Carassius auratus (goldfish): 113054454
Help
Entry
113054454 CDS
T07313
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113054454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113054454
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113054454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF7158
Motif
Other DBs
NCBI-GeneID:
113054454
NCBI-ProteinID:
XP_026075819
Ensembl:
ENSCARG00000021959
UniProt:
A0A6P6KU89
LinkDB
All DBs
Position
35:12678732..12681586
Genome browser
AA seq
358 aa
AA seq
DB search
MGVVLNYGINSYISIVVLYFQSHRNTYADVVITKHIITAGKEQAAPQSAGWETALAPLTG
AEDARVTSLRHCSLHAALPNIMAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNI
SSISTADGSALVKIGNTTVICGIKAELTMPPSDAPNKGYIVPNVDLPPLCSSRFRPGPPG
EQAQSASQFIADVIESSDLINLEELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIALLAA
LRNAQLPEATINKETDLAEVDIQKKRHLKINRHPVGSSFAVFDDSIIIVDPTAEEESLST
ALLTVVTDEEDRLCAVHKPGGTSLSGEKLQHCINRAITRNKEISKLVDKVFESMKTAK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgtactaaattacggaataaatagttacatctccattgttgtactttacttc
cagtcacacagaaacacctatgcggatgttgtcattacgaaacacatcatcacagcgggc
aaagaacaagcagcgccgcagagcgccggatgggaaacggcactagcgcccctcactgga
gcggaggacgcgagagtcacgtctttacgtcactgcagtcttcacgcggcgcttccaaac
atcatggcggctggtttcaaaaccgcagagcctctagaatatcacaggagctttctgaaa
gaaaactgtcggccagatggaagggaattgggagagttcagacccacaaccttaaatatt
agctctatatctacagctgatggatcagcattggtaaaaattggaaacaccacagtgatc
tgtgggatcaaagctgaattgactatgccaccatctgatgctccaaataaaggatatata
gtcccaaatgtagatctgcctccactgtgctcatctagattcagacccggtccaccagga
gaacaggctcagagtgccagccagtttatcgcagatgtcattgaaagttcagatttaata
aatttggaggaattgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatatt
atgtgtttggattacgacgggaacttacttgacgcctgtatcatagctctgctggcagct
ttaaggaacgcccaactccctgaagccactataaacaaggagacagatttagcagaagtt
gacatccagaagaagaggcacttgaagatcaaccggcatccagttggctcatcatttgca
gtatttgacgactctataatcatagtcgaccccacagcggaagaagaaagcctgtcaaca
gcattactgaccgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggt
gggacgtcgttatctggtgagaaactgcaacactgcataaatcgggccataacgagaaac
aaagaaatcagcaaactggtggacaaagtctttgagagcatgaagacggcgaaataa
DBGET
integrated database retrieval system
