENHLQHWNTFRCFLLCFAVIILTTEVNAGVKKSGGACGGRDCSGGCQCYPEKGARGL
PGPLGPQGPRGPNGRPGDPGLQGPKGEKGDPGRGGLMGPKGSVGMQGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGETGTPGIPGHNGEPGISGRPGMKGEKGDPLDMWVYMERFR
GDPGPPGSLGFIGPTGNPGYRGLPGLQGPWGPTGIKGVKGQKGESTKMLKGVKGDMGENG
EPGPPGPFSQTRPVPTEWQGKKGLKGYKGEQGDTGYLSTKGETGVSGLPGQRGNPGLNGS
PGSKGDDGLPGFPGNNGRKGDRGEPGELIGPFGVGPPGPPGERGPIGEYGPKGPKGLPGP
PGPPPSEQQPVDLLGPVGPHGPKGAKGEAGEPGNPAIHPGPPGPDGNPGVQGPPGPKGSL
EEFFKGAPGPRGRPGNAGKKGPKGDHGLCECTVQSTPGPAGPPGDAGDIGMVGEWGQHGD
QGDPGPRGVDGVPGFPGARGIPGPKGRKGELRSATQKGLPGDPGDPGANGFPGEEGRPGF
NGKDGEPGLQGSPGEGPVGEPGEKGYPGWPGPPGLIGPIGQPGQVHGATKGARGLPGDDG
QAGIDGKRGSPGAPGECSPQGGNQWHIPVECIGDPGPPGEIGKPGLPGFTGFPGLQGSKG
IQGLSGEPGAKGEKGEPGRGGPPGPGGFVGPRGDMGNPGSKGVEGTPGLSGKLGLDGAPG
QKGEHGEVLGASSGAPGDPGLPGQRGVIGPPGDPGPQGHPGMEGMPGMIGLKGESGPQGF
LGETGRPGPPGTFGFPGQPGQVGPPGPAGKTGEPGPSGERGVQGDPGLPGPRGVKGVTGE
PGNAGLTGNVGPPGDPGQQGAFGLGGFPGLKGSKGGQGMTGFPGRPGETGLKGFSGQKGA
KGDPGRQGAKGPPGLPGEKGERGLMGPPGEKPIIIIPPHMREVMKGAKGDHGKMGDPGFT
GPRGTKGLPGVPGEEGKDGHPGEPSETKGTRGLPGVKGLPGPKGMPGLSGIRGIEGFPGL
PGRPGDKGTSGAYGRIGESGIKGIKGDLGPTISLPGSIGLRGETGFPGPLGEKGLTGQSG
DRGSPGFDGIEGMKGYPGEPGKVGPPGSDGLQGFPGTQGQKGWSGVPGQAGTPGTQGQPG
QKGFPGLKGIFGLNGLKGQKGIKGAPGSDNWGPSGEPGAKGERGETGIPSTEAGVPGGVG
FKGFTGEPGNKGESGHPGVPGPQGPQGFSDIKGVRGDYGFPGPKGHPGSPGPRGIPGDPS
PFGAKGENGNPGNVGLTGEKGVQGDWGEKGPSGEPGVSGRKGEKGETGMMGYPGRHGFTG
DRGPVGPKGDTGPPGFPGVPGAKGLPPVPQKLQGERGPPGPMGIQGPQGRRGNPGLAGLP
GDPGVLGPNGEKGMPGLPGIPGNPGFRGEPGQMGHYGLQGEEGTRGSPGLPGPIGTPGRS
VNVGYLLVKHSQSENIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFNTMP
FLYCNPGDVCYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAIHSQ
DMEIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAKGTC
HYFANKQSFWLTSIDQTFQSSPSSETLKAGQLRSRISRCQVCMKNL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaccatctacagcactggaacacattcagatgttttctgttgtgcttt
gcagtcattatacttacaactgaggtcaatgcaggagtgaagaagagcggtggagcatgt
gggggcagagactgcagcggcgggtgtcagtgttatcctgagaagggtgcgaggggattg
cctggaccccttggtccccagggtcccagaggccctaatgggcgaccgggagaccctggt
ctacagggccctaaaggagagaagggggaccctggcagaggaggccttatgggtccaaaa
ggaagtgtgggaatgcaaggtgttccagggtttaatggagcagatggtgttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaatggaaccagggga
gaaacaggaacgccaggcattccgggacataatggcgaacctggaatatcaggtcggcca
ggaatgaagggggagaagggtgaccctttggatatgtgggtttatatggaaagattcagg
ggagatccaggaccaccaggttctctaggatttattggaccaactggtaacccagggtac
agaggactgccaggattgcaaggtccttggggtcctactggcatcaagggtgttaaagga
caaaagggtgaaagcactaaaatgttaaaaggagtcaaaggagacatgggggagaatgga
gagccaggcccaccaggacctttctcacaaacccgtccagtccctacagaatggcagggt
aaaaaaggcttgaaaggttataaaggagagcaaggagatacgggatatttatctacaaaa
ggagagactggtgtgtcagggttaccaggacaacggggaaacccaggactaaatggctcg
ccaggatctaagggtgacgatggacttccgggtttcccaggaaataatggtcgcaaggga
gatagaggagaacccggagagctgattggtccttttggagtgggtcctccaggacctccg
ggagagcgtggcccaattggagagtatggtcctaagggtcctaaaggactgccgggtccc
ccaggaccccctccctctgagcaacaaccagtggatttgttgggtccagtgggaccacat
ggaccaaagggagccaaaggggaagctggagaacctggtaatcctgccattcatcccggt
ccacctggccctgatgggaatcctggagttcaaggaccacccggacccaagggatcattg
gaagaattcttcaaaggagcaccaggaccacgtggacgtccaggaaatgcaggaaaaaag
ggaccaaagggtgaccatggtctgtgcgaatgcactgtacaatccacacctggtcctgcg
ggtcctcctggtgatgctggggacattggcatggtaggagagtggggtcagcatggtgat
cagggagacccgggacccagaggcgtggatggtgtgcctggtttccctggtgcaagagga
atacctggacccaaaggcagaaaaggagagctgagatccgctacacagaaaggactgcct
ggtgaccccggggatccaggtgctaatgggttcccaggagaggaaggaaggcctggattt
aatggcaaagatggtgaaccaggtcttcaaggatctcctggagaaggtcctgtaggtgaa
cctggagagaagggatacccaggttggccaggtcctccaggtctaataggtccgatagga
caacctggtcaagttcatggagcaactaaaggtgcaaggggtcttcctggagatgatgga
caagctggtatcgatggaaaacgagggtcacctggtgctccaggagaatgcagcccacaa
ggaggaaatcagtggcatattccagtggaatgtattggagatcccgggccacctggagag
atagggaagcctggacttccaggattcactggatttcctggactgcaaggttctaaaggc
atacaaggtctttctggagaacctggggccaaaggagagaaaggtgaaccaggaagagga
ggcccgcctgggccaggaggttttgttggacctcggggtgacatgggaaatcctggctcc
aaaggtgtggaaggaactccaggtctttctggtaaactaggtttggacggtgctccaggg
cagaagggtgagcatggtgaagttttaggagcatcttctggagcccctggagacccagga
ctaccaggacagaggggtgtcattggtcccccaggagacccaggacctcaaggacacccg
ggtatggagggaatgccgggaatgattggccttaagggtgaaagtggccctcaaggtttt
ctaggagagacaggaagacctggaccgccaggaacatttggctttcctgggcagcctggt
caagtaggaccacccggaccagctggaaaaactggagaaccaggtccaagtggagaaagg
ggagttcagggagacccaggccttcctgggcccagaggagtaaagggtgtcactggagaa
ccaggaaatgcgggtcttacaggaaatgtcgggcccccaggagatccaggacaacagggg
gcatttggtttaggtggttttccagggttaaaaggttccaaaggtggtcagggcatgacg
ggtttccctggaaggcctggtgagacaggtctgaagggcttttcgggacagaaaggagca
aaaggtgatccaggaagacaaggtgcaaaaggacctcctggccttccaggtgaaaaaggt
gagagagggttgatgggacctccaggtgaaaagccaatcataattataccaccacatatg
agagaggtcatgaagggagctaaaggtgaccacggaaaaatgggagatcctggcttcact
ggtcccagaggtacaaaaggtctaccaggtgttccaggagaggagggtaaagatggacat
ccaggtgagcccagtgaaacaaaaggtactcgaggtcttcccggagtaaaaggacttcca
gggcctaagggaatgccagggctttcaggaattcgtggaatcgagggttttcctggattg
cctggacgcccgggtgacaagggcacgtctggagcttacggacggattggagaatctgga
atcaagggaataaaaggtgacctgggtcctaccatcagtcttcctggatcaattggactg
agaggagaaactgggtttcctggacctttaggtgaaaagggactcacaggtcagtctgga
gacagaggaagtcctggtttcgatggcattgaagggatgaaaggctatccaggagaacct
ggaaaagttggaccgccaggttctgatggcctacaaggtttcccaggaacccagggtcag
aagggctggtctggtgtgcctggacaagcaggaacccctgggacccaaggccaaccagga
caaaaaggatttcctggtcttaaaggcatttttggattgaatggcctgaaaggtcaaaag
gggatcaagggtgctccaggttctgacaactggggtccttctggtgagcccggagcaaaa
ggagagagaggagagaccggcatccccagcacagaagctggtgtccccggaggggtggga
ttcaagggtttcactggagagccaggtaataagggtgaatctgggcatcctggtgtaccg
ggtcctcagggtcctcaaggattctctgatataaaaggagtgcgaggtgactatggcttt
ccaggcccaaaaggacatccaggttctcctggtcccagagggatcccaggtgacccatct
ccattcggagcaaaaggagagaatggaaatccaggtaatgtcggattgactggagaaaaa
ggagtccagggggactggggagaaaaaggaccgtcaggggaacctggagtgtcgggaaga
aaaggtgaaaaaggagaaacaggaatgatgggatatccaggaaggcatggttttacaggt
gacaggggccctgtgggacccaaaggagacactggacccccaggttttcctggcgttcct
ggtgctaaaggacttccaccagttccacagaaactacaaggggagagaggaccacctggc
ccaatgggtattcaaggaccacagggacggcgtggaaacccaggcctagctgggcttcct
ggtgatccaggtgttttgggtccaaatggagaaaaaggcatgccaggtctccctggaata
ccaggaaatccaggcttccgtggagaacctggacaaatgggccactatggtctacaaggc
gaagaagggacccgagggagccctggtttacccggtcctattggaacgcccggccgcagt
gttaatgttggctacctgctggtgaaacacagtcagtctgagaacatccccatgtgccct
gtgggtatgtccaaattatgggatggttacagtcttctgtactttgagggacaggagaag
gcccacaaccaagacctgggtctagccggctcctgtctcccccgttttaacaccatgccc
ttcctgtactgcaatcctggagacgtatgctactatgccagccgcaatgacaaatcctac
tggctgtccaccaccgcaccaattcccatgatgcccgtggaggaggccgaaataaaacca
tacatcagccgctgctcggtgtgtgaagctccatcggtggccatcgccatacacagtcaa
gatatggaaatcccacattgcccagcaggctggagaagtctctggattggctactccttc
cttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtctccgggctcc
tgtctagaagatttccgcaccactcccttcatcgagtgtaacggggccaaggggacgtgc
cactacttcgccaacaagcaaagcttctggttgacgtctatcgatcagaccttccagagt
tccccttcctctgagacactgaaagccggtcagctccggtcacgcatcagccgctgccaa
gtgtgtatgaagaacctgtga
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