Carassius auratus (goldfish): 113055405
Help
Entry
113055405 CDS
T07313
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113055405
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113055405
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113055405
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113055405
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113055405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
DUF4139
FAM176
Pox_I1
Motif
Other DBs
NCBI-GeneID:
113055405
NCBI-ProteinID:
XP_026077489
Ensembl:
ENSCARG00000035499
UniProt:
A0A6P6KZ01
LinkDB
All DBs
Position
36:15805879..15810284
Genome browser
AA seq
883 aa
AA seq
DB search
MWNNKRGTCLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGTLIGAISSDLK
LDLSVNPPRSFNLELKTASQQYVNLNNTTGELFTSALEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKIKIIIEDVNDNRPHFPVGEIRVFVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLVNDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGTPPLLG
TATLRIIIMDVNDNCPKFTESQVNVTLYGNASKGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLFKLIVLANGPTCIPEVAMVTIHVIKQLSG
PPVVIPRYIASEKDGVVSISESEPAFSPIALFTIKNTEPQQKIECLLEGTGPFRLVPYER
FKNEYLLETTELLDYEQQQDYEIVIVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAIDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGALT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKSLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGVLPPDKEGRKGEQVPNLCGEYQVLLLALTATCLGLFLTV
LSLVMFICCKKRKPKKKRLESEIPLNLINQEMVVKNLMEISNI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaataaaaggggaacctgtcttcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcccctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacactcataggggctatcagttcggacttaaaa
ttggatctttccgtcaatcctcctcgctcgttcaatctggagctgaagacggccagccag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgcgctggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaagattaaaatcattatagaggatgtg
aatgacaaccgtccgcatttccctgttggcgaaatcagggtgtttgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtagatcccgacatcgggattcac
agcgttcaaacatactggcttgtaaatgactatggcgttttcacattagacgtagaggag
aacgaaggcggtgaactgacgccgtttctaatcattaccgagtctcttgatagggagacg
caagctgagtatgtgactgacattatagccgaggacggaggcactccgccgcttctaggc
actgcaactctgaggattatcatcatggacgtcaacgacaactgccctaagtttacagag
tcacaagtgaacgttactctttatggaaacgcttctaagggcatgcaactggctcgtcta
caagcctacgatcctgacgagggagccaacgccttgatcacttataccttcagcgaacgg
gtcactcaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcgggaaagattgacaacaacaccgggaaactcttcaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaatggttaccattcatgtcatcaaacagctctctggc
cctccggtggttatcccacgttatattgcgtccgagaaggacggtgttgtgagtataagt
gaatcagagccagcgttttcacccattgctttgtttaccatcaaaaacacagagccacaa
cagaagatagagtgtcttcttgaaggtacaggtccgtttagacttgtaccgtatgagcgt
tttaaaaacgagtacctgcttgagaccaccgagctattggattatgagcagcaacaggat
tatgaaattgttattgtggttcgcaactctcatggattagtagttaacactgtagtgaag
gtccatgtgctggacgttaacgacaatgctccggtcttcaagcaatctttcattgaaatc
acagtggaggagaacaacccgccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggcgctgacgctcccaccattttt
gacttggatcggtcaaccggggtactgacggtgtccacttctcttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagccatagaccgtggcacgccgagaaaggaatcaatc
gccactgtgattatcaccgtccaggatcgcaatgacaacagtccgcggttcatcaacaag
gacttcaccttcttcgtgccggagaactttccaggttttggggaaattggcgctcttact
gttacggatgcagatgctggagagaacggctgggtggcgttgtccattcttaacgggagc
gacatcttcgtgattgacaccggacggggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtactacgtttggatcgaagcaattgacggaggcgaacctgctctt
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgataaccctccaactgtt
cttttccctcagtccaaccagtcgtacatgttggtgcttcccaacacgcttccaggaacg
tctataacggaggtttacgcggtggaccgggacactggaatgaacgctgttattgcgtac
agcatcatcaagagaacagatggagagccaggctcatttgacattgacccctacacggga
aacatcaccttgaggaaatccttaagtaatcgaggcctctacagtttgtgggttaaagtc
agggaccacggtcaaccagaactctactctaccgttctggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgtgcttcctccagataaggaagggaggaagggcgaacaagtgccaaatctgtgtggc
gagtaccaagtgttactgcttgcactgacggctacctgcttgggattatttctgaccgtt
ttgtcgctggtgatgttcatctgctgcaagaaaaggaaaccaaaaaagaagaggttagag
agtgagattcctttaaatctcatcaaccaagaaatggtggtcaagaacctaatggaaatt
tcaaacatctga
DBGET
integrated database retrieval system