Carassius auratus (goldfish): 113054242
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Entry
113054242 CDS
T07313
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113054242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113054242
03012 Translation factors [BR:
caua03012
]
113054242
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113054242
Translation factors [BR:
caua03012
]
Eukaryotic type
Release factors
113054242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
113054242
NCBI-ProteinID:
XP_026075431
Ensembl:
ENSCARG00000009915
UniProt:
A0A6P6KVZ1
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All DBs
Position
35:complement(7643701..7649868)
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AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKILYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMDYQGEDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggacaggaacgtggaaatctggaagattaagaagttg
atcaaaagtcttgaggcggctagaggaaatggcaccagtatgatttccctcatcatccca
cccaaggatcagatctcacgtgttgccaagatgttggccgacgagttcggcacggcttcg
aacatcaagagcagagtcaacagactctccgtgctgggagccattacctcagtacagcag
agactcaaactctacaacaaagtgcctcctaatggcctggtggtgtattgtggcaccata
gtgacagaggaaggcaaagagaagaaagtcaacattgattttgagccttttaaaccgatc
aacacatccttgtatttatgtgacaacaagttccatactgaggctctaaccgctctgttg
tcagacgacagcaagtttggcttcattgtaattgatggtagtggtgccctgtttgggact
ttacaaggcaacacaagggaggtgttgcacaaatttactgtggacctgcccaaaaaacat
ggtagaggaggacagtcagctcttcggtttgcacgtttgaggatggagaagagacataac
tatgtgcgtaaggtagcggagacggctgtgcaactcttcgtgtccaatgacaaggttaac
gtggcaggactggttcttgccggttcagccgacttcaagacggagctcagccagtcagac
atgtttgatccgaggttacaagcgaaggttctgaagctggttgatatatcgtatggagga
gagaacggtttcaaccaggccattgagctttcagcagaagtgctgtccaatgtcaagttc
atccaagaaaagaaactaataggccgatattttgatgagatcagtcaggacacagggaag
tattgtttcggagttgaagacacactcaaagcgctggagatgggagcggtggagattctt
atagtttacgagaacctggacactatgcgttatgtcctacgctgtcatggagaaaatact
acaccagaaaatgatgaaaagattctctatctgacacctgaacaggagaaggacaagtct
catttcactgacaaggagacgggtcaggagcatgagctgattgagagcatgccgctgcta
gagtggttcgccaatagctacaagaagtttggggccacgctggaaattgttacagacaaa
agccaggagggttcacagtttgtgaaaggctttggaggcattggtggaatcttgcggtac
cgtgtggacttccaaggcatggattaccagggagaagatgatgagttctttgatttagat
gactactag
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