KEGG   Carassius auratus (goldfish): 113055405
Entry
113055405         CDS       T07313                                 
Name
(RefSeq) protocadherin-20-like
  KO
K16498  protocadherin delta 1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    113055405
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:caua01009]
    113055405
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113055405
Protein phosphatases and associated proteins [BR:caua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113055405
Cell adhesion molecules [BR:caua04515]
 Cadherins
  Protocadherins
   113055405
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Cadherin_2 Cadherin_CELSR2_9th DUF4139 FAM176 Pox_I1
Other DBs
NCBI-GeneID: 113055405
NCBI-ProteinID: XP_026077489
Ensembl: ENSCARG00000035499
UniProt: A0A6P6KZ01
LinkDB
Position
36:15805879..15810284
AA seq 883 aa
MWNNKRGTCLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGTLIGAISSDLK
LDLSVNPPRSFNLELKTASQQYVNLNNTTGELFTSALEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKIKIIIEDVNDNRPHFPVGEIRVFVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGTPPLLG
TATLRIIIMDVNDNCPKFTESQVNVTLYGNASKGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLFKLIVLANGPTCIPEVAMVTIHVIKQLSG
PPVVIPRYIASEKDGVVSISESEPAFSPIALFTIKNTEPQQKIECLLEGTGPFRLVPYER
FKNEYLLETTELLDYEQQQDYEIVIVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAIDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGALT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKSLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGVLPPDKEGRKGEQVPNLCGEYQVLLLALTATCLGLFLTV
LSLVMFICCKKRKPKKKRLESEIPLNLINQEMVVKNLMEISNI
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgtggaacaataaaaggggaacctgtcttcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcccctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacactcataggggctatcagttcggacttaaaa
ttggatctttccgtcaatcctcctcgctcgttcaatctggagctgaagacggccagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgcgctggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaagattaaaatcattatagaggatgtg
aatgacaaccgtccgcatttccctgttggcgaaatcagggtgtttgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtagatcccgacatcgggattcac
agcgttcaaacatactggcttgtaaatgactatggcgttttcacattagacgtagaggag
aacgaaggcggtgaactgacgccgtttctaatcattaccgagtctcttgatagggagacg
caagctgagtatgtgactgacattatagccgaggacggaggcactccgccgcttctaggc
actgcaactctgaggattatcatcatggacgtcaacgacaactgccctaagtttacagag
tcacaagtgaacgttactctttatggaaacgcttctaagggcatgcaactggctcgtcta
caagcctacgatcctgacgagggagccaacgccttgatcacttataccttcagcgaacgg
gtcactcaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcgggaaagattgacaacaacaccgggaaactcttcaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaatggttaccattcatgtcatcaaacagctctctggc
cctccggtggttatcccacgttatattgcgtccgagaaggacggtgttgtgagtataagt
gaatcagagccagcgttttcacccattgctttgtttaccatcaaaaacacagagccacaa
cagaagatagagtgtcttcttgaaggtacaggtccgtttagacttgtaccgtatgagcgt
tttaaaaacgagtacctgcttgagaccaccgagctattggattatgagcagcaacaggat
tatgaaattgttattgtggttcgcaactctcatggattagtagttaacactgtagtgaag
gtccatgtgctggacgttaacgacaatgctccggtcttcaagcaatctttcattgaaatc
acagtggaggagaacaacccgccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggcgctgacgctcccaccattttt
gacttggatcggtcaaccggggtactgacggtgtccacttctcttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagccatagaccgtggcacgccgagaaaggaatcaatc
gccactgtgattatcaccgtccaggatcgcaatgacaacagtccgcggttcatcaacaag
gacttcaccttcttcgtgccggagaactttccaggttttggggaaattggcgctcttact
gttacggatgcagatgctggagagaacggctgggtggcgttgtccattcttaacgggagc
gacatcttcgtgattgacaccggacggggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtactacgtttggatcgaagcaattgacggaggcgaacctgctctt
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgataaccctccaactgtt
cttttccctcagtccaaccagtcgtacatgttggtgcttcccaacacgcttccaggaacg
tctataacggaggtttacgcggtggaccgggacactggaatgaacgctgttattgcgtac
agcatcatcaagagaacagatggagagccaggctcatttgacattgacccctacacggga
aacatcaccttgaggaaatccttaagtaatcgaggcctctacagtttgtgggttaaagtc
agggaccacggtcaaccagaactctactctaccgttctggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgtgcttcctccagataaggaagggaggaagggcgaacaagtgccaaatctgtgtggc
gagtaccaagtgttactgcttgcactgacggctacctgcttgggattatttctgaccgtt
ttgtcgctggtgatgttcatctgctgcaagaaaaggaaaccaaaaaagaagaggttagag
agtgagattcctttaaatctcatcaaccaagaaatggtggtcaagaacctaatggaaatt
tcaaacatctga

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