Carassius auratus (goldfish): 113054739
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Entry
113054739 CDS
T07313
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113054739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113054739
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113054739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
zf-FPG_IleRS
DUF3854
Motif
Other DBs
NCBI-GeneID:
113054739
NCBI-ProteinID:
XP_026076291
Ensembl:
ENSCARG00000032764
UniProt:
A0A6P6KY33
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All DBs
Position
35:complement(18187300..18243539)
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AA seq
606 aa
AA seq
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MSNYSVSLTGPSPWGFRLQGGKDFSMPLTISKLTEGGKAAKAKISVGDVVLSIDGIATEG
MTHLEAQNKIKACTGNLNLSLLRSSSATKTDTPKEEPLEIIKPVPISTPASLAPGSSAYN
KTARPFGGTPSTVRSVSPSPAAPKASIPSIPSASSAFTPAAPSQQPPQPPFPLGASRAVS
SPSSAPKPASGHSPFANSSSTSSSGSSSPARVLAPPPAPAAPLPSVYNTPINLYSNENAC
EVAMGQRRGLLESRAPGEQHNGTARKPVLEPEGNHVSAPSDSSKKRLMEDTEDWHPRTGT
SQSRTFRILAQITGTENEQAQENRPGKSEASEELQPSSHATSSVKTMSKASAGAPRQGNG
VPPASAKSSAAGFPKAGAPAPQTGPSFGRVSNSLPKGPDRPAPQPHPSDQDDSLVQRAEH
IPAGKRTPMCGHCNMVIRGPFLVAMGKSWHKEEFTCSHCRSSLADVGFVEERGSVYCERC
YEQFLAPACFKCQQKILGEVINALKQTWHVHCFLCTGCQKPIRNNTFHLEDGQPYCETDY
YTLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCTVCSTSLEGQTFFSKKDKPLCKKH
AHSVQF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacagcgtgtccttgactggaccttccccctggggcttcagactacagggt
ggcaaggacttcagcatgcctctcaccatctccaaactgacagaaggaggaaaggcagcc
aaagccaagatcagcgtcggggacgtcgtgctgtctatcgacggcatcgccaccgaggga
atgacacacctggaagcacagaataaaatcaaagcctgtacgggaaacctgaacctctcg
ctgctgagatcttccagtgccactaaaacggacacccccaaggaggaaccgctggagatc
ataaagcccgtgcccatcagcacccccgccagcctcgccccgggcagcagtgcatacaat
aagacggcacgacccttcggcgggacccctagcaccgtcagatcagtcagtccgtcccca
gccgcccccaaagcatccatcccctccatcccctccgcctcctctgcgttcaccccagct
gctccgtcccagcagcctcctcagcctcccttcccactgggagccagccgtgctgtgtcc
tctccaagctccgcccccaaacctgcctccggacactccccctttgctaactcctcctcc
acgtcctcctctggctcctcctcgccggcgagagtgctggctccgccccctgctcccgcg
gctcctcttccgtccgtctataacacgcccatcaacctctactccaatgagaacgcgtgt
gaggtggccatgggccagagacgcggactgctggagagcagagcccctggggaacagcac
aacgggaccgcccgtaagcccgtgctggagccggaggggaaccacgtctctgctccgagt
gactccagtaaaaagcgtctgatggaggacacggaggactggcacccgcgcaccggcacg
tctcagtcacgcaccttccgcatcctggcgcagatcaccggcacagagaacgaacaagct
caggagaaccggccggggaagagcgaggcttcagaggagcttcagcccagttctcatgcc
acgtcttcagtcaaaaccatgagtaaagcgtccgctggagccccgcggcagggcaacggt
gtccctccagcttcagccaagagcagcgccgcagggtttcccaaagcaggtgcacctgcg
ccacagacgggcccctcattcggacgggtcagcaacagccttcccaagggcccggatcga
cccgcgcctcagcctcaccccagtgaccaggacgattctctggtgcagagagccgagcac
atcccggcggggaaacgcacacctatgtgtggccactgcaacatggtcatcaggggtccg
ttcctggtggccatgggtaaatcctggcacaaggaggagttcacctgctctcactgccgc
agttctctggcagacgtgggcttcgtggaggagcgtggctctgtgtactgcgagcgctgc
tacgagcagtttctggccccggcctgcttcaagtgccagcagaagattctgggggaagtc
atcaatgccctgaagcaaacctggcatgtgcactgcttcctgtgcaccggctgccagaag
cccatccgaaacaacacctttcacctggaggacggccagccgtactgtgagaccgattac
tacaccctgttcggcaccagctgtcacggctgtgacttccccatcgaagcgggcgataag
ttcctggaggcgctgggcttcacctggcacgacacctgcttcgtctgcacggtgtgcagc
acgagtctggagggtcagaccttcttctccaagaaagacaagcccttgtgcaagaagcac
gctcacagcgtccagttctga
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