Carassius auratus (goldfish): 113055774
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Entry
113055774 CDS
T07313
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113055774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113055774
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113055774
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
113055774
NCBI-ProteinID:
XP_026077907
UniProt:
A0A6P6L2Q0
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Position
37:129215..168374
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AA seq
1236 aa
AA seq
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MIPTKMLVYRSPDGATRTEALPNTRRRKKSCGELFHNGYRVKMLHAPVCERHERDDCHHT
LSSCLHAVSYWGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFI
HLVENSGDPWENFQNSQPLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLA
MFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNV
EIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADP
DAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGF
IAQSCLAQGLSTMLANLFSMRSYIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPAV
CELCYVKLKLLLIAIEYKSDQRESRGGKCTLINPGNHVKMQEGTLGFFIASDAKEVKRAL
FYCKACHDDITDPKRIKKCGCKRTKKSAYKRMRLACCVACGGAEHGCSCMSDSVASNMEV
LQRGFPFSPVSLYDNTTTLRSSKSNYNGYIKSINDEINPTFLPQNPKPSLMRVQCAVRAP
PAVPGVRVSVPLVNNRKDSLLSPAALYLHRLSLASSRELYQSSSADATRLHRACSLPVRY
RYHSSHGSSSTIGSHTLLVEEEQQSALSPKKKQRNGGMRTSPTCSPKVIRHDPLLVPGHD
QMETMDENIKRYDSTGMFHWCPSKDIEKVMLTRSEAAMTVLSGHVVVCIFGDVKSALIGL
RNLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKISILPGTPLSRADLRAVNI
NLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRS
SPENSPVHGLVRQMSITTGANIPIITELAKTDKVLPLVSLSQDKSSGNNIPMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHLGAPSQCNKRYVITNPPYVFELVPTDLIFCLMQFDHNAGQTRSNL
SSHSTYCPSKKSPSTLSIPSSARPGRSRSRDPRDKQNVPRTNRAVSDKNWYTDEPENCFP
RNTQSKHTNTHAANQINQYKSTSSIIQPIREVEEEP
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgactaagatgttggtgtacaggagccctgacggggccacgcgcaccgaggcc
ctcccgaacacacgcagacgcaagaagtcctgcggcgagctctttcacaacggctaccgt
gtgaagatgctccacgcgccggtctgtgagagacacgagcgtgacgactgtcaccacacg
ctgtcctcctgtctccatgccgtctcgtactggggactgaggttcttaagagccttgagg
ctgatccagttttcagaaatattacagtttttaaacatcttaaaaacaagcaactccata
aagttggtgaatctgtgctcaatctttataagcacatggctgacggctgcgggcttcata
catttggtggaaaactcaggggatccttgggaaaacttccagaattcccaaccgctttcc
tactgggagtgtgtgtacttactcatggtaaccatgtccacagtgggatatggagatgtg
tgtgctaaaacaaccctcggacgccttttcatggtcttcttcattctcggaggattggcc
atgtttgccagctacgttcctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagcgcagtgaatgggagaaagcatatagtcgtctgcggtcacatcacactg
gagagcgtctccaacttcctcaaagacttcctacacaaggacagggatgatgtcaatgta
gaaatcgtttttctccataatatttcccctaatcttgagctggaagccttattcaagaga
cacttcacacaggtggagttttaccagggatctgtcctcaaccctcacgatctcgctcga
gttaagattgagtcggccgatgcctgtcttatcttagccaataaatactgtgcagatcct
gacgctgaagatgcatccaatatcatgagggtgatatccattaaaaactatcatccgaag
atccgaatcatcacacagatgctgcagtaccacaataaggctcatcttctgaacatcccg
agctggaactggaaggaaggcgatgacgccatctgtctcgccgagctaaagctgggcttc
atcgctcagagctgtctggcacagggtctgtccaccatgctggccaacctcttctccatg
aggtcctacatcaagattgaagaagacacatggcagaagtattatttagagggagtatcc
aatgaaatgtacacggagtatctgtccagtgctttcgtggggctgtccttccccgctgtt
tgtgagctctgctacgtgaagctgaaactgctgctgatcgcgattgaatataaatcagac
caaagagagagcaggggtggaaaatgcacgctaattaacccaggcaatcatgtgaagatg
caggaaggaacgctgggcttcttcatcgccagtgatgccaaagaggtgaagagggcactt
ttctactgtaaagcttgtcatgatgacattacagacccaaaacggatcaaaaagtgtgga
tgcaaacggaccaagaagtctgcctacaagagaatgcgtctggcatgttgtgtagcttgc
ggtggggcagaacatggctgctcgtgcatgtcagacagtgtggctagtaacatggaggtt
ctgcaacgtggcttccccttctctcccgtgtctctgtatgataacacgaccactttacgc
tcgtctaaaagtaactataatggatacatcaaatcaataaatgatgagatcaatccaaca
ttcctgccccagaatcccaaacccagcctaatgcgagttcagtgtgcagtgagagcgcct
cctgctgtcccgggtgtccgtgtgtcagtgcctttagtaaataaccgtaaagacagtcta
ctgtctccggctgccttatacctgcacagactgagtctggccagctccagagagctgtat
cagagcagcagcgctgatgccacccgcctgcatcgagcctgtagtctgcctgttagatac
agatatcattccagccacggctccagctccaccatcggctcgcacacgctcttagtggag
gaggagcagcagtcggctctgtcgcccaagaaaaaacagcgtaacggagggatgagaacg
tcgcccacatgctcgcccaaagtcatcaggcacgacccgttgttggtcccaggtcacgat
caaatggaaacaatggatgagaacataaagagatatgattcgacaggaatgtttcactgg
tgcccatcaaaagacatagagaaggtcatgctgactcgcagcgaggcggccatgacggtt
ctgagcggtcacgtggtggtgtgtatttttggcgatgtgaagtcggctctgattggtctg
cgtaacctggtgatgcctctgagagccagtaacttccactatcacgagctgaagcccatc
gtgttcgtgggctctctggagtatctgaagagagagtgggagacgctacacaacttcccc
aaaatctccatcttacccgggactccactgagtcgggccgatctgagagccgtcaacatc
aacctgtgtgacatgtgcgtcatcctctcggccaatcagaacaacatcgacgacgcctct
ctgcaggataaggagtgtattctggcgtccctcaacatcaagtccatgcagtttgatgac
agtattggactcctgcaggccaactctcaaggtttcactcctccaggaatggatcgctcg
tctccagagaacagtcccgtacacggattggtgcggcagatgtccataaccaccggagct
aacattcccatcatcacagagctcgctaaaacagacaaggtgctgcccctggtttctctg
agccaggacaagagcagcgggaacaacatcccgatgataacggagctggtgaacgactca
aacgtccagtttctggaccaggatgatgacgatgaccccgacacggagctgtacctcacg
cagccgttcgcctgtgggacagcgttcgccgtcagtgtgctggattcattaatgagtgcc
acgtacttcaatgacaatattctgaccctgatccggacactggtgaccggtggagcgacg
ccggagctggagggtctgctggcggaggagaacgcactgcgtggaggatacagcacaccg
cagacactggccaacagagaccgatgccgcgtcgcacagctggcgctttacgacggaccc
ttcgctgatctcggggatgggggatgttatggtgatttgttctgtaaagcgttgaagacg
tacaacatgttgtgttttgggatctaccgattaagagacgcacatctgggagcacccagc
cagtgcaacaaacgatacgtgatcacgaatcctccgtacgtcttcgagctggtgcctaca
gatctgatcttctgcctgatgcagttcgaccacaacgccggccagacgcgctccaacctg
tcgtctcactccacctactgcccgagcaagaagagcccgtccaccctctccatcccctca
tccgcccggccgggacgcagccggagccgagacccgcgcgacaaacagaatgtgcccagg
acgaatagagcagtttcagataaaaactggtacacagatgaacccgagaactgcttccca
agaaacacgcaaagcaaacacaccaacacacacgcagccaatcagatcaatcagtacaaa
tccaccagcagcatcatccagccaatcagagaagtggaggaggagccttga
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