Carassius auratus (goldfish): 113053806
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Entry
113053806 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113053806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113053806
04121 Ubiquitin system [BR:
caua04121
]
113053806
03036 Chromosome and associated proteins [BR:
caua03036
]
113053806
03400 DNA repair and recombination proteins [BR:
caua03400
]
113053806
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113053806
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113053806
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113053806
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113053806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
ASFV_L11L
Motif
Other DBs
NCBI-GeneID:
113053806
NCBI-ProteinID:
XP_026074841
UniProt:
A0A6P6KTU4
LinkDB
All DBs
Position
34:6396185..6414250
Genome browser
AA seq
686 aa
AA seq
DB search
MITDTIQSDEKSIPKNKKNIKMWFSPKSRKVRCCIEKPVDSNKSNEVQGKKANPSSSSKD
QSVFNFTSSSQESGSSSPPQGKANQKIKKKRISQTSKQTGGGQRPKTWTQTMQECKRLKP
EVSNQQCNFGKVGTKDKKDGEDETVSSAVDNRRSSKIVSFHFPHSQSEETHKVVHQGXNQ
IPGPQKSILSNLEVEDSEKQNSANLSLPYYEAQVEPVTDILQESNENSPGLPHPSLARVL
KITREDQDSDDPQRMPKQPRTISRWKKRSSGEETASPEDHSQSLRTCRQSSEKNNVNPIT
PATPDLGRKSSSVRHKQASPAYMKRNHNGETPLHLAAIKGDVEEVRKLLAQGANPNLKDN
AGWTSLHEACSLGHLGVVEELLQQGALLNTPAYQNDSPLHDAVKNGQIAVVKLLVERGAS
QNVLNMFGLRPVDYALTPEMQEVLRMAPEAPHPITRTPSPPTSLTKAEGCVRETGPVVVI
GSQLTQIQQKLLAKAAQLFGGKQVKSFSSAVTHVVVPDVPIMPSTLTTLQGVLNGCWILR
FSRVSCSLQAVSWVSESEYEAGDGPPRARVNRGSLLPPLFDGCFFFMLGSFCKPPKDELI
QLVNEGGGQLLNRQPKPESDVTQTLNAATYHAQPGSDQVLCTQYILYDPQSSYKPQKVRV
GKVWSAPSTWLLDCIAAFQLLPVPEH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgataccatacagtcagatgagaagtctatcccgaagaataagaagaacatc
aaaatgtggtttagcccaaagagtcgtaaagtacgctgttgcattgagaaacctgttgac
tcaaacaaatcaaatgaagtccagggaaagaaagccaatccatcatcttcttccaaagac
cagtccgtcttcaacttcacctcttcctcccaggagtctggctcatcctcccctccacag
gggaaggcaaatcagaaaataaagaaaaaaaggatcagccaaacctccaaacaaactggt
ggtggacaaaggccaaaaacatggactcagactatgcaagaatgtaagagactgaagcca
gaggtgagtaatcagcagtgcaactttggaaaagtaggtactaaagacaaaaaggatgga
gaggacgagacagtgagctctgcggttgacaacagaaggtccagtaagatagtttctttc
catttccctcacagccaatctgaggagacccataaggttgtccatcaaggatagaatcaa
attcctggtccccaaaaaagcatcctaagcaatttggaagttgaagactctgagaaacaa
aactctgccaatttgagtttaccatattatgaagcacaggttgagcctgtcactgatatc
ctacaagaatccaatgaaaacagtccagggcttcctcatccttctcttgccagagtgctt
aagataaccagagaggatcaggacagtgatgatccacagagaatgccaaaacaacccaga
acgatttcaagatggaagaagagatcatctggagaagaaactgcttcacctgaagaccac
tctcagagtctgagaacatgcagacagtccagtgagaagaacaatgtgaacccaatcaca
ccagctacccctgaccttgggaggaagtcttcaagtgtgagacacaaacaggcaagtccg
gcttacatgaagaggaaccacaacggagagacgccactgcacttagctgccataaagggt
gatgtggaagaggtccgtaagctccttgctcagggagccaaccccaacctgaaggacaat
gcaggctggacatcactgcatgaggcttgtagtctgggtcacctgggagtggtggaggaa
ctgcttcagcagggggcgctgttgaacaccccagcctatcagaacgactctccactccat
gatgccgtaaagaatgggcaaatagcagtggtcaagctcttggttgaacgaggcgcatcc
caaaatgtcctgaatatgtttggcctacggccggtggattatgcattgactccagaaatg
caggaggtcctaagaatggccccggaggcacctcatcctataacacggaccccgagccct
cccaccagcctcactaaggctgaaggctgtgtgcgagagactggtccagtggttgtgatt
ggcagtcagctgacgcagattcagcagaagctgcttgccaaagcagctcagctctttgga
gggaaacaagtaaagtccttttctagtgcagttacccatgtggttgtaccagatgttccc
atcatgccctctaccctgaccacactgcagggcgtactcaatggctgctggatcctccgt
ttcagcagggtgagttgtagccttcaggctgtcagctgggtcagcgagagcgagtacgag
gcaggtgatggccccccgcgtgcccgtgtgaacagaggcagcctgctgcctcccctcttt
gatggctgcttcttcttcatgctgggctccttctgcaagccacctaaagatgagcttatt
cagttagttaacgaaggaggaggacaacttctgaatcgccagcccaaacccgagagtgat
gtcacgcaaacccttaacgcggcaacataccatgcccagcctggttcagaccaggttctc
tgcacccagtatatcttgtatgatcctcagagctcctacaaaccccagaaggtccgggta
ggtaaggtttggtcggctccatctacatggcttctggactgtatagctgcctttcaactc
ctgccagtgcctgagcactag
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