Carassius auratus (goldfish): 113055202
Help
Entry
113055202 CDS
T07313
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113055202
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
General mRNP proteins
113055202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RBD_DEAH11
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
113055202
NCBI-ProteinID:
XP_026077038
Ensembl:
ENSCARG00000012367
UniProt:
A0A6P6KXM6
LinkDB
All DBs
Position
36:complement(9918857..9925074)
Genome browser
AA seq
525 aa
AA seq
DB search
MADDLDIEAMLEAPYRKDDNKSLSSNGHEERSKKKKKSKSRSRSHSREKKRSRSRDRKRS
HDRRRSRSKDRKRSRSRERRRSRSRSRERGGRYKAPFSGLKFNGGPRGKTGPPPAIKLSR
RRSRSRSPFKKEKSPIRKPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDTTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALNMSGSMVAMAAATAAMNPGLSFNLNMPPNQALNLPSQPIATHC
FQLSNMFNPNSENDLGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacatcgaagcaatgctcgaggctccatatagaaaggatgacaac
aagtccttaagttccaatggccacgaggagcggagcaagaagaaaaagaagagcaaaagt
cgcagcagaagccacagtcgggaaaagaaaagaagcaggagtcgtgatcgcaagagaagc
catgaccgcaggaggagccgcagcaaagatcggaagcgcagccgcagcagggagagacga
cgcagccgttccaggagcagggagcgtggtggtcgctacaaagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgt
agaaggtctagaagccgcagtcctttcaagaaagagaaaagccctataaggaagcccatt
gataatctcacccccgaagaaagggatgcacgcacagtgttttgcatgcagctggcagcc
aggatccggccacgagacttggaagaatttttttctgcagtgggaaaagtgcgagatgtg
agaattatctctgatagaaactctagaagatctaaaggaattgcatacattgagtttgtg
gataccacctctgtacctttggcaattggcctgtctggtcaaagactactcggagtacca
atcattgtgcaggcttcacaggctgagaaaaacagagccgctgcattggccaacaacttg
cagaagggcagtgctggacctatgagactttatgttggctcattgcattttaatatcaca
gaagacatgctccgaggcatctttgagccatttggaaggattgatagtattcaactgatg
atggacagtgaaacaggacgatcaaaaggatatggctttatcacattttctgatgctgaa
tgtgccaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagaggactgatgcctccactgccagctccttcctggacaacgat
gagctggaaaggacaggcattgatctgggaactactggtagacttcaactcatggccaga
ctggccgaaggtactggtctgcagatcccacctgctgcacagcaggcccttaacatgagt
ggctccatggtagccatggctgcagctactgctgctatgaaccctggattgagttttaac
ctcaatatgcccccaaaccaagcattgaatctaccatcacaaccaattgcaacgcactgt
ttccagctgtctaatatgttcaatccaaactcagaaaatgatcttggttgggaaattgag
attcaggatgatgtcattgaggagtgcaacaaacacggtggagtcatacacatatacgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgctgtcagtgcgttacatggacgttggtttggaggtaaaatgatcacagcagcttat
gttcctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
DBGET
integrated database retrieval system
