Carassius auratus (goldfish): 113054960
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Entry
113054960 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113054960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113054960
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113054960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113054960
NCBI-ProteinID:
XP_026076572
UniProt:
A0A6P6KYY0
LinkDB
All DBs
Position
36:2603994..2609640
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AA seq
372 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLSEIDLKNGYGFVEFEDTSDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGGGGRSSSGYSSRSRSGREKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRAVDKLDGTDINGRKI
RLVEDKPRRRRSYSRSRSRSRSRRRSRSRSRRSSQSRSRSRSRSRSRSKHRSRSRSGRKS
RSRSRRKSHSKSPTKSRSRKSKSRSRSQKSRSRSTSPKSRSRKSRSKSRSKAKSDRDSRS
RSKEKSVSKRSRSRSASPMENGNGERAKSSSRSPSPKEDRRQSESPGKRSVSRSPSRSKS
RSRSRSRSASQD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtgtacatcggcaggctgagctataacgtgcgagagaaggacatacagagg
tttttcagcggctacgggaagctgtcggagatcgatctgaagaacgggtatgggtttgtg
gagtttgaggacacgagtgacgcagacgatgcggtgtacgagctgaacggtaaagatctg
tgcggggagcgtgtgatcgtggagcacgccagaggaccgcggcgggaccgggatggatat
ggtgggggttatgggggcggcggcgggcgcagcagtagtggttatagcagcaggagccgg
agtggaagagagaaatatggacctccggttcgcaccgagtaccgtctgatcgtggagaac
ctgtccagtcgctgcagctggcaggatctcaaggacttcatgcgtcaggccggagaggtg
acctatgctgacgcccacaaggagcgcaccaatgagggcgtcatcgagtttcgctcctac
tccgatatgaagagagctgtggacaagttggatggcactgatatcaacggaagaaaaatc
cgtcttgtggaggacaaaccgagacgacgtcgctcgtactctaggagcaggtcaaggtct
cgcagccgacgccgttctcgaagcaggagtcgcaggagttcacaaagccgttccaggtcc
agatctcgctcgaggtcccgcagcaagcaccgctctcgctccaggtctggtcgcaagtca
cgctccaggtccaggagaaagtctcactccaagtcccctacaaagtcccgctccaggaag
tcaaagtcccgttcccgctcgcagaagtcacgcagtcgctccaccagccccaaatcccgc
tctcgcaagtctcgctccaagagccgctccaaagccaagtccgacagagactccaggagc
cgctccaaggagaagtccgtcagtaagaggtcccggagccgctcggcttctccaatggag
aatggaaatggagagcgggccaagtccagttcccgctccccttctcctaaagaagaccgg
cgtcagtctgagtcgcccggcaagcgttcggtgtctcgctctccttcacgttcgaagtct
cgttctcgttcccgctctcgctctgcctctcaagactag
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