Carassius auratus (goldfish): 113055942
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Entry
113055942 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8-like
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113055942
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113055942
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113055942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
DUF3287
zf-RING_5
RING_XB3-XBAT31
Trm112p
FliD_C
Motif
Other DBs
NCBI-GeneID:
113055942
NCBI-ProteinID:
XP_026078120
Ensembl:
ENSCARG00000016279
UniProt:
A0A6P6L0R3
LinkDB
All DBs
Position
37:4855642..4865628
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AA seq
564 aa
AA seq
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MAENWKNCLEEELICPICLNVFSEPVQLPCKHNFCRMCINEAWSKDTGMVRCPECNHAYS
QKPALEKNHKLSNIVEKFNALNVEKTPAVLHCILCRRGPPLQAQKVCLRCNAPCCHSHVQ
THLQQPSSNAGHLLVDAEDVRAWSCPQHDEYRLYHCETEHVAVCQYCCFSRCATNHGHAV
CDIEVRRNDIRQMLIKQQDRIEDRVQDIEEQLYKLESDKCLMEDKVQNLKEEVQLQYQKM
QQLLEEDLGKTLEVLDKAHSKFCQENSAQALQLHQKQQEAKKLLSSIQMVFDKAEDIGFM
KNTKSVKILMDRSQPYVGSTLSPYKVGSLNSKLFLSEISKREKNLCKMLEAPFSAPANFF
QSIPAYLCEKRRHSVAFPEGSGSTRAGASFMDSSSSSGPVAAKQPCLSLTQGSAPGEGQS
SQQALGPCGSTQHVGSSSSASGSQTLPHSASVFPHSHYPNGSSSQLSQYGARKILMCTVD
NCYCSGVPSVSNHRGHPPYPRSSSFPWPVSSQEYSHAPLPSAPAMSQSLQSLSMRDWIDA
SQSHRHADFYSLYGQSSTKHYVTS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaactggaagaactgtctggaagaggagctcatatgtcctatctgtttaaac
gtcttctcggagccggttcagctcccttgcaaacacaacttctgccgcatgtgtatcaat
gaggcctggtctaaagacacaggaatggttcgctgtcccgaatgcaaccatgcctacagc
caaaaaccagctctggagaagaaccacaaattgtccaacattgtggagaagtttaatgcg
ttaaacgttgagaagactcctgcggtcttgcactgcattctgtgccggcgcggccctccg
cttcaagcccagaaggtttgcctccggtgcaatgcgccctgctgccattcccatgtacag
acccatctccaacaaccctcttccaatgctggacacttactggtggacgccgaggacgtg
cgggcctggagctgtccacagcacgatgagtacagactatatcattgtgaaaccgagcat
gtggccgtatgccaatactgctgcttctccagatgtgctaccaaccatggccacgcggtg
tgcgatatagaagtcagacgtaacgatatcagacaaatgctgatcaaacagcaggatcga
attgaagaccgggttcaggacatagaagagcagctctacaaattagaatcggacaaatgt
ctcatggaggacaaagtgcagaacctgaaagaggaggtgcagctgcagtatcagaaaatg
cagcagctcttggaggaggatctggggaagaccctagaggtcctggataaggcccattcc
aagttctgccaggagaactccgcgcaggccctgcagcttcaccagaaacagcaggaggct
aagaaactgctcagctccatccagatggttttcgataaggccgaggacatcggttttatg
aagaacacaaaatctgtgaaaatactaatggacaggtctcaaccgtatgtgggcagcaca
ttgtcaccatacaaagtgggcagtctcaactccaaactctttctgtctgaaatctctaaa
agagagaagaacctctgcaagatgctggaagctccgttcagtgctcctgcaaactttttc
cagagtattccggcgtacctgtgcgagaagcgcaggcattcagtggcgttccctgaaggc
agcggcagcacccgagcaggcgctagcttcatggactcttcctcctcatcaggccctgtg
gctgccaagcagccgtgcctgagtctcactcagggctctgccccaggcgaaggtcagtcc
tcccagcaagctctagggccatgtggctccacccaacacgtcggaagcagcagctcagcc
tccggctcccaaaccttaccgcactctgcctcggtattcccacattcccattacccaaac
ggcagctcttcccagctgtcccaatatggagcgcggaagatcttgatgtgcacagtcgat
aactgttactgctcaggggtgccctctgtgtccaatcaccgcggacatcctccttaccct
cgctccagctccttcccctggccagtaagctcgcaggaatactcccatgcccccctgccc
tcggccccggccatgtcccagtctctccagagcctgtccatgcgtgactggattgatgcc
tctcagtcacacaggcacgctgacttctacagcctctacggtcagtcttccaccaagcat
tacgtcaccagttaa
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