Carassius auratus (goldfish): 113056169
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Entry
113056169 CDS
T07313
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113056169
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
113056169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-met
zf-C2H2_15
DUF6801
zf-C2H2_6
Homeodomain
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
113056169
NCBI-ProteinID:
XP_026078518
Ensembl:
ENSCARG00000051305
UniProt:
A0A6P6L1U5
LinkDB
All DBs
Position
37:complement(10760025..10818288)
Genome browser
AA seq
1099 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNEERNSGLEQHDVSNYSHVLEGQSDSDDEDKLHIVEEEGSLL
DGADCDSVAPDEDPNGTVDPDSRWDDVKEECVSDEDERSRDALVEEMLQQGDTTVIFPEA
PEDEPRQGTPETSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSC
SLCSYTFAYRTQLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECSNCKKRFSHSGSYSSHISSKKCIGLISVNGRPQTSPATGAAKTPQCSSPS
LPTSSPTARVQVRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGINGMFQGGA
AAPLQGAVQAVVLPTVGLVSPISINLGDLQNVLKVAVDGNIIRQVLESTQAKGQQAGTGI
IGAGGVGIAQATQQVIQAISLPILDQDGTAKIYINYSLDPSQAQALLQSPKKEPLVLNTE
ACKAQKLPEDLTVKTNRDKTTITVDKKNILHNDTTLKHCGKDGHRVNGKNLDGKIDLEEG
LCPGQPTLKNLLTLLKAYNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISLDPSSPL
AEDEQTTPGDLDGTRGESPRPELDKQINSEEQGERECCSPAEGLAARENGIESVPTSPSP
LNLSADGPVPARTLEEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKELLS
NASTNAAIYASQPSANPINIVTTQLPTLLAITDQGQAQCLRALTTTKQTILIPQLTYSYT
TTSSSPAGNDTPQKNVIHVNGIKEEKQEMGSEVTSTLEEQTDSDSGPTRKKMKRTESGLY
ACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDK
CGKRFSHSGSYSQHMNHRYSYCKKEAKGQGLGQGVEEEDNTGEGQPQTGSTATSPPSHLD
SDERGSSTREDESEEEDDIGSGSLVDEDEIQVVKIGEEGDEDDQGADEDQEGERMEGAEQ
EDGDEEGESEENDGQTLKVVVMQDECEDENGEEEQSAQEAMDTGTHEHTKDTTERENPED
DERRIENEENTATMNGDVK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgaa
gaaagaaattcaggtttggaacaacatgatgtgagtaactacagtcatgtgctggagggc
cagtcagactcagatgatgaagataagcttcacatcgtggaggaggaagggagtctcttg
gacggggctgactgtgacagtgtggcccctgatgaggaccctaatgggaccgtcgaccct
gacagtagatgggatgatgtgaaagaggagtgtgtgtcagatgaggatgagaggagcaga
gatgctttggttgaggagatgctccagcaaggagacacgaccgtcatcttcccggaggct
ccagaagacgaaccgcgacagggcacgccagaaaccagcggacatgatgaaaatggcacg
ccagactcattttctcagcttcttacatgtccctattgctctcgtggctacaagcgttac
acctcactgaaggagcacattaaatacagacacgagaagagcgaggacaacttcagctgc
tctctctgcagctacacatttgcctatcgaacacagcttgacagacacatgactgcacac
aaagctggccgagaacagcggcatgttactcagtcaggtggaggagggaatcgaaagttt
aaatgcactgaatgtggcaaagccttcaagtacaaacaccacctgaaagaacacctgcgc
atccacagtggagaaaagccttatgagtgctccaactgcaagaagcgtttctctcattca
gggtcctacagttcccacatcagcagtaagaagtgcattggcctcatctcagtaaacggg
cggccgcaaacttctcccgccaccggggctgctaagacccctcagtgctcttccccatcc
ctgccaacctcttcccccacggcccgtgtccaagtcagagacaaactggacaatagcaaa
ccccttcaggaacagcttcccttgacacagatcaagtctgagccactggactatgagtac
aagcctgtggtggtggccccatctgctagaggaataaatggcatgttccagggtggggcg
gcagcccctcttcagggtgctgtacaggctgttgtgctcccaacagtgggtctagtatcc
ccaatcagcatcaacctgggggacttacagaacgtgctgaaggtggcagtggatgggaac
atcatcaggcaagtgctggaaagcacgcaagctaaggggcagcaagcagggacaggaatc
attggagcaggaggggtgggaattgcccaagcaacccagcaagtcatacaggccattagt
cttcccatcttagatcaggatggcactgcgaagatctacatcaactacagtcttgaccct
tcacaggcccaagcacttcttcaaagtccaaagaaggaacctttggtgttgaacactgaa
gcctgcaaggcacagaagctgccagaggacctgacggtcaagactaatagggacaaaacc
accatcactgtggacaagaaaaacattttacacaatgacacaacacttaagcactgtggt
aaagatggacacagggtaaatgggaaaaaccttgatgggaagatagacttagaggaagga
ctgtgtcctggccagcctaccctgaagaaccttctcaccttgctcaaggcttacaacgag
cccaccaaggaggagctggcaaagatatccgagtctgtcagtcttccagcagaggtggtg
aagaagtggtttgagaagatgcagttgggacagatatctctagatccctcctccccccta
gctgaggatgagcagaccactcctggggatttggatgggactagaggtgaatcacccaga
ccagagctggataagcaaattaactcagaggagcaaggagagagggaatgctgtagccca
gctgagggcctagcagctagggagaatgggatcgagagtgtccctacatccccatcacca
ttaaacctatcggccgatggtcctgtcccagccaggactcttgaggaaggcgagggacct
ctcgatttgtcgctaccaaaatctgctgctacagctgctgtggctagcggtcacgtaaac
actgtttactcggctcaagaggagccactgaatttaacttgcacaaaggaactgctcagc
aatgcaagcaccaatgctgccatatatgccagccaaccaagtgccaatcccattaacatc
gtgaccactcaactgcccaccctattggctatcactgaccagggacaagcgcaatgtctc
cgtgcacttaccaccactaaacagaccatcctgattccgcagctgacttacagttacacc
actacatcctccagcccagcagggaacgacacaccacagaagaatgttatacacgtcaat
ggcatcaaggaagagaaacaggaaatgggttcagaggtcacctcaacattggaagaacaa
acagactcagactcagggccgacgaggaagaagatgaaaaggacggagagtggcctgtac
gcctgtgacctgtgtgacaaaatcttccagaagagcagttcactgctccgccataaatat
gaacacacaggaaaaaggcctcatgaatgtgggatctgcagcaaggccttcaaacacaag
caccacctaatagaacacctgcgcctgcactccggagaaaagccgtaccaatgcgacaag
tgtggaaaacgcttctcccactctggctcctactcacaacacatgaaccaccgatactcc
tactgtaagaaagaggctaaaggtcaaggtctaggccagggagtcgaggaagaggacaat
actggagaggggcagcctcaaacgggcagcacagcgacctcacccccttcccacctggat
tcggatgagcgggggagtagtaccagagaggatgagagcgaggaggaggatgatataggc
tcggggagcttagtggacgaggatgagattcaggtggtcaagattggagaggagggagat
gaagacgaccagggagcagatgaagaccaggaaggagagaggatggaaggggcggaacaa
gaagatggtgacgaggaaggcgagagtgaggaaaatgacggacagacgctgaaagtcgta
gtaatgcaggatgaatgtgaagacgaaaacggagaggaggagcaatcggcgcaggaggcc
atggacacaggaactcatgaacacacgaaggacacaacagaaagagagaacccagaggat
gatgagagaaggattgaaaatgaagaaaacacagccactatgaatggagacgtgaagtga
DBGET
integrated database retrieval system
