Carassius auratus (goldfish): 113054353
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Entry
113054353 CDS
T07313
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04142
Lysosome
caua04144
Endocytosis
caua05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113054353
04142 Lysosome
113054353
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113054353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113054353
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113054353
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113054353
Exosome [BR:
caua04147
]
Exosomal proteins
Proteins found in most exosomes
113054353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
113054353
NCBI-ProteinID:
XP_026075644
Ensembl:
ENSCARG00000011125
UniProt:
A0A6P6KTS1
LinkDB
All DBs
Position
35:complement(10554536..10592817)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTDDVTFWKWISLNSL
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFTKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDTEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNHPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDAELWASV
LLETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKFDVNT
SAVQVLIEHISNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPSAYME
VVQVSSQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEFDNAIITMM
SHPTDAWKEGQFKDIITKVANVELYYKAIQFYLDFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLQLIKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMLYASESKDTELAEELLQWFLR
EDKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYAAAPGYPQAPQAQPGFGYGM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcccatcagattccaggagcacctgcagctccaaaatttggggatc
aacccatccaacatcgggttcagcaccctaacaatggagtctgataagttcatctgtatc
cgggagaaggttggagaacaggcacaggtggtgatcatcgacatggcagacccaaacact
cccatccgcaggcccatctctgcagatagtgccatcatgaaccctgcgagcaaagtcatc
gcacttaaagacgctgccaaaacccttcagatctttaacatcgagatgaagagtaaggtg
aaagcccacaccatgactgatgacgtcactttctggaagtggatctctcttaacagtctt
gccctggtgaccgataatgcagtctatcattggagcatggagggagactctcagccggtc
aaagtgtttgacagacattccagcctggccgggtgtcaaatcatcaactaccgcaccgat
gccaagcagaagtggctgctgctcattggcatttctgctcagcaaaacagagttgttggt
gccatgcagctatactccgttgacaggaaggtgtctcagcctatcgagggtcacgctgct
gcctttggccagttcaaaatggagggaaatgcagaagaatccacactcttctgttttgct
gtgcgaggtcaagcaggaggaaagcttcacattattgaagtgggaacaccaccgaccggc
aaccagccattcaccaagaaagctgtggatgtgttcttccctccagaagcacagaatgac
ttccccgttgccatgcagatcagctccaaacaggacgttgtatttctcatcactaaatac
ggttacattcatctgtatgacctggagacgggcacctgcatctacatgaaccgaatcagc
ggagagaccatttttgtgactgcaccccacgaagccacatctggaatcatcggcgtgaac
aggaaaggacaggtgttgtcagtgtgtgttgaggaggagaacatcatccagtacatcacc
aatgtgctgcagaatccagacctggctttacggatggcagtccgaaataatctggcagga
gccgaggagctgtttgcccgcaagtttaacaacctctttgccgcaggaaactactccgag
gcagctaaagttgccgctaatgctccaaagggtatcctgcgcactcctgacaccatccgc
cggttccagggcgtcccggcccagcccggccagacatccccactgctgcagtatttcggg
atcctgctggaccaaggccagctcaacaagtttgagtctctggagctgtgcagacccgtc
cttcagcagggccgcaaacaacttctggagaaatggctgaaggaggacaagcttgaatgc
tccgaggagttgggcgacttggtgaaggctgtggaccccactcttgctcttagtgtctac
ctgagggccaacgtacccaacaaagtcattcagtgtttcgcagaaaccggccagttcccc
aagattgtcctctatgccaagaaggtgggctacactccagactggatcttcctgctgagg
aacgtgatgcggatcagtccggatcagggtctgcagtttgctcagatgctcgttcaggat
gaggaaccgctggctgacatcacacagatcgttgatgtgtttatggagtataacctggtc
cagcagtgcacatccttccttttggatgcgctgaaaaacaatcgcccatcagaaggtcca
ctccagacccgtctgctggagatgaacctgatgcatgcaccacaggttgccgatgccatt
ctaggaaatcagatgttcactaactacgatcgtgcccacattgcccagctgtgtgagaag
gcagggcttctgcagagagctttagagcactataccgacctgtacgacatcaaacgagct
gtcgtacacacacacctgctcaatccagagtggctggtgaactacttcggctctctgtca
gtggaggactctctggagtgtctgagagccatgctgtctgctaacatcaggcagaacctt
cagatctgtgtccaggtggcctccaagtatcacgagcagctgtctacccagtccctcact
gagcttttcgagtctttcaagagttttgagggtctgttctactttcttggttcgattgtg
aacttcagccaggacacagaggtgcatttcaaatacatccaggccgcatgcaagacgggc
caaatcaaagaagtggagcggatctgtcgagagagcaactgctatgaccctgaacgtgtc
aagaactttctcaaggaagctaaactcaccgatcagctgcctctcattattgtgtgcgat
cgcttcgacttcgtccatgatctcgtactctacctgtaccgaaacaacctgcagaagtac
attgaaatctacgtgcagaaggtgaacccaagccgtctgcctgtggtaattggagggctc
ctggatgttgactgctccgaggacgtcatcaaaaacctgatcctggttgtgcggggccag
ttttccaccgatgagctggtggcagaagtggagaagagaaacagactgaagctgttgttg
ccatggctggagtctcgtatccatgaaggctgtgaggagccagctacccacaatgcattg
gccaagatctacatcgacagcaacaaccaccctgaacgcttcctgcgggaaaacccatac
tacgacagccgtgtcgtggggaaatactgcgagaaaagagaccctcacctggcctgtgtt
gcctatgagagaggacagtgtgaccaggagctcatcaacgtatgcaatgagaactcgctg
ttcaagagtttgtcccgttacctggtgcgtcgcagagacgctgagctctgggccagtgtg
cttttggagaccaacccttaccgaaggccccttattgaccaggtggtgcagactgccctg
tcagagactcaggacccagaggaggtgtcagtcacagtgaaagccttcatgactgctgac
ctgcccaatgaactcattgagctcctggaaaagatcgtcctggacaactcagtgtttagt
gaacacagaaacctgcagaacttgctcatccttacagccatcaaagcagaccgcacccgc
gtcatggaatacatcaaccgcctggacaattacgatgccccagacatcgccaacatcgcc
atcagcagcgagctgttcgaggaggcctttgctatcttcaggaagtttgatgtcaacacc
tctgcagtgcaggttctgattgagcacatcagtaatctggaccgggcgtatgagtttgca
gagcgctgtaatgaacctgcagtgtggagtcagctggctaaggctcagctgcaaaagggt
ctcgtcaaagagtccattgattcctacattaaagctgatgacccctcggcttacatggaa
gtggttcaggtttcttcccagagtggtaactgggaggacctggtgaagtttttgcagatg
gccagaaagaaggccagagagtcatacgtggagaccgagctgatcttcgcactggccaaa
accaatcgtcttgctgaactggaggagtttataaatggaccaaataatgcacacatccag
caggttggagatcgctgctatgatgagaagatgtacgaggcggccaaacttctgtacaat
aatgtctccaacttcggccgcttggcttctacactggtccacttgggcgagtatcaagct
gcggtcgatggtgcccgcaaggctaacagcactcgcacttggaaggaggtgtgctttgct
tgtgtggatgggaaggagttcagattggctcagatgtgtggccttcacatcgtagttcat
gcagatgaactagaagagctcatcaactattaccaggaccgtggctactttgaggagctg
atcaccatgctggaggcagccttggggctggaacgtgctcacatgggcatgttcacagag
ctggccatcctctactctaaatttaaaccacagaagatgagggaacacctggaactcttc
tggtccagagtcaacatcccaaaggtcctgagggccgcagagcaggctcacctgtgggga
gagcttgttttcctctacgacaagtatgaagaattcgacaacgccatcatcaccatgatg
agccatcccacagatgcctggaaagagggacagttcaaggacatcatcaccaaggtggct
aacgtggaactgtactacaaagcaatccagttttatctggacttcaagcccttgttactg
aatgacctgctcatagttctttccccaagactggatcactcacgtgcggtcaacttcttc
agcaaggttaaacagcttcaactcatcaagccttacctgcggtcagtacaaaaccataac
aacaagtctgtcaatgaagcacttaacaacctcttcatctcagaggaagactatcaggca
ctcaggacatctatagatgcatacgataactttgacaacatctcactggcccagcgtctg
gagaaacacgagctgattgagttcaggagaattgctgcttacctcttcaaaggcaacaac
cgatggaagcagagcgtggagctgtgcaagaaagacaaactttacaaggatgctatgctg
tatgcatcagagtcgaaggacacagagctggccgaggagctgctgcagtggttccttcgg
gaagataaaaaggagtgttttgctgcctgcctcttcagctgctacgacctgctccggcct
gatgtggtgctggagacggcgtggaggcacaacattatggactttgccatgccttacttc
atccaggtgatgagggagtacctcagcaaggtggacaagctagagacctcagagtccttg
aggaaagaggaggagcaggcgacagagactcaacccattgtttatggcacgcctcagctc
atgctgacagcaggccccagtgtgcctgtccccccgcagcaggcttatggctacggttac
gcagcagctcctggctacccccaggctcctcaggcccaacctggttttggttatggcatg
taa
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integrated database retrieval system
