Carassius auratus (goldfish): 113054968
Help
Entry
113054968 CDS
T07313
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113054968
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113054968
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113054968
Membrane trafficking [BR:
caua04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
113054968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
113054968
NCBI-ProteinID:
XP_026076633
Ensembl:
ENSCARG00000000416
UniProt:
A0A6P6KZD0
LinkDB
All DBs
Position
1:8550005..8562361
Genome browser
AA seq
997 aa
AA seq
DB search
MSSNQGSPPIPQSSDGLFRKPRDPSVAPRHYRRVRSLPDVCPKEPPGEAGALCDGPSVVA
DQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFTETEVMPSFYLPNISREHFSS
YLQETAQREKIHERCKNICLNKDDLAVPTITNNHDKARAELEQVPKIFMKPEFVLNDPAT
FNAVLPWSHFSVAGGKNSRDVASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQ
HELQDRLRETSDAVAKLRARTAAIDRVMCRGPLQALRDTLTRNNCIKLHNKLKLMAAVHQ
TQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCEMERLIDKMMVADF
STYTQSDLSRAFEEDAQVLEKVPQQPAASGKDRLQSLVFGLLRQRKLDFLDIYSEEMIRA
AKNIVRQCVMKSVSQISEIDADTVKFHEQMRLMTFHQWFDLLLDIFEHFILFLKRIKATL
SVIRNVVLEVLDSSQRSRLADANHSDGRTNEEEEEAESGGPALHSGEAELAYLTHEGLFI
SDALNEAEQRSNAAAHAQLRAQTHTETCGSDSASVTTESSSSREHNSNTTSSLPIGGAAA
ISEDVMPSDLELSRVASNVQELLYTASDVSHDRCVKVLMTRAKDGSLERLSASEFVCLSQ
AVESFVRDTEELCGRRSMSLRGALQSQANRFVQRFHEERKTKLSLLLDNERWKQAEVPAE
FQDLVDSIADGRIMLPERRHTGSEDRKPGEFLCVDAQKYAVVGTVLLLIRMFLEYCQCVN
DIPSITTDILTRLADLLKHFNSRSCQLVLGAGALQVVGLKTITTRNLALASRCLQLVVHY
IPVIRAHFETRLQPRQYSILRHLDHITKDYNDHIAEISAKLVAIMDSMFEKALSKYEVKA
PMPSACLRNVCKQMAKMHEAINELLPEEQTQMLFLRINASFKLHLKRQLARLGVGNDGGP
QYGLVMVDVAFYSENVQALRSLEHLDLNMPEIWEQKR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaatcagggctcgcctccgatccctcaatccagcgatggactcttccggaag
cccagggacccttcggtggcccccagacactatcgaagggtgcgctccttaccggacgtg
tgccctaaagagccccccggtgaggctggagctctctgtgatgggccgtctgttgtggct
gaccagcaccgctggactgtgtataactctaaagtgaacctccccgcggccctcaatgac
cccaggctggccaagagagagtcagacttcttcactaagacctggggcctggacttcacc
gagaccgaggtcatgccttccttctacctgcccaacatcagccgagaacacttcagctcg
tacctgcaggagacggctcagagggagaagattcacgagcgctgtaagaacatctgcctg
aacaaagacgatctggcagtgcccaccatcaccaataatcacgataaagccagagctgaa
ctggagcaggtgcccaagatcttcatgaagcctgagtttgtgctgaatgatccagccacg
tttaacgcagtgttgccgtggtctcacttcagcgtcgccgggggcaaaaacagccgagat
gttgcgtcgtcacggttactgcaggaaaagttgagtcactatctggacgtggtggaggtg
agcatcgctcggcagatctctctccgctccgaggctttttttcacgccatgtcgtcgcag
cacgagctccaggatcgtctgcgagagacgtccgatgctgtggccaagctccgcgcacgc
accgccgccatcgaccgtgtgatgtgccgcgggccactgcaagcactgcgggacactctg
acccgcaacaactgcatcaagctacacaacaagctgaagctgatggcggccgtgcaccag
acgcagcccaccgtgcagcttctgctctccacctcagagttcgtcggcgcgctggagctc
atcgccaccaccaaagaagtgctgcagcaggaactgcaggggattcacagcttcaggcac
ctgggttctcagctctgtgagatggagaggttgatcgataagatgatggtggccgatttc
tccacctacactcagagcgatctcagtcgagcctttgaggaggacgctcaggtcctggag
aaggtcccacagcagcctgcagcgtcaggaaaggatcgcttgcagtctctggtcttcggc
ctgttgagacagaggaagctggatttcctggacatctacagcgaggagatgatccgagca
gctaagaacatcgttcgacagtgtgttatgaagtctgtgtcgcagatcagtgagatcgat
gcagacactgtcaaatttcacgagcagatgcgcttgatgacgtttcatcagtggtttgat
ctgctgctggatatttttgagcacttcatcctgttcctcaagaggatcaaggctacgctc
agcgtcatccgcaacgtggtgctggaggtgctggacagcagccagaggagtcggctagca
gacgccaatcattctgacggcaggaccaatgaggaggaagaggaggcggagtctggaggc
cccgcccttcattcaggagaggcggagcttgcgtatctcactcacgaggggctgttcatc
agcgatgcgctgaatgaagcggagcaacgcagtaatgcagcagcacacgcgcagctgaga
gcacagacacacacagagacctgcgggagcgactcggcctccgtaaccaccgaatcatcc
tccagcagggaacacaactctaacactacctcctccctgcccataggaggcgctgctgcc
attagtgaggacgtcatgccgtctgatctggagttgagtcgggtggccagtaacgttcag
gagctgctgtacacggcttcagacgtcagtcacgaccgctgcgtcaaagtgctgatgacc
cgagccaaggacggctccctggagcgcttgagcgcgtcagagtttgtgtgtttgagtcaa
gcggtggagtcgttcgtcagagacactgaagagctgtgcggccggcgcagcatgagcctg
aggggggcgctgcagagtcaggccaaccgcttcgtgcagcgcttccatgaagagcgcaag
actaaactcagtctgctgctggataacgagcgctggaagcaggctgaggtcccggctgag
tttcaggatctggtcgactccatcgctgacggacgcatcatgctgcccgagcgcagacac
acagggtccgaggacaggaagcccggtgagtttctgtgcgtcgatgcgcagaagtacgct
gtggtggggacggtgctgctgctgatccggatgtttctggagtactgccagtgtgtgaac
gacatcccctccatcaccaccgacatcctcacgcgcctcgccgacctgctcaagcacttc
aattctcgcagctgtcagctggtgctgggggcgggagctctgcaagtggtgggcctgaaa
accatcaccaccagaaacctggctctggcgtctcgctgtcttcagctggtggttcactac
atccctgtgatccgagcacactttgagaccagactgcagcccagacagtacagcatactg
agacacttggaccacatcaccaaggactacaacgatcacatcgcggagatctctgccaag
cttgtggccatcatggacagtatgtttgagaaggctctgtctaagtacgaggtgaaggcg
ccgatgccgtctgcgtgtttgcgtaatgtgtgtaaacagatggccaagatgcacgaggct
attaatgagctgttaccagaggagcagacgcagatgctgttcctcaggataaacgccagc
tttaagctgcatctgaagagacagttagcgcggctgggagtcggcaatgatggtggacct
cagtatgggctggtgatggtggacgtggcgttttactcggagaacgtgcaggctctgcgc
tctctggagcatctggacttaaacatgccggagatctgggagcagaaaaggtga
DBGET
integrated database retrieval system
