Carassius auratus (goldfish): 113054361
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Entry
113054361 CDS
T07313
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113054361
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113054361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
113054361
NCBI-ProteinID:
XP_026075655
Ensembl:
ENSCARG00000013768
UniProt:
A0A6P6KTJ3
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All DBs
Position
35:complement(10631546..10882716)
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AA seq
905 aa
AA seq
DB search
MKGGGGGKEPPVEGEVSGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCAE
SGAQEGECGGMEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVSNARKKVWSLPS
NPSKDSSLAKKQPKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREMSSSSSQTGGT
DVAKHTGKSALFQLAEISSSPGQPAGGSMKAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSQSASEGRQCGQSALFQLAEMCLASEADKMEAGSSQPSGGSSSLCAQ
HGSSSTDITEHQEQADAPELPLTTPSSSSSSSSTSGSTSSSPTDTTPSDQSPCKTLKKKK
KKKTNKDSDENPASPKKAKKRHSPESDLDSVMFTIEAVAKGAWGLEETPRKKSHPSSSEG
SPTMDQSPAVKKKAKSKPKKQLKFKDDSAEEEEEWDVETNKPQDEEMKTEEAPLTPKAES
ENEQDMKVETPSGVEDMAPHCSPPRPTELEEEKDTDTKPPQTSPEDKEPEVKPETCGSRK
SERSCKGALYKTLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGGWNDESWGFSQAVTSNP
KKLKKSKSKEEATTGLGKLEEEFEKKFNSLPQYSPLTFDKKSMAVTKKKKNSTSSPPEPP
KTCKGSSSSQKKTLFHKIVNKYKHRKEKSSAADKDIVPTDPMATESSPLKSGSPCVSPSP
EPQKVLDTPVGSQKRKARKSKITHLVRTADGRMSPAEAEDKFKNQDEKPFTQETLCNSGI
CYKDPRSVEADVADASGSLPAFFSLAALAEVAAMENVHRAQRAVNIPTEGQVKDIAPVLI
SCADQ
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggtggagggaaagaacctccggtggaaggagaagtcagcggaaagagg
cccaaacgcaagtgtctgcagtggcacccgctgctggccaagaaagctccagacttctcc
gaggaagaggaggaggaggatgaagaggagctggagaaggagccggtgttatgtgcagag
agcggagcacaggagggagagtgtggcgggatggaagatgacagtgaggaatactcctct
gaacaacgggctcgccggcccatgaacgcctttctgctgttctgcaagcgacatcgttcg
ctggtccgacaggagcatccgcgactagacaaccgaggagccactaagatcctggcagac
tggtgggccgtactggaccccaaagaaaaacaaaaatacacagacatggccaaggagtat
aaggatgcgttcatgaaggctaatcctggttacaaatggtgtcctgccaccaacaagccg
gtaaagagtccgtctcactccgtgagtaacgctcgcaagaaagtctggtctcttccatcc
aacccaagcaaggattcttcacttgccaaaaaacagcccaaaactgacagcacaccccag
ctcaactttgccatggctgatcccaataagatgggcggcctgagcatgctgctgttagcc
ggggagcatgcgctgactgccagagagatgtcctccagctcttcccagacaggaggcaca
gatgttgctaagcacactgggaaatcagcccttttccagctggctgagatttcttccagt
cctggacagccagctgggggaagtatgaaagctgaggacacaagctctctcacacatgta
gaggcctctggaccatctcagccaagttcgccagacctacctaagagttgtgttaaatca
cccttgtttcagctggcggagcagatctcctccagtaggtctcagtcagcatctgagggg
aggcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcctctgaggct
gacaagatggaagctggatcgtcgcagccctctggtggttcctcctcactctgtgctcag
cacggctcaagtagcacagacatcacagaacaccaagagcaggcggatgctcctgaactt
cctctcaccacaccatcatcatcctcatcatcttcctctacctctggctccacctcgtca
tctcctactgacaccaccccatcggatcaaagtccatgtaagacgctgaagaagaagaaa
aagaagaaaacaaataaagactcggacgaaaatcctgcatcgcccaaaaaggcaaagaag
cgccattcgccagagtcggacctggacagtgtgatgttcaccatcgaagcggtagcaaaa
ggtgcttggggcttggaagaaacacccaggaagaaatctcatccctcaagtagcgagggc
agccccacaatggaccaatctccagctgtgaagaagaaagcaaaatctaaaccgaaaaaa
cagctgaaatttaaagacgacagtgcggaagaagaggaagaatgggacgtagaaaccaat
aaaccacaggacgaagagatgaaaactgaggaagctcctctgacccctaaagcggagagt
gagaatgagcaagacatgaaggtggagacacctagtggtgtggaggacatggcaccacac
tgctctcctcctcgacctacagaactagaggaggagaaagacacagacaccaaaccacct
caaaccagtccggaagataaagagccagaggttaagccggagacctgtgggtccaggaag
tctgagagaagctgtaaaggagcgctttataagactctggtttccgaagggatgcttaca
tcgctgagagcaaatgtggacagagggaaaagaggttcaatgcgaggcagtgtgtccgat
catgagggcggctggaatgacgagagctggggattttctcaagctgttaccagcaaccca
aaaaagctcaagaagtccaagtctaaagaggaagccaccacaggactaggaaagcttgag
gaggagttcgagaaaaaattcaacagcttaccgcagtacagcccactgacttttgacaaa
aagagcatggcggtcaccaagaagaaaaaaaacagtacatccagccctcctgaaccgcct
aaaacctgcaagggttcatcttcatctcagaaaaagaccttattccacaagatagtgaac
aagtacaaacacaggaaggagaaatccagtgccgcagacaaagacatcgtcccaactgac
ccaatggctacagaatcaagtccactgaagtcgggcagtccgtgtgtttctccctctcct
gaaccccagaaggttctggacacacctgtgggcagtcagaagaggaaggccaggaagagt
aaaatcacacacttggtgcgcacggctgatggcagaatgtcacctgcagaggcagaagac
aaattcaagaatcaggatgaaaagccattcactcaagagacattatgcaatagcgggatc
tgctataaggaccccagatcagtggaagcggatgtggctgatgcgtccggcagcctcccg
gccttcttcagcttggctgctctcgctgaggttgcagccatggagaatgtgcacagagcc
cagcgtgctgtgaacatccccactgaaggtcaagtgaaggacatagctcctgtgctgatt
tcctgtgcggaccagtga
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