Carassius auratus (goldfish): 113054112
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Entry
113054112 CDS
T07313
Name
(RefSeq) GATOR complex protein DEPDC5-like isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113054112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113054112
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
113054112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FAM104
Motif
Other DBs
NCBI-GeneID:
113054112
NCBI-ProteinID:
XP_026075219
Ensembl:
ENSCARG00000016029
UniProt:
A0A6P6KSF5
LinkDB
All DBs
Position
35:complement(5673812..5701035)
Genome browser
AA seq
1603 aa
AA seq
DB search
MTVTMKANRSYKLVVHKKGFGGSEDELMMNPKVFPHVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVELAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQ
MSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSLEEFPE
IQRVSVRQDHEGRYYEDFYRVVDQNERRDEWMSLLITIKKLFIQYPVLVRLKGADEFLCG
SNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQR
MIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQNSC
SCFTPRIKLAGKKAHAEKAKSNKEHSLGAPKNVENSLPLQVDYDAYDAQVFRLPGPSRSQ
RSTNFRSSRERESTSRKSWGSTDVGGGVVGISPPPRPTGLEEQRSLPSDDSLSHVSNILL
IPRPAQGQYEVSSSLGYTSCTRELLEKMVDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQ
RALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQVSEQRDPART
SAELLELAYHEATGSKRTVSRHAGENGLYITGVPDNVSGSPASSNSTGTPVNRSSFEDYS
SPDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLP
HTDLERRDDESPVMMAHQVFEEFICQRLMQGYQIIVHPNRKPQPAIAPPLSSSPLYSRAL
VSRRKPEEEESVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHADA
HFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVAD
GEGHWDVYGEGIGAGRDSLSGTGDWSLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKGL
MVTGSLSPCNPEPIAPPVGKKCTSALSALLELDQTQKSLEEQQLAAQHGGKSCGPLSDAA
SVALTTTYVDSPRKDAAFILDFIRSPRSSYTCHSQLPAEQVPANHIEGGLSDKGGNQPGE
RTSATSQATGDPTLGTGGETGSSGLSLSSSSTLMEILEAIKHPTTGVQLLPEQRGLPPNC
FVSAEVVHWLVSTVENVATQGIAVEIMQKMLDEGLIMHASGDAMRTFVYGFYLYRIVDKE
YEKASTTQLPPAGASVWSAAALEDLALFQRKWFEVAFVMEERRPCDLPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQTAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLS
AAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLRAQLFI
PLNIQCLLKEGCDSLFEGFEPETYWDRMQLFQEAILFRFGFVQDKFSASAFNFPSENKPQ
YIHVTGTVFLQLPYSKRKYSGGQRRRRNSANSSSQNLFGSEERVGYNWAYNTMLTKAWRT
GVLGDEKLADRLLRDFTDFCANKDNRLVTYWESCVEKMNASAP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaccatgaaggcaaacaggtcctacaaacttgtggtgcacaagaagggcttt
ggagggagcgaggatgagctgatgatgaatcctaaagtctttcctcacgttaaactgggg
gatattgttgagattgcacatccaaatgatgagtacagtcctctgctgctgcaggtcaag
agtttgaaagaagacctgcagaaagaaactatcagtgtagatcagacagtggctcaggcc
ttcaagcttcgcgcctaccaggacgtcatcatcaatattgtggacccaaaggacgtgact
ttggatctggtggagctcacctttaaagatcagtatattggacgaggagacatgtggaga
ctgaagaagagcttagtgagcacatgtgcgtatgtgacacagaaagtagagcttgctgga
atcagagcccaggccagtgaattgtgggtaaaaggagagaaggtcacttgtggctacatt
agtgaagatacaagggtggtgttccggtccacctctgcaatggtttatatattcattcag
atgagctgtgagatgtgggactttgatatttatggtgatctttactttgagaaagctgtt
aatggtttcctctcggatctgtttgccaaatggaaagagaagaattgcagccatgaggtt
acagtggtgctgttctctcgtaccttctactctgccaaatcactggaagagttcccagag
atccaaagagtgtcagttcgacaagaccatgagggacgctattatgaggatttctacagg
gtggtggaccagaatgaaaggcgtgatgagtggatgtctctacttatcactattaaaaag
ctcttcatacagtatcctgtgctggtccgtcttaaaggagctgatgaattcctgtgcggg
agcaattccacggctgctcaggggaattatctggaagctatcaacttgtctttcaatgtc
tttgataagcactacatcaaccgtaactttgaccgtacgggtcagatgtcagtggtcatt
actccaggagtgggtgtgttcgaggtggaccgcttgctcatgatcctcaccaaacagcga
atgattgacaacggcatcggtgtagatctggtatgcatgggagagcagcccctccacgct
gttccactcttcaagttacataaccgtacagtgcacggagactctagaattggtgatgac
tacaacctgccacactggatcaaccacagcttttacacatcaaagagccagaactcatgc
agctgttttacaccacggatcaagctggctggaaaaaaggctcatgctgagaaagctaaa
agcaacaaagaacattcccttggtgcaccaaaaaatgttgagaacagcctccctctccag
gtggactatgatgcatatgacgctcaggtcttcaggcttcctggaccttccagatcccag
aggtccaccaacttcaggtcgagtcgggagagggaatcaaccagcaggaaaagttggggc
tcgacggatgttggtggaggtgtagtgggcatctctccccctcccaggcctacaggactt
gaagaacagaggagcctgccatcagatgacagtctgagccatgtctccaacatcctgctc
atcccgcgtccagctcagggccagtacgaggtcagcagctccctggggtacaccagctgc
acaagagaattgctagaaaagatggtagattcccagagggactccagtgccccgggccgc
ttcacagtgggaagcgctgagtccactctgcacatacggccgggcggttacacaccccag
agggctctcatcaacccgttcgccccctcacgcatgccaatgaaactcacctccaaccgc
cgccgctggatgcacacatttcctgtgggtccttctggagaggcaatccaaatccaccat
cagacgcgacagaacatggcagagctgcaggttagtgagcagagagacccggctcgtacc
tctgccgagctgctagaactggcctatcacgaagctacgggaagcaagcggacagtatcc
cgtcatgcaggagagaatggactgtatatcactggagttcctgataatgtctctggaagc
ccagcaagtagcaacagcactggaacaccagtgaaccgtagttcctttgaggattactct
agtccagatccgatcctgctgctgtctgcccctccgacagtgcctagtttttgctgcacg
gtcggggtggactggaagtcccttaccactcccgcctgtctccccctcacgaccgattac
tttcccgaccgccaaaccctgcagaatgactacacggagggctgctatgacctgctgcca
cacacggacctggagaggcgtgacgatgagtctccagtgatgatggcccatcaggtgttt
gaagagttcatctgtcagcgtctgatgcaaggctaccagatcattgtacatcctaacagg
aagccacagccggctatagccccacccctcagcagcagccccctttattcccgagcgctg
gtgtctcgacgtaaaccagaggaggaggagagtgtttactggctcagtatgggaagaacc
tttcataaagtctgccttaaagataagatcattactgtcacccgctatctcccaaagtat
ccctacgaatccacacagattcagtacagctacaatctgtgccctccacatgcagacgcc
cacttccttccattttgggtggagttcagccacgagcggctggaggagtacaagtggaac
tacctggaccagtacatctgctctgccggctcagaggacttcagtcttattgactctctg
aagttctggcggacgcgcttcttgctgctgccagcgggcggagccaggcgcgtggcggac
ggtgagggtcactgggacgtgtatggggagggaataggggcaggacgagatagcctctct
ggcactggggactggtctcttttggatggatttatccgctttttggaaggcctgaacagg
attcgtcggcgtcaccgatctgatcgaattatccgaaaaggagccaccattaaaggcctg
atggtgacaggatccctttcaccctgcaacccagaacctatagcaccccccgtgggcaaa
aagtgcacctctgccctctctgcacttctggagctggatcagacacagaagagtttagaa
gagcagcagcttgctgctcagcatggtgggaaatcatgtggtcctctcagtgatgctgcc
agcgttgccctaacaaccacctatgttgacagcccccgtaaggacgctgccttcattttg
gactttattcgtagtccacgttcctcctacacctgtcactctcagctgccagctgaacag
gttccagccaatcacattgagggtgggttgtcagacaaaggaggaaaccaaccaggagag
agaacatcagctacatcccaagccacaggagacccaactctaggcactggaggagaaact
gggtccagtggattaagcctttcctcatcttccacactaatggagattctggaagccatt
aagcatcccaccactggagtgcagcttttgccagagcagaggggcctgcctcccaactgc
tttgtcagtgctgaggttgtacattggctggtcagcaccgtggagaatgttgccacacaa
ggcattgcagtagaaatcatgcagaaaatgctggatgaaggtctgataatgcatgcctcc
ggtgatgccatgcggacgtttgtttatgggttctacctctaccggattgtcgacaaggaa
tatgaaaaggcttctacgactcagctgcccccagcgggagccagtgtatggtcagctgca
gctttggaggacttagccctgtttcagaggaagtggttcgaggtggcctttgttatggag
gaacgtcggccttgtgacctacctgccttcctcctcccgtggttgcccagccggccagcc
tcgtatgcaagtaggcatagctccttcagccgcagcttcggtggacgcagccaaactgct
gcactgctagctgccacggttccagagcagaaaacagtcaccttggacgttgatgtgaac
aatcgcagtgatcggactgaatggtgcagttgctattaccatggaaacttctccctcagc
gctgcctttgaaatcaagctgcactggatggctgttactgcagccgtactctttgaaatg
gtgcaagggtggcacagaaaggcggcatcttgtgggttcctgcttgtacctgtgttggag
gttccctttgctttgtcatcgtacctgtatggcgacccactgcgtgctcagttgtttatc
cccctaaacatccagtgcctgctaaaggagggctgtgatagcctgtttgaggggtttgag
ccagagacatactgggacagaatgcagttgtttcaggaggccatactcttcagatttggc
tttgttcaagacaaattctcagcatcagcttttaactttccatcagagaacaaacctcaa
tacatccatgtaacaggtacagtttttcttcagctgccttactcaaaaaggaaatactcc
ggtggacagcggcgaaggcgtaactccgcgaactcctccagtcagaatctgtttggttct
gaggagcgagtgggctacaattgggcctacaacaccatgctgaccaaagcctggaggact
ggcgtgctgggggacgagaaactggctgaccgcctgctgcgagatttcacagacttttgt
gccaacaaggataatcgactggtgacctactgggaaagctgtgttgagaaaatgaacgca
agtgccccttaa
DBGET
integrated database retrieval system
