Carassius auratus (goldfish): 113055105
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Entry
113055105 CDS
T07313
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113055105
03015 mRNA surveillance pathway
113055105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113055105
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113055105
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113055105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113055105
NCBI-ProteinID:
XP_026076879
Ensembl:
ENSCARG00000052011
UniProt:
A0A6P6KX95
LinkDB
All DBs
Position
36:complement(7235589..7242171)
Genome browser
AA seq
479 aa
AA seq
DB search
MASDSWAQAVDEQEAAAESIGSLQINEKDDQLKAAANGAKTEGNAEKTEDEDKDDKAAQS
LLNKLIRSNLVDTSSQVEVLQRDPSSPLYSVKSFEELRLKPPLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTRLQEQIVIGTPGTVMDWCQKLKFIDPRKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEDTVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagactcgtgggctcaggccgtcgatgaacaagaagctgcggcggagtcgata
ggcagcttgcaaataaatgaaaaagatgaccagctgaaagctgcagcaaatggtgcaaag
actgaaggcaacgcagagaaaacggaggatgaggataaagatgacaaggcggcacagtct
ctgctgaacaaactgatccgcagtaatctggtggacacgagcagtcaagtggaggtcctt
cagagggacccgagctctccgctgtactccgtcaagtcattcgaggagctgcgactgaag
cctccgctgctgcagggagtgtatgccatgggtttcaacaggccctctaaaatccaggag
accgcattgcccatgatgctcgcagaacctccacagaatctgatcgctcagtctcagtca
ggcacgggtaaaaccgctgcttttgtgctggccatgttgagtcacgtggaccctgaaaac
aaatggcctcagtgtctgtgtgtgtcccccacatacgagctcgccctccagacaggcaag
gtcatcgagcagatgggcaaattctaccctgaagtccaactggtgtatgccatcagagga
aacaaattggagcgggggacgcggttacaggaacagatcgtgatcggcactcctggtact
gtcatggattggtgccagaagcttaaattcatcgaccccaggaagatcaaggtgttcgtc
ctggatgaagcggatgtcatgatcgccacacagggccatcaagaccagagcattcggatc
cagaggatgcttcctaaaacttgccagatgctgttgttctcggccacatttgaagacacc
gtgtggaacttcgcaaagcggatcgttcccgaccccaacatcattaaactgaagcgcgag
gaggaaaccctggacaccatcaagcagtactacgtcatctgcaacagcaaggaggagaaa
ttccaggctttgtgcaacatttatggagccattactatcgcacaggctatgatcttctgc
cacaccaggaaaaccgcggggtggctggcaggagagctgtccagagaaggccaccaggtg
gcgctcctcagtggagagatgcaggtggaacagagggcagcggtcatcgaacgtttccgt
gatggcaaggagaaagttctggttaccactaatgtctgtgctagaggtattgatgtggag
caagtttcagtcgttatcaactttgatctgccagtggacaaggatggaaaccctgacaat
gagacgtatttgcatagaatcgggcgtactgggcgattcggcaagagggggttggccatc
aacatggtggacagcaggtttagcatgaacatcctcaaccgcatccaggagcacttcaat
aagaaaatcgagaagctggacaccgatgatttggatgaaattgagaaaatcgccaactga
DBGET
integrated database retrieval system
