Carassius auratus (goldfish): 113056036
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Entry
113056036 CDS
T07313
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113056036
03036 Chromosome and associated proteins [BR:
caua03036
]
113056036
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113056036
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113056036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
113056036
NCBI-ProteinID:
XP_026078274
Ensembl:
ENSCARG00000025482
UniProt:
A0A6P6L160
LinkDB
All DBs
Position
37:complement(7412018..7427756)
Genome browser
AA seq
1999 aa
AA seq
DB search
MEDKKRKKEDKRKREASQKVAEQKNKVPELTKPPSAQSPATPNSASPSPGPVPSSTPSTA
TPAAGALPQGGNNAKRPVVANGQPSPGTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASEVMQVWNGIDPSEGPVGPAAPSLPHTPSSSSIAASSN
YANSMWGTSSGSQPLSQGREKVIVDRSDLEEWPSIAAGDGSKVMDTTGTGGADSSGILNC
STSWGERHLQQQGKVVGGGNGRKGVNSGSPSPPASSGSPNECMQSGSVWASSSHELIGGN
AVAAGSLPPISKVAPLSVSSDSSLGVSCGIPGANFTPNANPSAWPALGQEGAGTVATEGG
SSSLQSSSLSASNPLSVNQASHQHQLHQMQSRDREPPCGEWGGAALEPGAGPKNTGVAEG
ADMDSGSTGGGDGSTSSSSSASSSLWKAQPFPAISKTGASRTESWEDGAGGSSVSAEGGK
AWVITGQDDRGDLTGASAWGTASGGQTPGVSQGAWDGDHMLVGEWGASSGVGRVSNPVGK
DGSSSNSSSSGSAGKPTTSSSTPSTMTRAWDNQKGVGDVGAGESSEWGGQGSRGGGGTSS
SSGGGNSRSGNQRHGYHRSHQPPNPEVALQNLLSRSDLDPRVLSNSGWGQKQIRQNVAWD
LEGGGGAAAPGGADSSPTMSAPAHAQPYSGSSGTTTTDLSSSSLLQGAALNANLNSNSIL
GPAAVSHGEVWDNSSSNTSSSLHARGPPPSGVNIQNPGVSQSVGGVGSSAGGQGKPSGGW
GGTASSEGQAKSWDSEGHDWRGQSSSGGWGNFQTQGTPSTGGSGWEDIQEDKVTDSWKEK
RRGDAGNWGTRGSSDWVENEPISCSGSWGDGKSGGGTSGDSEVGTWGNWDEEPARGSWGT
GGTGVGREMGGKSHQGWGGKMHPSQMPNSQSASQKGPAQQQQQQSQPQSCQSVDTGAMQG
GWGRPAGPSAQSQSSGWTSGPIPNISSGPIDNLEPSGWEEPSPQSINRKMEIDDGTSAWG
DPSSYNKTVNLWDKNNAPSGQAQSVSPQQGPPTLQQQPPGRMLTGLGNRDMNLAHSTNKG
PVVASSGWGGSGSPSSPCVDNGTAAWGKPTDAPTSLGNPDDTGKASSWGDPSPNPVKSGS
KSMQDGWGEGEGSVSASRHSSWDEEEESGCVWNSTGSQGSSSSYNSGGWGAKKGNKGSLK
GAGDSWMNPMTRQFSNMGILGEDHSGRSLDLAPGPPQDKKMEAEKRGMGLNEYNGEMRKG
GRGGGAGSVFRSPGSKEVGACEPGSYYDKTSGQLFSSGGGMAQARHQPGVPPINPSVRAQ
VPHQFLSPQVPGSVLKQMPPPSGGVGGVGGGIFPPQLSPQHIAMLSSIYPHHIQFQLACQ
LLLQQQPQQQQQQQLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQHMGGTGGSSK
LSPSHLGGSGPKMPMSDTLTHPGLAGSVADLHQKTQGNYSGFGPGVSLSGLELGPMVGGP
AGLKDNVGQQSRFKWMMEGHSPAPSPPDSTLHKNGPIAAPLKMRGGSPYSQYEMLGGESL
GVPSQGPSDHWHRSPGNKMGAKTGTSSWPPEFQPGVPWKGIQSVDPESDPYMTPGSMLGS
SMSSLNDNEHQLLRDNTESNPSFNTLLPSPGAWPYSASESPLNNAHNQAKYTDYKPSWPL
EPIGHNKHWKTNRNSSYMSRPPPGLTHQKQPSVSPWSGGGPRMGRGWGGSGGGQENRFGP
GSAWSDGGASKGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQ
EAAKAQSALHMCVLGNTTILAEFVSEEEVARYFAHSQTGAGGSGSGGSGAGGVADSGQAG
VTGSSGAGAVGTISAGSGERERAGVGSLTSGGSNNSGGTGPSGSSWQSLEGTGSSPDPAS
AQGAGLSIFAQWSSNGAGGGVGGNTGGVDPGRAGLWGGMTPGYTSSSLWGSPAMEDRHQM
SSPAALLPGDLLGGGADSI
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaagcctcacagaaggtt
gcagaacaaaaaaataaagtgccagaattgaccaagcctccatctgcacagtctcctgcc
acccccaactcagcttcccccagccctggccctgtcccttcttcaaccccatccactgcc
accccggctgctggcgctctccctcagggtgggaacaatgctaagcggccggtggtggcc
aacggacagccctcccccggcacacagaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactg
tcctccatgctgctggggggaggcaacagcgggggcgacagccccaatgaaacagtggct
tctgcatcagaagttatgcaggtttggaatggcatagatccaagcgagggccctgtgggt
ccagctgctccctcactgccccatacgccgtcatcctcatcaatcgctgcttcttcaaat
tatgcaaattccatgtgggggaccagctctggcagccaacccctctctcagggcagggaa
aaggtgatagtggaccggtcagacctggaggaatggcctagtattgctgctggagatggg
tcaaaggtgatggatacaacaggtaccggaggtgcagacagtagcggaattctgaactgc
agcacctcatggggtgagaggcatctccagcagcaaggaaaagttgtgggaggaggaaat
gggaggaaaggagtgaattctggcagcccctccccacccgcatcctccggttcaccaaat
gaatgtatgcagtctggtagtgtttgggcttcatcctcccatgaactcataggggggaat
gcagtagcagcaggctcattgcccccaatatccaaagttgcccctctctcagtgagctcc
gatagctcccttggtgttagctgtgggattccaggtgccaattttacccctaatgccaat
ccctctgcttggccagccctgggacaggaaggagctgggacagttgcaacagagggtggg
tcctcttctctccaaagctcatctttgtctgccagcaaccctctttctgtgaatcaagcc
tctcatcagcaccaacttcaccaaatgcaatccagagacagagagccaccctgtggagag
tggggtggtgcagcactggaaccaggagcaggaccaaaaaacacaggggtggcagagggg
gctgatatggactctggaagcacaggtggaggagatggctccacttcctcttcctcctct
gccagctcatcattgtggaaagctcagcctttccctgcaatctccaaaacaggtgcctca
aggactgaatcttgggaggatggagcaggagggagctctgtgtctgctgaaggcgggaaa
gcctgggttattaccggtcaggatgatcgaggtgatttgactggggcaagtgcgtgggga
acagcaagtgggggtcagacccccggagtatctcagggagcgtgggatggggaccatatg
ttggttggggagtggggggcatctagtggtgttgggagggtcagcaacccagttgggaag
gacggttcgagcagtaacagcagcagcagtggtagtgccggtaaaccgacgacttcctcc
tccacaccttcaactatgacaagagcttgggacaatcagaaaggagttggggatgtggga
gcaggggaatcaagtgagtggggaggccagggtagcagaggtgggggaggtacctcatcc
tccagtggtggaggaaactctagaagtggcaatcagcgccatggataccaccgctctcat
caacctcccaaccctgaagtggccttacagaatctgcttagccggtctgacctggacccc
agagtgctgtccaactctggttggggtcagaagcaaatccggcagaatgtggcatgggat
ttggagggaggtggcggagcagcagcaccaggtggagcagactcttcacctacaatgagt
gcacctgcccacgctcaaccgtactctggttcttctggcaccacaactactgatctatct
tcctcctctctgctccaaggtgcagctctgaatgccaacttaaactccaactccatcctc
gggccagccgctgtttcacatggtgaagtttgggataacagtagtagcaacaccagttct
tctttgcatgcccgaggccctccaccctcgggtgtcaatatccaaaaccctggcgtctca
caatctgtaggtggagtaggtagttcagctggtggacaaggcaagccatctgggggttgg
ggagggactgcttcatcagaaggccaagcgaaaagttgggacagcgagggacatgattgg
cgaggacaaagctcctcaggtgggtggggaaatttccaaacacagggtactccatcaact
ggaggaagtggctgggaagacattcaagaggataaagtaacagacagttggaaagaaaag
agacggggggatgcaggcaattggggaacaagaggaagcagcgactgggtggagaatgag
cccatatcatgcagtgggagctggggggatgggaagagtggtggaggtactagtggggac
tcagaagtgggtacatggggtaattgggatgaggaacctgcaagagggtcatggggaact
ggaggtacaggggtgggtagagaaatgggtggcaaatctcaccaaggctggggtgggaag
atgcacccatcacagatgccaaacagccagtcggcctcacagaaaggcccggcacaacag
cagcaacaacaatcacagcctcaatcgtgtcagtcagtggacacaggggccatgcaaggg
ggctggggaagaccagcaggtccttcagcccagagccaaagttcagggtggacttcaggg
cccatacccaatatttccagtggccctatagacaatttagagcctagtggttgggaggag
ccttctccacagtccatcaacaggaaaatggagattgatgatggaacatctgcttggggt
gaccccagcagctacaacaaaactgtcaacttgtgggataagaacaatgccccatctggc
caggcacaatcagtgtcccctcagcaaggacccccaaccttacagcagcagccacctgga
agaatgctaacaggcctcgggaatagggacatgaaccttgcacattcaacaaacaagggg
ccagtagtagcttcctctggatggggaggtagtggctctccttccagtccatgtgtggac
aacggaactgcagcctggggtaaacctactgatgcacccactagtttgggcaaccccgat
gacactggcaaggcatcaagttggggggacccctctcccaatccagtgaaatctggttca
aagtctatgcaagatggttggggtgaaggagagggctcagtcagtgcttcacgtcactcc
agctgggatgaggaggaagagagtggttgtgtatggaatagcactggttcccaaggcagt
agctcatcctacaactctggaggctggggagccaagaagggcaacaagggttccttgaag
ggtgcgggagactcttggatgaacccaatgacaagacagttttcaaacatgggaattctg
ggagaggaccacagtggtcgttctttggatctggcccctggtcctccgcaggacaaaaag
atggaagcagagaagcgtggcatgggcttaaatgagtacaatggagagatgcgtaaagga
ggacgtggagggggagcaggatcagtcttccgttcacctggttccaaagaggtgggggca
tgtgaacctgggtcttactatgacaagacgagtggtcagttgtttagtagcggaggtggg
atggcacaagccaggcaccaaccaggggtacctcctatcaacccatcagtaagagcgcaa
gtgcctcatcagttcctgtcaccgcaggtgccaggctctgtgctgaagcagatgcctcct
cccagtggaggtgttgggggtgttgggggaggcatctttcctccacagctttccccacag
cacattgccatgctcagcagcatatatccccatcatattcagttccaactggcctgccag
ctgctacttcaacagcaaccacagcaacaacaacaacagcagctgctgcagaaccagcgc
aagttccccccaaacatacgtcaacaggcagacccacaacaacttgctagaatcatggct
gttctccagcagcagagacaacagcagcagcatatgggaggtacaggaggcagctccaaa
ctctctccttctcaccttggtggtagtggcccaaagatgccaatgtcagacaccctcaca
caccctggcttggcaggatctgtagcagacctgcatcaaaaaacacaaggaaattattct
gggtttgggcctggagtgagcctctctggtctggaattgggtcccatggttggtggccca
gctgggcttaaagacaatgtggggcagcagtctcgtttcaagtggatgatggaaggtcat
tccccagccccatcacctcctgatagcactctccataaaaatggtcccatcgctgctccc
ctcaaaatgagaggtggttccccatactcccagtatgagatgctgggaggtgagagtttg
ggtgtgccttcacaagggccgtcagatcactggcacagaagtcctggaaacaagatgggc
gccaagactggcacatccagctggcctccagagttccagccaggagtgccttggaaagga
attcagagcgtggaccctgaatctgatccttacatgacccctggaagtatgctgggctca
tcaatgtcaagcctgaacgacaacgagcaccagttgctaagagacaacacagaatcaaat
ccctccttcaacaccttgctgccttcacctggtgcctggccctacagtgcctcagagagc
cccctcaacaatgcacacaaccaagctaagtacacagactacaagcccagctggccactt
gagccaataggacacaacaaacattggaagaccaatcgcaacagctcttatatgtcacgc
ccacctcctggactgacccaccagaaacagccctccgtttctccttggtcaggaggaggc
ccacgaatgggtagaggctggggtggctctggaggcggccaagaaaaccgatttgggcct
ggttctgcgtggagtgatggaggagcctctaaggggagctgctggctggtgttgagtaat
cttacccctcagattgatggctccactttgaggactatctgtatgcagcatggtccgctt
ttgacctttcacctcggtttgactcaaggcagtgctctgattcgctacagtacacgccaa
gaagcagccaaagctcagagcgcacttcacatgtgtgttttaggtaacaccacaatcctt
gccgagtttgtgagtgaggaagaggttgctcgctattttgcacattcccagactggagct
ggcggaagcggcagcggaggcagtggagccggtggtgtggctgactccgggcaggcaggc
gtgacggggtcatcgggggccggggctgtgggtaccatcagcgctgggagtggcgagcga
gaacgggctggagtaggaagtttgacgtcaggaggaagcaacaacagcggtggaaccggg
ccctctggatcttcctggcagagtttggaaggtacgggcagctcccctgacccagcctct
gcccagggagcaggcctaagtattttcgcccagtggagcagcaatggtgctggtggcggc
gtgggaggcaacacgggcggcgttgatcctggcagggcggggttgtggggcggcatgact
ccagggtacacaagcagcagtctgtgggggtctccggccatggaagatcggcaccagatg
agcagccctgcagcgctgctgcctggagacctgctgggaggaggtgcagactctatctga
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integrated database retrieval system
