Carassius auratus (goldfish): 113056030
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Entry
113056030 CDS
T07313
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113056030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113056030
03012 Translation factors [BR:
caua03012
]
113056030
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113056030
Translation factors [BR:
caua03012
]
Eukaryotic type
Release factors
113056030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
113056030
NCBI-ProteinID:
XP_026078266
Ensembl:
ENSCARG00000024590
UniProt:
A0A6P6L429
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Position
37:complement(7374970..7382082)
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AA seq
564 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVDAAEFVPSFVSRGSPGDATSDDTDAV
ASMEISEPVAAVENGETDDSAVETWEQKGEPDEEEPESGSPTDTGFCGDEAQDEIMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKESSELCPWYTGLPFIPHLDSLPIFN
RSSDGPIRLSIVDKYKDMGTVVLGKLESGSIMKAQQLIMMPNRHTVEVLSLLSDDVETDY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccctgattcgtgggaacaggaggacgatgtcgaggccacg
gctgataccgagcttcagtccgccttcaccgggctcaacgtggacgctgcggaattcgta
ccatcctttgtttcccgaggttcaccgggagacgccacgtctgatgacaccgatgcagtg
gccagcatggagatctcagaaccagtggctgcggttgagaatggagagacggatgacagt
gcagtggagacgtgggagcagaaaggagagccggatgaggaggaaccagaaagtggatcc
ccgacggacacaggattttgtggggatgaggcacaggacgaaattatggaggaggatgag
gagatgccgactcccaagctgcctcctcctccaccggacgcccctaagaaagaacacgtg
aatgtagtgttcataggacacgtggatgcaggcaagtctacaattggtggacagattatg
tatctaactggtatggtggacaaacgaacgctggagaaatatgaacgggaggcaaaagag
aagaatagagagacctggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcttactttgaaactgagaaaaagcactttact
attcttgatgccccaggccataaaagctttgtacccaacatgattggaggggcatcccaa
gctgacttggcagtgctggtcatctctgccagaaaaggcgagtttgagaccggttttgaa
aaggggggtcagacaagggagcacgccatgctggccaaaaccgctggagtcaaacatttg
atagtcctcatcaacaaaatggacgatcccactgtgaactggagtttggatagatacgag
gaatgtaaagagaagttagtgccatttctgaagaaggtgggctttaatccgaagaaagac
attcacttcatgccctgctctggaatgactggagccaacctgaaagaatcttctgagctg
tgcccttggtacacggggttaccgttcattccacatctggacagcctgccaatcttcaac
agatctagtgatggtcccatccgattatctattgtggataaatacaaggacatgggcacc
gtggtgcttggaaaactggaatctggaagtatcatgaaagcacaacagcttattatgatg
ccaaataggcacacggtggaagtgttgagccttctctcagatgatgtggaaacggattac
gccggacctggcgaaaacctgaagctccggctcaaaggcatcgaggaggaagagattctc
ccaggctttatcctatgcaatgctgagaacctctgccactcagggcgcacttttgatgcc
cagattgtcattattgaacacaaatccataatatgcccaggttacaatgcagtactacac
atccatacctgcatagaagaagtgcagataacagcgttaatctgtctggtggacaagaag
acaggagacaagagcaagactcgcccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagggccgcaggaactatctgcttagagacttttaaagactttcctcagatggga
cgtttcaccttaagagatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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